EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000010801 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 109098 bases
Position: chrQEPC01010148.1:1010554-1119651
Accession: 29190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000014071	Ago_hook	PF10427.9	3.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000015010	TNRC6B-201	5004	-	ENSSPUP00000014071	1667 (aa)	-	-
ENSSPUT00000015018	TNRC6B-202	4674	-	ENSSPUP00000014079	1557 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000010801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000010801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000010801	TNRC6B	80	39.426	ENSSPUG00000007341	TNRC6C	89	39.488
ENSSPUG00000010801	TNRC6B	96	43.348	ENSSPUG00000010525	TNRC6A	98	37.396

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000010801	TNRC6B	100	88.599	ENSG00000100354	TNRC6B	92	88.717	Homo_sapiens
ENSSPUG00000010801	TNRC6B	100	88.005	ENSAMEG00000011025	TNRC6B	91	88.361	Ailuropoda_melanoleuca
ENSSPUG00000010801	TNRC6B	100	82.736	ENSAPLG00000009347	TNRC6B	92	83.035	Anas_platyrhynchos
ENSSPUG00000010801	TNRC6B	91	77.625	ENSACAG00000007281	TNRC6B	86	76.018	Anolis_carolinensis
ENSSPUG00000010801	TNRC6B	100	88.183	ENSANAG00000035042	TNRC6B	92	88.539	Aotus_nancymaae
ENSSPUG00000010801	TNRC6B	71	45.863	ENSAMXG00000008707	tnrc6b	60	42.449	Astyanax_mexicanus
ENSSPUG00000010801	TNRC6B	100	86.730	ENSBTAG00000021076	TNRC6B	92	87.085	Bos_taurus
ENSSPUG00000010801	TNRC6B	94	96.338	ENSCJAG00000002732	TNRC6B	96	96.338	Callithrix_jacchus
ENSSPUG00000010801	TNRC6B	100	87.500	ENSCAFG00000001255	TNRC6B	92	87.974	Canis_familiaris
ENSSPUG00000010801	TNRC6B	100	81.257	ENSCAFG00020002189	TNRC6B	93	81.495	Canis_lupus_dingo
ENSSPUG00000010801	TNRC6B	100	87.990	ENSTSYG00000011836	TNRC6B	92	88.109	Carlito_syrichta
ENSSPUG00000010801	TNRC6B	99	89.815	ENSCPOG00000005705	TNRC6B	91	82.405	Cavia_porcellus
ENSSPUG00000010801	TNRC6B	100	86.809	ENSCCAG00000019912	TNRC6B	92	87.166	Cebus_capucinus
ENSSPUG00000010801	TNRC6B	100	87.760	ENSCATG00000029291	TNRC6B	92	87.879	Cercocebus_atys
ENSSPUG00000010801	TNRC6B	92	89.470	ENSCPBG00000022932	TNRC6B	92	89.786	Chrysemys_picta_bellii
ENSSPUG00000010801	TNRC6B	100	88.235	ENSCANG00000030776	TNRC6B	92	88.354	Colobus_angolensis_palliatus
ENSSPUG00000010801	TNRC6B	96	79.902	ENSCGRG00001020166	Tnrc6b	89	81.594	Cricetulus_griseus_chok1gshd
ENSSPUG00000010801	TNRC6B	100	81.587	ENSCGRG00000016696	Tnrc6b	91	82.028	Cricetulus_griseus_crigri
ENSSPUG00000010801	TNRC6B	100	86.393	ENSDNOG00000012744	TNRC6B	91	86.988	Dasypus_novemcinctus
