EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000011420 (Gene tree)
Gene ID: -
Gene Symbol: E4F1
Alias: E4F
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 16107 bases
Position: chrQEPC01001667.1:3721341-3737447
Accession: 3121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000014796	zf-C2H2	PF00096.26	4.3e-37	1	6
ENSSPUP00000014796	zf-C2H2	PF00096.26	4.3e-37	2	6
ENSSPUP00000014796	zf-C2H2	PF00096.26	4.3e-37	3	6
ENSSPUP00000014796	zf-C2H2	PF00096.26	4.3e-37	4	6
ENSSPUP00000014796	zf-C2H2	PF00096.26	4.3e-37	5	6
ENSSPUP00000014796	zf-C2H2	PF00096.26	4.3e-37	6	6
ENSSPUP00000014796	zf-met	PF12874.7	4.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000015786	E4F1-201	2701	-	ENSSPUP00000014796	781 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000011420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000011420's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000011420	E4F1	66	41.176	ENSSPUG00000009764	-	76	42.222
ENSSPUG00000011420	E4F1	54	37.121	ENSSPUG00000007147	-	95	39.744
ENSSPUG00000011420	E4F1	51	39.394	ENSSPUG00000009941	PRDM5	83	44.737
ENSSPUG00000011420	E4F1	80	56.000	ENSSPUG00000000709	ZNF236	77	56.000
ENSSPUG00000011420	E4F1	69	40.645	ENSSPUG00000010016	-	95	48.052
ENSSPUG00000011420	E4F1	53	38.000	ENSSPUG00000008417	ZNF770	65	38.000
ENSSPUG00000011420	E4F1	58	41.758	ENSSPUG00000018867	-	91	41.758
ENSSPUG00000011420	E4F1	52	44.872	ENSSPUG00000011853	ZBTB48	52	44.444
ENSSPUG00000011420	E4F1	57	42.708	ENSSPUG00000007064	-	99	42.708
ENSSPUG00000011420	E4F1	58	44.578	ENSSPUG00000010059	-	78	45.455
ENSSPUG00000011420	E4F1	70	41.818	ENSSPUG00000000136	-	96	43.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000011420	E4F1	95	46.727	ENSCVAG00000002788	e4f1	98	47.607	Cyprinodon_variegatus
ENSSPUG00000011420	E4F1	66	38.676	ENSEBUG00000016435	e4f1	79	37.815	Eptatretus_burgeri
ENSSPUG00000011420	E4F1	95	46.397	ENSFHEG00000022551	e4f1	94	46.887	Fundulus_heteroclitus
ENSSPUG00000011420	E4F1	83	51.339	ENSGMOG00000011409	e4f1	97	51.496	Gadus_morhua
ENSSPUG00000011420	E4F1	97	48.450	ENSGACG00000011808	e4f1	97	49.146	Gasterosteus_aculeatus
ENSSPUG00000011420	E4F1	95	45.408	ENSHCOG00000016455	e4f1	98	44.201	Hippocampus_comes
ENSSPUG00000011420	E4F1	95	46.042	ENSIPUG00000005379	e4f1	97	45.370	Ictalurus_punctatus
ENSSPUG00000011420	E4F1	95	46.556	ENSLBEG00000026373	e4f1	97	48.711	Labrus_bergylta
ENSSPUG00000011420	E4F1	97	45.866	ENSMMOG00000007612	e4f1	97	46.490	Mola_mola
ENSSPUG00000011420	E4F1	95	48.240	ENSMALG00000007314	e4f1	97	48.172	Monopterus_albus
ENSSPUG00000011420	E4F1	94	48.090	ENSORLG00000009160	e4f1	96	48.303	Oryzias_latipes
ENSSPUG00000011420	E4F1	94	46.556	ENSORLG00020017974	e4f1	96	46.650	Oryzias_latipes_hni
ENSSPUG00000011420	E4F1	94	48.079	ENSORLG00015007385	e4f1	96	48.353	Oryzias_latipes_hsok
ENSSPUG00000011420	E4F1	94	47.854	ENSOMEG00000012220	e4f1	96	47.650	Oryzias_melastigma
ENSSPUG00000011420	E4F1	97	50.841	ENSPKIG00000001942	e4f1	97	51.720	Paramormyrops_kingsleyae
ENSSPUG00000011420	E4F1	79	69.000	ENSPMGG00000020527	e4f1	92	56.098	Periophthalmus_magnuspinnatus
ENSSPUG00000011420	E4F1	98	49.546	ENSSFOG00015021291	e4f1	97	49.732	Scleropages_formosus
ENSSPUG00000011420	E4F1	95	47.545	ENSSMAG00000014720	e4f1	97	47.964	Scophthalmus_maximus
ENSSPUG00000011420	E4F1	95	45.625	ENSTRUG00000005176	e4f1	97	45.833	Takifugu_rubripes
ENSSPUG00000011420	E4F1	94	48.800	ENSTNIG00000018001	e4f1	100	48.340	Tetraodon_nigroviridis
ENSSPUG00000011420	E4F1	78	71.429	ENSXETG00000016091	e4f1	100	71.429	Xenopus_tropicalis