EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000010941 (Gene tree)
Gene ID: -
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 39640 bases
Position: chrQEPC01011097.1:242525-282164
Accession: 19950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000014183	RRM_1	PF00076.22	3.6e-06	1	1
ENSSPUP00000014188	RRM_1	PF00076.22	4.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000015126	RDM1-201	825	-	ENSSPUP00000014183	267 (aa)	-	-
ENSSPUT00000015133	RDM1-202	970	-	ENSSPUP00000014188	266 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000010941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000010941's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000010941	RDM1	94	53.585	ENSG00000278023	RDM1	88	69.000	Homo_sapiens
ENSSPUG00000010941	RDM1	82	38.667	ENSAPOG00000021886	zgc:103564	84	38.667	Acanthochromis_polyacanthus
ENSSPUG00000010941	RDM1	94	38.846	ENSAPEG00000008929	zgc:103564	95	38.846	Amphiprion_percula
ENSSPUG00000010941	RDM1	85	67.241	ENSAPLG00000004384	RDM1	89	67.241	Anas_platyrhynchos
ENSSPUG00000010941	RDM1	95	66.148	ENSACAG00000012989	-	94	66.148	Anolis_carolinensis
ENSSPUG00000010941	RDM1	94	52.852	ENSANAG00000032752	RDM1	93	62.791	Aotus_nancymaae
ENSSPUG00000010941	RDM1	96	50.000	ENSBTAG00000000030	RDM1	92	50.000	Bos_taurus
ENSSPUG00000010941	RDM1	90	52.000	ENSCJAG00000015031	RDM1	93	62.791	Callithrix_jacchus
ENSSPUG00000010941	RDM1	90	47.843	ENSCAFG00000015160	-	99	47.843	Canis_familiaris
ENSSPUG00000010941	RDM1	96	50.000	ENSCHIG00000020607	RDM1	93	50.000	Capra_hircus
ENSSPUG00000010941	RDM1	93	50.958	ENSCPOG00000001495	-	90	50.958	Cavia_porcellus
ENSSPUG00000010941	RDM1	94	51.331	ENSCCAG00000035763	RDM1	93	60.465	Cebus_capucinus
ENSSPUG00000010941	RDM1	94	54.340	ENSCATG00000044451	RDM1	93	62.791	Cercocebus_atys
ENSSPUG00000010941	RDM1	89	53.252	ENSCSAG00000006209	RDM1	92	53.252	Chlorocebus_sabaeus
ENSSPUG00000010941	RDM1	88	72.269	ENSCPBG00000009105	RDM1	88	75.546	Chrysemys_picta_bellii
ENSSPUG00000010941	RDM1	94	53.962	ENSCANG00000041322	RDM1	93	62.727	Colobus_angolensis_palliatus
ENSSPUG00000010941	RDM1	94	52.107	ENSCGRG00001015927	Rdm1	91	52.107	Cricetulus_griseus_chok1gshd
ENSSPUG00000010941	RDM1	91	36.759	ENSCVAG00000001956	zgc:103564	93	37.308	Cyprinodon_variegatus
ENSSPUG00000010941	RDM1	87	51.681	ENSDNOG00000045224	-	86	53.448	Dasypus_novemcinctus
ENSSPUG00000010941	RDM1	79	50.455	ENSEASG00005010554	RDM1	77	50.455	Equus_asinus_asinus
ENSSPUG00000010941	RDM1	95	48.659	ENSECAG00000022182	RDM1	90	52.362	Equus_caballus
ENSSPUG00000010941	RDM1	85	50.427	ENSEEUG00000006127	RDM1	91	50.427	Erinaceus_europaeus
ENSSPUG00000010941	RDM1	80	53.333	ENSFCAG00000043429	RDM1	93	62.791	Felis_catus
ENSSPUG00000010941	RDM1	94	66.797	ENSGALG00000000243	RDM1	91	66.797	Gallus_gallus
ENSSPUG00000010941	RDM1	82	74.439	ENSGAGG00000000293	-	81	68.217	Gopherus_agassizii
ENSSPUG00000010941	RDM1	94	53.962	ENSGGOG00000010584	RDM1	93	62.791	Gorilla_gorilla
ENSSPUG00000010941	RDM1	91	36.111	ENSHCOG00000002518	-	89	36.400	Hippocampus_comes
ENSSPUG00000010941	RDM1	96	48.689	ENSSTOG00000022491	RDM1	92	49.425	Ictidomys_tridecemlineatus