ENSSPUG00000010801	TNRC6B	98	86.427	ENSDORG00000003386	Tnrc6b	89	86.427	Dipodomys_ordii
ENSSPUG00000010801	TNRC6B	100	71.149	ENSETEG00000006570	TNRC6B	91	72.361	Echinops_telfairi
ENSSPUG00000010801	TNRC6B	100	81.743	ENSEASG00005005306	TNRC6B	92	80.676	Equus_asinus_asinus
ENSSPUG00000010801	TNRC6B	96	96.000	ENSECAG00000009759	TNRC6B	92	96.000	Equus_caballus
ENSSPUG00000010801	TNRC6B	53	93.040	ENSEEUG00000008690	-	52	93.040	Erinaceus_europaeus
ENSSPUG00000010801	TNRC6B	100	87.640	ENSFCAG00000004791	TNRC6B	92	87.995	Felis_catus
ENSSPUG00000010801	TNRC6B	100	86.567	ENSFALG00000012195	TNRC6B	96	87.104	Ficedula_albicollis
ENSSPUG00000010801	TNRC6B	99	90.233	ENSFDAG00000021368	TNRC6B	90	83.165	Fukomys_damarensis
ENSSPUG00000010801	TNRC6B	95	92.617	ENSGALG00000012050	TNRC6B	89	86.977	Gallus_gallus
ENSSPUG00000010801	TNRC6B	100	91.413	ENSGAGG00000025188	TNRC6B	91	91.711	Gopherus_agassizii
ENSSPUG00000010801	TNRC6B	100	88.539	ENSGGOG00000008444	TNRC6B	92	88.658	Gorilla_gorilla
ENSSPUG00000010801	TNRC6B	100	87.226	ENSHGLG00000009306	TNRC6B	94	87.286	Heterocephalus_glaber_female
ENSSPUG00000010801	TNRC6B	100	81.786	ENSHGLG00100018108	TNRC6B	91	83.304	Heterocephalus_glaber_male
ENSSPUG00000010801	TNRC6B	79	43.897	ENSIPUG00000001515	tnrc6b	73	45.401	Ictalurus_punctatus
ENSSPUG00000010801	TNRC6B	100	81.501	ENSSTOG00000008927	TNRC6B	90	83.432	Ictidomys_tridecemlineatus
ENSSPUG00000010801	TNRC6B	100	59.826	ENSLACG00000000628	-	91	60.807	Latimeria_chalumnae
ENSSPUG00000010801	TNRC6B	85	87.805	ENSLAFG00000014473	TNRC6B	100	88.432	Loxodonta_africana
ENSSPUG00000010801	TNRC6B	100	87.819	ENSMFAG00000003862	TNRC6B	92	87.938	Macaca_fascicularis
ENSSPUG00000010801	TNRC6B	100	82.591	ENSMMUG00000021345	TNRC6B	91	80.927	Macaca_mulatta
ENSSPUG00000010801	TNRC6B	100	82.531	ENSMNEG00000042745	TNRC6B	92	80.867	Macaca_nemestrina
ENSSPUG00000010801	TNRC6B	100	88.354	ENSMLEG00000041780	TNRC6B	92	88.473	Mandrillus_leucophaeus
ENSSPUG00000010801	TNRC6B	100	91.224	ENSMGAG00000012333	TNRC6B	92	91.403	Meleagris_gallopavo
ENSSPUG00000010801	TNRC6B	99	90.528	ENSMICG00000014056	TNRC6B	92	87.967	Microcebus_murinus
ENSSPUG00000010801	TNRC6B	100	81.543	ENSMUSG00000047888	Tnrc6b	99	75.419	Mus_musculus
ENSSPUG00000010801	TNRC6B	100	86.766	MGP_SPRETEiJ_G0020941	Tnrc6b	90	86.706	Mus_spretus
ENSSPUG00000010801	TNRC6B	98	91.985	ENSMPUG00000016442	TNRC6B	93	81.411	Mustela_putorius_furo
ENSSPUG00000010801	TNRC6B	100	87.612	ENSMLUG00000008765	TNRC6B	92	88.088	Myotis_lucifugus
ENSSPUG00000010801	TNRC6B	100	82.162	ENSNGAG00000021294	Tnrc6b	90	82.840	Nannospalax_galili
