EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000010779 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 32677 bases
Position: chrQEPC01003437.1:879563-912239
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000014022	XRN_N	PF03159.18	1.1e-48	1	1
ENSSPUP00000014028	XRN_N	PF03159.18	1.1e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000014965	-	1524	-	ENSSPUP00000014028	507 (aa)	-	-
ENSSPUT00000014959	-	1488	-	ENSSPUP00000014022	495 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000010779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000010779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000010779	-	99	34.452	ENSSPUG00000005485	XRN2	59	34.629

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000010779	-	95	86.583	ENSG00000114127	XRN1	100	93.939	Homo_sapiens
ENSSPUG00000010779	-	95	75.745	ENSAPOG00000000622	xrn1	99	72.655	Acanthochromis_polyacanthus
ENSSPUG00000010779	-	95	75.789	ENSAOCG00000014097	xrn1	89	72.786	Amphiprion_ocellaris
ENSSPUG00000010779	-	95	72.669	ENSAMXG00000019370	xrn1	97	70.208	Astyanax_mexicanus
ENSSPUG00000010779	-	98	54.767	ENSCING00000001334	-	97	55.061	Ciona_intestinalis
ENSSPUG00000010779	-	95	77.707	ENSCSEG00000021285	xrn1	95	78.186	Cynoglossus_semilaevis
ENSSPUG00000010779	-	96	79.253	ENSDARG00000091652	xrn1	99	79.253	Danio_rerio
ENSSPUG00000010779	-	95	72.803	ENSFCAG00000027589	XRN1	77	84.831	Felis_catus
ENSSPUG00000010779	-	96	71.548	ENSFHEG00000017356	-	98	70.650	Fundulus_heteroclitus
ENSSPUG00000010779	-	97	73.196	ENSHBUG00000005908	xrn1	98	73.196	Haplochromis_burtoni
ENSSPUG00000010779	-	95	85.504	ENSJJAG00000010863	Xrn1	50	85.714	Jaculus_jaculus
ENSSPUG00000010779	-	95	77.919	ENSKMAG00000021356	xrn1	96	77.215	Kryptolebias_marmoratus
ENSSPUG00000010779	-	95	77.542	ENSLBEG00000018656	xrn1	95	76.141	Labrus_bergylta
ENSSPUG00000010779	-	95	86.555	ENSLAFG00000015426	XRN1	81	68.450	Loxodonta_africana
ENSSPUG00000010779	-	71	85.070	ENSMLEG00000041349	-	77	85.070	Mandrillus_leucophaeus
ENSSPUG00000010779	-	97	75.934	ENSMAMG00000013219	xrn1	95	75.514	Mastacembelus_armatus
ENSSPUG00000010779	-	91	75.055	ENSMMOG00000020896	-	80	73.523	Mola_mola
ENSSPUG00000010779	-	70	84.746	ENSRROG00000033764	-	76	85.429	Rhinopithecus_roxellana
ENSSPUG00000010779	-	99	75.351	ENSSPAG00000009856	-	95	76.639	Stegastes_partitus
ENSSPUG00000010779	-	95	76.371	ENSTRUG00000004895	xrn1	97	76.709	Takifugu_rubripes
ENSSPUG00000010779	-	95	88.161	ENSVVUG00000024461	XRN1	99	87.764	Vulpes_vulpes
ENSSPUG00000010779	-	96	81.628	ENSXETG00000000619	xrn1	74	85.263	Xenopus_tropicalis