EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000010622 (Gene tree)
Gene ID: -
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 113342 bases
Position: chrQEPC01004358.1:1180663-1294004
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000014276	ResIII	PF04851.15	2.9e-08	1	1
ENSSPUP00000014406	ResIII	PF04851.15	3e-08	1	1
ENSSPUP00000014318	ResIII	PF04851.15	3e-08	1	1
ENSSPUP00000014396	ResIII	PF04851.15	3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000015362	CHD5-203	5493	-	ENSSPUP00000014396	1830 (aa)	-	-
ENSSPUT00000015277	CHD5-202	5469	-	ENSSPUP00000014318	1822 (aa)	-	-
ENSSPUT00000015227	CHD5-201	5400	-	ENSSPUP00000014276	1799 (aa)	-	-
ENSSPUT00000015373	CHD5-204	5430	-	ENSSPUP00000014406	1809 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000010622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000010622's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000010622	CHD5	95	65.845	ENSSPUG00000015131	-	95	65.949

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000010622	CHD5	98	81.168	ENSG00000116254	CHD5	97	81.345	Homo_sapiens
ENSSPUG00000010622	CHD5	98	80.251	ENSAMEG00000009880	CHD5	98	80.985	Ailuropoda_melanoleuca
ENSSPUG00000010622	CHD5	89	87.179	ENSACIG00000012582	chd5	99	72.243	Amphilophus_citrinellus
ENSSPUG00000010622	CHD5	91	79.845	ENSAOCG00000020356	chd5	93	73.537	Amphiprion_ocellaris
ENSSPUG00000010622	CHD5	96	75.478	ENSAPLG00000015475	CHD5	98	75.940	Anas_platyrhynchos
ENSSPUG00000010622	CHD5	98	77.402	ENSACAG00000002441	CHD5	96	77.365	Anolis_carolinensis
ENSSPUG00000010622	CHD5	90	78.462	ENSANAG00000001078	CHD5	91	80.378	Aotus_nancymaae
ENSSPUG00000010622	CHD5	89	87.179	ENSACLG00000003012	chd5	99	68.844	Astatotilapia_calliptera
ENSSPUG00000010622	CHD5	91	72.241	ENSAMXG00000008921	chd5	98	79.461	Astyanax_mexicanus
ENSSPUG00000010622	CHD5	94	80.729	ENSBTAG00000040477	CHD5	99	81.343	Bos_taurus
ENSSPUG00000010622	CHD5	98	80.747	ENSCJAG00000000101	CHD5	97	81.073	Callithrix_jacchus
ENSSPUG00000010622	CHD5	94	80.981	ENSCAFG00000019545	CHD5	99	81.216	Canis_familiaris
ENSSPUG00000010622	CHD5	99	80.982	ENSCAFG00020008689	CHD5	94	82.038	Canis_lupus_dingo
ENSSPUG00000010622	CHD5	98	80.618	ENSCHIG00000015027	CHD5	94	81.538	Capra_hircus
ENSSPUG00000010622	CHD5	97	79.390	ENSTSYG00000033991	CHD5	97	79.464	Carlito_syrichta
ENSSPUG00000010622	CHD5	98	81.088	ENSCAPG00000009294	CHD5	98	81.911	Cavia_aperea
ENSSPUG00000010622	CHD5	98	81.088	ENSCPOG00000025080	CHD5	98	81.911	Cavia_porcellus
ENSSPUG00000010622	CHD5	98	80.998	ENSCCAG00000024756	CHD5	97	81.030	Cebus_capucinus
ENSSPUG00000010622	CHD5	98	80.168	ENSCATG00000043011	CHD5	96	80.584	Cercocebus_atys
ENSSPUG00000010622	CHD5	98	80.777	ENSCLAG00000010589	CHD5	98	81.749	Chinchilla_lanigera
ENSSPUG00000010622	CHD5	98	81.063	ENSCSAG00000000733	CHD5	97	81.240	Chlorocebus_sabaeus
ENSSPUG00000010622	CHD5	94	83.025	ENSCPBG00000019363	CHD5	99	83.882	Chrysemys_picta_bellii
ENSSPUG00000010622	CHD5	98	81.010	ENSCANG00000032302	CHD5	97	81.538	Colobus_angolensis_palliatus
ENSSPUG00000010622	CHD5	56	84.920	ENSCGRG00001011042	Chd5	100	85.391	Cricetulus_griseus_chok1gshd
ENSSPUG00000010622	CHD5	97	81.371	ENSCGRG00000011341	Chd5	98	81.607	Cricetulus_griseus_crigri
ENSSPUG00000010622	CHD5	96	61.784	ENSDARG00000025789	chd4b	88	80.841	Danio_rerio
