EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000010896 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 3308 bases
Position: chrQEPC01000157.1:1148801-1152108
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000014139	MMR_HSR1	PF01926.23	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000015081	-	615	-	ENSSPUP00000014139	204 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000010896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000010896's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000010896	-	83	38.824	ENSSPUG00000001173	RAB5A	88	38.824
ENSSPUG00000010896	-	95	37.561	ENSSPUG00000010337	RAB42	85	38.674
ENSSPUG00000010896	-	95	36.410	ENSSPUG00000012950	-	79	38.824
ENSSPUG00000010896	-	75	39.610	ENSSPUG00000000017	RAB22A	79	39.610
ENSSPUG00000010896	-	100	53.171	ENSSPUG00000012822	RAB1A	83	58.960
ENSSPUG00000010896	-	83	43.023	ENSSPUG00000003222	RAB12	70	43.023
ENSSPUG00000010896	-	81	59.639	ENSSPUG00000007945	RAB1B	84	58.929
ENSSPUG00000010896	-	96	34.826	ENSSPUG00000013564	-	89	35.754
ENSSPUG00000010896	-	80	47.879	ENSSPUG00000017677	-	80	47.879
ENSSPUG00000010896	-	87	34.078	ENSSPUG00000008958	NRAS	92	34.078
ENSSPUG00000010896	-	81	34.132	ENSSPUG00000018789	-	88	33.929
ENSSPUG00000010896	-	76	39.506	ENSSPUG00000015007	RAB29	79	39.506
ENSSPUG00000010896	-	80	31.928	ENSSPUG00000007384	RAP2B	92	31.953
ENSSPUG00000010896	-	82	37.572	ENSSPUG00000017531	RAB9B	86	37.572
ENSSPUG00000010896	-	96	36.816	ENSSPUG00000003459	-	85	39.181
ENSSPUG00000010896	-	71	37.333	ENSSPUG00000018361	RHEB	85	37.333
ENSSPUG00000010896	-	51	30.476	ENSSPUG00000007555	ARL5C	60	30.392
ENSSPUG00000010896	-	94	41.791	ENSSPUG00000013698	RAB11A	79	45.963
ENSSPUG00000010896	-	85	34.091	ENSSPUG00000005243	HRAS	90	34.091
ENSSPUG00000010896	-	78	32.317	ENSSPUG00000017750	MRAS	78	32.317
ENSSPUG00000010896	-	75	36.129	ENSSPUG00000006274	RAB23	73	35.260
ENSSPUG00000010896	-	73	31.333	ENSSPUG00000016774	RRAS2	88	32.099
ENSSPUG00000010896	-	60	36.000	ENSSPUG00000015409	RAB17	57	36.000
ENSSPUG00000010896	-	99	74.257	ENSSPUG00000016258	RAB35	91	78.571
ENSSPUG00000010896	-	79	43.195	ENSSPUG00000002555	RAB25	79	43.312
ENSSPUG00000010896	-	78	38.509	ENSSPUG00000001533	-	76	38.509
ENSSPUG00000010896	-	95	43.284	ENSSPUG00000005574	RAB33A	82	44.974
ENSSPUG00000010896	-	59	32.558	ENSSPUG00000017490	RABL3	51	32.500
ENSSPUG00000010896	-	91	42.246	ENSSPUG00000010112	RAB2B	86	42.246
ENSSPUG00000010896	-	85	47.126	ENSSPUG00000006349	RAB30	86	47.126
ENSSPUG00000010896	-	95	34.872	ENSSPUG00000003439	RAB31	83	38.509
ENSSPUG00000010896	-	87	41.989	ENSSPUG00000000552	RAB39B	85	41.989
ENSSPUG00000010896	-	55	32.759	ENSSPUG00000002363	-	58	32.759
ENSSPUG00000010896	-	81	32.934	ENSSPUG00000003341	-	89	32.738
ENSSPUG00000010896	-	98	42.105	ENSSPUG00000002243	-	77	46.429
ENSSPUG00000010896	-	88	45.000	ENSSPUG00000000617	RAB15	85	45.000
ENSSPUG00000010896	-	86	36.413	ENSSPUG00000017301	RAB6A	88	36.413
ENSSPUG00000010896	-	80	37.870	ENSSPUG00000004262	RAB7A	82	37.870
ENSSPUG00000010896	-	97	38.756	ENSSPUG00000002526	-	77	44.048
ENSSPUG00000010896	-	99	37.143	ENSSPUG00000018803	RAB14	82	39.572
ENSSPUG00000010896	-	89	41.711	ENSSPUG00000008120	RAB33B	79	41.711
ENSSPUG00000010896	-	89	36.559	ENSSPUG00000014551	RAB36	80	36.757
ENSSPUG00000010896	-	55	30.435	ENSSPUG00000008413	ARL4A	58	30.435
ENSSPUG00000010896	-	82	36.310	ENSSPUG00000014873	RAB5B	78	36.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000010896	-	99	66.990	WBGene00004284	rab-35	91	70.681	Caenorhabditis_elegans
ENSSPUG00000010896	-	99	68.473	ENSCING00000016136	-	90	71.429	Ciona_intestinalis
ENSSPUG00000010896	-	77	77.215	ENSCSAVG00000008995	-	99	77.215	Ciona_savignyi
ENSSPUG00000010896	-	97	65.657	FBgn0031090	Rab35	88	71.186	Drosophila_melanogaster
ENSSPUG00000010896	-	98	80.500	ENSXETG00000011370	rab35	99	80.500	Xenopus_tropicalis