ENSSPUG00000010801	TNRC6B	89	88.765	ENSNLEG00000015311	TNRC6B	87	88.765	Nomascus_leucogenys
ENSSPUG00000010801	TNRC6B	90	81.609	ENSOPRG00000012054	TNRC6B	80	81.609	Ochotona_princeps
ENSSPUG00000010801	TNRC6B	100	87.915	ENSOGAG00000011096	TNRC6B	92	88.033	Otolemur_garnettii
ENSSPUG00000010801	TNRC6B	100	88.420	ENSPPAG00000028514	TNRC6B	92	88.539	Pan_paniscus
ENSSPUG00000010801	TNRC6B	100	88.005	ENSPPRG00000017741	TNRC6B	92	88.361	Panthera_pardus
ENSSPUG00000010801	TNRC6B	100	85.170	ENSPTIG00000022064	TNRC6B	92	85.706	Panthera_tigris_altaica
ENSSPUG00000010801	TNRC6B	100	88.414	ENSPTRG00000047826	TNRC6B	92	88.532	Pan_troglodytes
ENSSPUG00000010801	TNRC6B	100	81.250	ENSPANG00000009271	TNRC6B	93	81.429	Papio_anubis
ENSSPUG00000010801	TNRC6B	100	86.643	ENSPSIG00000005318	TNRC6B	91	87.478	Pelodiscus_sinensis
ENSSPUG00000010801	TNRC6B	100	84.192	ENSPCIG00000020347	TNRC6B	92	84.962	Phascolarctos_cinereus
ENSSPUG00000010801	TNRC6B	72	54.054	ENSPMEG00000006371	-	64	54.502	Poecilia_mexicana
ENSSPUG00000010801	TNRC6B	100	83.373	ENSPPYG00000011849	TNRC6B	96	85.629	Pongo_abelii
ENSSPUG00000010801	TNRC6B	72	81.941	ENSPCAG00000008739	TNRC6B	66	81.941	Procavia_capensis
ENSSPUG00000010801	TNRC6B	99	90.683	ENSPCOG00000020790	TNRC6B	92	88.026	Propithecus_coquereli
ENSSPUG00000010801	TNRC6B	92	86.054	ENSPVAG00000004975	TNRC6B	83	86.054	Pteropus_vampyrus
ENSSPUG00000010801	TNRC6B	62	50.263	ENSPNAG00000011713	tnrc6b	77	46.514	Pygocentrus_nattereri
ENSSPUG00000010801	TNRC6B	100	88.176	ENSRBIG00000035576	TNRC6B	92	88.295	Rhinopithecus_bieti
ENSSPUG00000010801	TNRC6B	100	88.116	ENSRROG00000031135	TNRC6B	92	88.235	Rhinopithecus_roxellana
ENSSPUG00000010801	TNRC6B	100	88.190	ENSSBOG00000029743	TNRC6B	92	88.546	Saimiri_boliviensis_boliviensis
ENSSPUG00000010801	TNRC6B	100	84.133	ENSSHAG00000009692	TNRC6B	92	84.725	Sarcophilus_harrisii
ENSSPUG00000010801	TNRC6B	63	81.818	ENSSARG00000007971	-	62	81.818	Sorex_araneus
ENSSPUG00000010801	TNRC6B	100	87.827	ENSSSCG00000000078	TNRC6B	90	88.183	Sus_scrofa
ENSSPUG00000010801	TNRC6B	93	82.425	ENSTGUG00000010138	-	90	80.115	Taeniopygia_guttata
ENSSPUG00000010801	TNRC6B	94	92.785	ENSTTRG00000011465	TNRC6B	87	92.785	Tursiops_truncatus
ENSSPUG00000010801	TNRC6B	100	81.721	ENSUAMG00000007174	TNRC6B	90	82.493	Ursus_americanus
ENSSPUG00000010801	TNRC6B	100	81.721	ENSUMAG00000014336	TNRC6B	92	82.374	Ursus_maritimus
ENSSPUG00000010801	TNRC6B	67	80.795	ENSVPAG00000001467	TNRC6B	64	80.795	Vicugna_pacos
ENSSPUG00000010801	TNRC6B	100	87.656	ENSVVUG00000007064	TNRC6B	90	88.131	Vulpes_vulpes