ENSSPUG00000010622	CHD5	98	70.757	ENSDARG00000105083	chd5	88	88.235	Danio_rerio
ENSSPUG00000010622	CHD5	91	84.915	ENSDNOG00000046342	CHD5	88	84.984	Dasypus_novemcinctus
ENSSPUG00000010622	CHD5	98	80.168	ENSDORG00000005923	Chd5	98	81.701	Dipodomys_ordii
ENSSPUG00000010622	CHD5	89	95.417	ENSEASG00005021464	CHD5	99	95.417	Equus_asinus_asinus
ENSSPUG00000010622	CHD5	89	94.650	ENSECAG00000025043	CHD5	98	93.651	Equus_caballus
ENSSPUG00000010622	CHD5	75	96.244	ENSEEUG00000002772	CHD5	75	96.244	Erinaceus_europaeus
ENSSPUG00000010622	CHD5	87	82.812	ENSELUG00000010742	chd5	89	92.056	Esox_lucius
ENSSPUG00000010622	CHD5	98	80.588	ENSFCAG00000006319	CHD5	97	80.955	Felis_catus
ENSSPUG00000010622	CHD5	98	81.571	ENSFALG00000009740	CHD5	97	82.235	Ficedula_albicollis
ENSSPUG00000010622	CHD5	98	81.095	ENSFDAG00000012881	CHD5	95	80.955	Fukomys_damarensis
ENSSPUG00000010622	CHD5	98	82.053	ENSGALG00000000747	CHD5	97	82.689	Gallus_gallus
ENSSPUG00000010622	CHD5	54	80.159	ENSGACG00000004389	chd5	99	75.043	Gasterosteus_aculeatus
ENSSPUG00000010622	CHD5	88	97.073	ENSGAGG00000001590	CHD5	99	97.095	Gopherus_agassizii
ENSSPUG00000010622	CHD5	98	81.365	ENSGGOG00000000708	CHD5	98	81.538	Gorilla_gorilla
ENSSPUG00000010622	CHD5	89	87.179	ENSHBUG00000013453	chd5	99	70.109	Haplochromis_burtoni
ENSSPUG00000010622	CHD5	99	79.564	ENSHGLG00000018184	CHD5	99	80.472	Heterocephalus_glaber_female
ENSSPUG00000010622	CHD5	98	74.295	ENSHGLG00100013261	CHD5	97	73.837	Heterocephalus_glaber_male
ENSSPUG00000010622	CHD5	94	74.109	ENSIPUG00000005446	chd5	90	84.706	Ictalurus_punctatus
ENSSPUG00000010622	CHD5	98	81.401	ENSSTOG00000002778	CHD5	98	82.334	Ictidomys_tridecemlineatus
ENSSPUG00000010622	CHD5	98	80.063	ENSJJAG00000019072	Chd5	97	80.274	Jaculus_jaculus
ENSSPUG00000010622	CHD5	97	75.428	ENSLOCG00000004944	chd5	95	75.040	Lepisosteus_oculatus
ENSSPUG00000010622	CHD5	98	81.684	ENSLAFG00000006348	CHD5	100	80.982	Loxodonta_africana
ENSSPUG00000010622	CHD5	98	81.010	ENSMFAG00000033993	CHD5	93	87.845	Macaca_fascicularis
ENSSPUG00000010622	CHD5	99	80.434	ENSMMUG00000016838	CHD5	98	81.363	Macaca_mulatta
ENSSPUG00000010622	CHD5	98	81.010	ENSMNEG00000040044	CHD5	97	81.188	Macaca_nemestrina
ENSSPUG00000010622	CHD5	98	78.721	ENSMLEG00000039166	CHD5	98	78.336	Mandrillus_leucophaeus
ENSSPUG00000010622	CHD5	88	87.179	ENSMZEG00005000841	chd5	93	72.678	Maylandia_zebra
ENSSPUG00000010622	CHD5	98	81.861	ENSMGAG00000001055	CHD5	97	82.480	Meleagris_gallopavo
ENSSPUG00000010622	CHD5	97	81.965	ENSMICG00000017862	CHD5	95	88.065	Microcebus_murinus
ENSSPUG00000010622	CHD5	99	79.937	ENSMOCG00000011049	Chd5	96	81.921	Microtus_ochrogaster
ENSSPUG00000010622	CHD5	80	95.088	ENSMODG00000006294	CHD5	73	87.027	Monodelphis_domestica
ENSSPUG00000010622	CHD5	94	73.466	ENSMALG00000002831	chd5	99	72.464	Monopterus_albus
ENSSPUG00000010622	CHD5	98	80.525	MGP_CAROLIEiJ_G0026857	Chd5	97	80.715	Mus_caroli
ENSSPUG00000010622	CHD5	97	81.475	ENSMUSG00000005045	Chd5	97	80.843	Mus_musculus
ENSSPUG00000010622	CHD5	97	81.504	MGP_PahariEiJ_G0029205	Chd5	97	81.029	Mus_pahari
ENSSPUG00000010622	CHD5	97	81.823	MGP_SPRETEiJ_G0027850	Chd5	97	81.240	Mus_spretus
ENSSPUG00000010622	CHD5	98	78.571	ENSMPUG00000007122	CHD5	89	92.982	Mustela_putorius_furo