ENSSPUG00000010941	RDM1	90	50.794	ENSLAFG00000029300	RDM1	89	50.787	Loxodonta_africana
ENSSPUG00000010941	RDM1	94	54.340	ENSMFAG00000032968	RDM1	93	62.791	Macaca_fascicularis
ENSSPUG00000010941	RDM1	94	54.340	ENSMMUG00000006847	RDM1	93	63.636	Macaca_mulatta
ENSSPUG00000010941	RDM1	94	54.340	ENSMNEG00000039977	RDM1	93	62.791	Macaca_nemestrina
ENSSPUG00000010941	RDM1	94	53.962	ENSMLEG00000041158	RDM1	93	63.636	Mandrillus_leucophaeus
ENSSPUG00000010941	RDM1	85	65.502	ENSMGAG00000008774	RDM1	91	65.502	Meleagris_gallopavo
ENSSPUG00000010941	RDM1	94	52.490	ENSMAUG00000018559	Rdm1	91	52.490	Mesocricetus_auratus
ENSSPUG00000010941	RDM1	96	51.311	ENSMICG00000038651	RDM1	93	55.000	Microcebus_murinus
ENSSPUG00000010941	RDM1	91	49.012	ENSMOCG00000015095	Rdm1	92	49.012	Microtus_ochrogaster
ENSSPUG00000010941	RDM1	91	52.964	ENSMODG00000011101	RDM1	91	52.964	Monodelphis_domestica
ENSSPUG00000010941	RDM1	89	50.598	MGP_CAROLIEiJ_G0017226	Rdm1	91	50.570	Mus_caroli
ENSSPUG00000010941	RDM1	89	50.598	ENSMUSG00000010362	Rdm1	91	50.570	Mus_musculus
ENSSPUG00000010941	RDM1	94	49.810	MGP_PahariEiJ_G0018356	Rdm1	91	49.810	Mus_pahari
ENSSPUG00000010941	RDM1	89	49.801	MGP_SPRETEiJ_G0018069	Rdm1	91	49.810	Mus_spretus
ENSSPUG00000010941	RDM1	96	50.558	ENSMPUG00000008363	RDM1	92	50.558	Mustela_putorius_furo
ENSSPUG00000010941	RDM1	94	52.672	ENSNLEG00000014173	RDM1	86	68.000	Nomascus_leucogenys
ENSSPUG00000010941	RDM1	90	51.210	ENSMEUG00000015826	RDM1	99	51.210	Notamacropus_eugenii
ENSSPUG00000010941	RDM1	90	50.794	ENSOCUG00000022704	RDM1	97	50.794	Oryctolagus_cuniculus
ENSSPUG00000010941	RDM1	91	53.571	ENSOGAG00000011332	RDM1	88	53.600	Otolemur_garnettii
ENSSPUG00000010941	RDM1	94	54.717	ENSPPAG00000029969	RDM1	92	54.717	Pan_paniscus
ENSSPUG00000010941	RDM1	94	54.340	ENSPTRG00000009031	RDM1	93	63.566	Pan_troglodytes
ENSSPUG00000010941	RDM1	94	53.962	ENSPANG00000022933	RDM1	93	62.016	Papio_anubis
ENSSPUG00000010941	RDM1	94	50.575	ENSPEMG00000018985	Rdm1	92	50.575	Peromyscus_maniculatus_bairdii
ENSSPUG00000010941	RDM1	94	52.830	ENSPPYG00000008198	RDM1	92	52.830	Pongo_abelii
ENSSPUG00000010941	RDM1	91	51.190	ENSPCOG00000017995	RDM1	93	61.240	Propithecus_coquereli
ENSSPUG00000010941	RDM1	90	52.000	ENSPVAG00000001116	RDM1	99	52.000	Pteropus_vampyrus
ENSSPUG00000010941	RDM1	94	50.958	ENSRNOG00000020751	Rdm1	91	50.958	Rattus_norvegicus
ENSSPUG00000010941	RDM1	94	54.340	ENSRBIG00000030000	RDM1	93	62.791	Rhinopithecus_bieti
ENSSPUG00000010941	RDM1	94	54.717	ENSRROG00000035242	RDM1	93	63.636	Rhinopithecus_roxellana
ENSSPUG00000010941	RDM1	94	54.231	ENSSHAG00000013584	RDM1	94	54.231	Sarcophilus_harrisii
ENSSPUG00000010941	RDM1	91	38.340	ENSSPAG00000011690	-	91	38.340	Stegastes_partitus
ENSSPUG00000010941	RDM1	85	42.241	ENSSSCG00000017574	-	93	46.396	Sus_scrofa
ENSSPUG00000010941	RDM1	85	42.672	ENSTBEG00000010030	RDM1	92	42.672	Tupaia_belangeri
ENSSPUG00000010941	RDM1	96	50.936	ENSUAMG00000027279	RDM1	92	50.936	Ursus_americanus
ENSSPUG00000010941	RDM1	96	50.936	ENSUMAG00000015423	RDM1	90	50.936	Ursus_maritimus