ENSSPUG00000010622	CHD5	99	79.509	ENSNGAG00000019812	Chd5	96	79.613	Nannospalax_galili
ENSSPUG00000010622	CHD5	98	79.347	ENSNLEG00000010320	CHD5	98	79.448	Nomascus_leucogenys
ENSSPUG00000010622	CHD5	86	85.714	ENSOPRG00000004304	CHD5	85	86.036	Ochotona_princeps
ENSSPUG00000010622	CHD5	98	80.717	ENSODEG00000010262	CHD5	98	81.632	Octodon_degus
ENSSPUG00000010622	CHD5	91	78.295	ENSONIG00000000619	chd5	91	87.059	Oreochromis_niloticus
ENSSPUG00000010622	CHD5	97	65.777	ENSOANG00000001819	CHD5	97	72.727	Ornithorhynchus_anatinus
ENSSPUG00000010622	CHD5	98	79.294	ENSOGAG00000005703	CHD5	94	81.301	Otolemur_garnettii
ENSSPUG00000010622	CHD5	96	80.886	ENSOARG00000013425	CHD5	96	81.402	Ovis_aries
ENSSPUG00000010622	CHD5	98	81.073	ENSPPAG00000034048	CHD5	98	81.442	Pan_paniscus
ENSSPUG00000010622	CHD5	98	80.063	ENSPPRG00000009453	CHD5	97	80.430	Panthera_pardus
ENSSPUG00000010622	CHD5	98	74.379	ENSPTIG00000013926	CHD5	98	75.183	Panthera_tigris_altaica
ENSSPUG00000010622	CHD5	98	81.073	ENSPTRG00000000075	CHD5	97	81.197	Pan_troglodytes
ENSSPUG00000010622	CHD5	98	81.115	ENSPANG00000006765	CHD5	97	81.293	Papio_anubis
ENSSPUG00000010622	CHD5	94	74.219	ENSPKIG00000004282	chd5	92	92.958	Paramormyrops_kingsleyae
ENSSPUG00000010622	CHD5	97	75.928	ENSPSIG00000006414	CHD5	100	76.573	Pelodiscus_sinensis
ENSSPUG00000010622	CHD5	68	86.048	ENSPEMG00000014799	Chd5	97	87.231	Peromyscus_maniculatus_bairdii
ENSSPUG00000010622	CHD5	97	82.937	ENSPCIG00000028310	CHD5	96	81.037	Phascolarctos_cinereus
ENSSPUG00000010622	CHD5	89	87.179	ENSPLAG00000005343	chd5	95	77.105	Poecilia_latipinna
ENSSPUG00000010622	CHD5	92	92.632	ENSPPYG00000001952	CHD5	96	92.632	Pongo_abelii
ENSSPUG00000010622	CHD5	98	82.109	ENSPCOG00000022930	CHD5	97	82.162	Propithecus_coquereli
ENSSPUG00000010622	CHD5	89	87.179	ENSPNYG00000003183	chd5	92	87.698	Pundamilia_nyererei
ENSSPUG00000010622	CHD5	98	80.645	ENSRNOG00000011268	Chd5	97	80.854	Rattus_norvegicus
ENSSPUG00000010622	CHD5	98	80.808	ENSRBIG00000032140	CHD5	95	83.032	Rhinopithecus_bieti
ENSSPUG00000010622	CHD5	98	81.234	ENSRROG00000041146	CHD5	97	81.125	Rhinopithecus_roxellana
ENSSPUG00000010622	CHD5	98	80.362	ENSSBOG00000001955	CHD5	98	82.042	Saimiri_boliviensis_boliviensis
ENSSPUG00000010622	CHD5	98	79.138	ENSSHAG00000018641	CHD5	100	80.097	Sarcophilus_harrisii
ENSSPUG00000010622	CHD5	92	83.274	ENSSFOG00015006296	chd5	93	87.549	Scleropages_formosus
ENSSPUG00000010622	CHD5	94	73.507	ENSSDUG00000017526	chd5	99	72.532	Seriola_dumerili
ENSSPUG00000010622	CHD5	96	81.032	ENSSSCG00000003366	CHD5	99	81.673	Sus_scrofa
ENSSPUG00000010622	CHD5	94	76.129	ENSTGUG00000002634	-	100	78.403	Taeniopygia_guttata
ENSSPUG00000010622	CHD5	54	74.366	ENSTNIG00000004346	chd5	100	75.122	Tetraodon_nigroviridis
ENSSPUG00000010622	CHD5	98	80.594	ENSTTRG00000010468	CHD5	97	80.647	Tursiops_truncatus
ENSSPUG00000010622	CHD5	98	81.405	ENSUAMG00000024509	CHD5	97	85.124	Ursus_americanus
ENSSPUG00000010622	CHD5	98	76.366	ENSUMAG00000024173	CHD5	98	77.555	Ursus_maritimus
ENSSPUG00000010622	CHD5	89	94.715	ENSVVUG00000026480	CHD5	96	94.715	Vulpes_vulpes
ENSSPUG00000010622	CHD5	97	73.850	ENSXETG00000002904	chd5	100	73.266	Xenopus_tropicalis
ENSSPUG00000010622	CHD5	57	76.764	ENSXCOG00000014202	chd5	98	75.579	Xiphophorus_couchianus