EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000011837 (Gene tree)
Gene ID: -
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 108114 bases
Position: chrQEPC01014677.1:212823-320936
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000015375	La	PF05383.17	6.2e-22	1	1
ENSSPUP00000015334	La	PF05383.17	1.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000016401	LARP1B-202	2490	-	ENSSPUP00000015375	829 (aa)	-	-
ENSSPUT00000016360	LARP1B-201	2176	-	ENSSPUP00000015334	700 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000011837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000011837's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000011837	LARP1B	98	57.078	ENSSPUG00000012179	-	79	57.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000011837	LARP1B	97	67.503	ENSG00000138709	LARP1B	100	76.000	Homo_sapiens
ENSSPUG00000011837	LARP1B	86	70.614	ENSAPOG00000020101	larp1b	81	58.469	Acanthochromis_polyacanthus
ENSSPUG00000011837	LARP1B	74	75.432	ENSAMEG00000002748	LARP1B	98	73.716	Ailuropoda_melanoleuca
ENSSPUG00000011837	LARP1B	77	64.222	ENSACIG00000023890	larp1b	76	60.358	Amphilophus_citrinellus
ENSSPUG00000011837	LARP1B	71	62.621	ENSAOCG00000014268	larp1b	76	61.192	Amphiprion_ocellaris
ENSSPUG00000011837	LARP1B	87	69.462	ENSAPEG00000004126	larp1b	80	58.783	Amphiprion_percula
ENSSPUG00000011837	LARP1B	96	56.134	ENSATEG00000017849	larp1b	82	56.920	Anabas_testudineus
ENSSPUG00000011837	LARP1B	94	67.207	ENSAPLG00000010129	LARP1B	95	66.976	Anas_platyrhynchos
ENSSPUG00000011837	LARP1B	88	75.219	ENSACAG00000011338	LARP1B	83	74.816	Anolis_carolinensis
ENSSPUG00000011837	LARP1B	93	57.297	ENSANAG00000034618	LARP1B	95	64.939	Aotus_nancymaae
ENSSPUG00000011837	LARP1B	94	56.690	ENSACLG00000011948	larp1b	81	56.138	Astatotilapia_calliptera
ENSSPUG00000011837	LARP1B	84	55.937	ENSAMXG00000006805	larp1b	75	56.020	Astyanax_mexicanus
ENSSPUG00000011837	LARP1B	99	69.283	ENSBTAG00000012135	LARP1B	98	73.694	Bos_taurus
ENSSPUG00000011837	LARP1B	97	69.444	ENSCJAG00000003338	LARP1B	98	74.560	Callithrix_jacchus
ENSSPUG00000011837	LARP1B	99	69.360	ENSCAFG00000003831	LARP1B	97	70.146	Canis_familiaris
ENSSPUG00000011837	LARP1B	99	69.205	ENSCAFG00020018899	LARP1B	98	73.414	Canis_lupus_dingo
ENSSPUG00000011837	LARP1B	99	68.409	ENSCHIG00000023144	LARP1B	98	74.275	Capra_hircus
ENSSPUG00000011837	LARP1B	97	68.265	ENSCCAG00000021948	LARP1B	98	74.364	Cebus_capucinus
ENSSPUG00000011837	LARP1B	97	67.694	ENSCATG00000013541	LARP1B	98	72.515	Cercocebus_atys
ENSSPUG00000011837	LARP1B	97	68.109	ENSCSAG00000003582	LARP1B	97	68.095	Chlorocebus_sabaeus
ENSSPUG00000011837	LARP1B	97	63.268	ENSCHOG00000005354	LARP1B	97	62.329	Choloepus_hoffmanni
ENSSPUG00000011837	LARP1B	98	72.457	ENSCPBG00000017480	LARP1B	85	74.241	Chrysemys_picta_bellii
ENSSPUG00000011837	LARP1B	97	64.512	ENSCANG00000026958	LARP1B	99	67.437	Colobus_angolensis_palliatus
ENSSPUG00000011837	LARP1B	98	54.893	ENSCSEG00000013519	larp1b	83	54.989	Cynoglossus_semilaevis
ENSSPUG00000011837	LARP1B	93	55.451	ENSCVAG00000005046	larp1b	80	56.636	Cyprinodon_variegatus
ENSSPUG00000011837	LARP1B	82	58.447	ENSDARG00000061169	larp1b	73	58.271	Danio_rerio
ENSSPUG00000011837	LARP1B	73	76.789	ENSDNOG00000018765	-	100	76.848	Dasypus_novemcinctus
ENSSPUG00000011837	LARP1B	88	67.033	ENSETEG00000012497	LARP1B	85	67.033	Echinops_telfairi
ENSSPUG00000011837	LARP1B	82	62.971	ENSEBUG00000003668	larp1b	72	64.865	Eptatretus_burgeri
ENSSPUG00000011837	LARP1B	99	66.224	ENSEASG00005018106	LARP1B	98	73.716	Equus_asinus_asinus
ENSSPUG00000011837	LARP1B	99	67.452	ENSECAG00000001088	LARP1B	80	68.238	Equus_caballus
ENSSPUG00000011837	LARP1B	68	54.649	ENSELUG00000023774	larp1b	69	54.812	Esox_lucius
ENSSPUG00000011837	LARP1B	73	76.117	ENSFCAG00000014650	-	98	75.922	Felis_catus
ENSSPUG00000011837	LARP1B	99	63.537	ENSFALG00000008098	LARP1B	97	66.115	Ficedula_albicollis
ENSSPUG00000011837	LARP1B	93	56.098	ENSFHEG00000010264	larp1b	75	57.728	Fundulus_heteroclitus
ENSSPUG00000011837	LARP1B	73	64.828	ENSGMOG00000005207	larp1b	62	65.172	Gadus_morhua
ENSSPUG00000011837	LARP1B	99	65.695	ENSGALG00000010207	LARP1B	86	67.040	Gallus_gallus
ENSSPUG00000011837	LARP1B	93	56.257	ENSGAFG00000012012	larp1b	97	56.794	Gambusia_affinis
ENSSPUG00000011837	LARP1B	87	62.994	ENSGACG00000004609	larp1b	83	53.032	Gasterosteus_aculeatus
ENSSPUG00000011837	LARP1B	98	72.229	ENSGAGG00000017209	LARP1B	84	74.128	Gopherus_agassizii
ENSSPUG00000011837	LARP1B	97	67.845	ENSGGOG00000015900	LARP1B	98	73.684	Gorilla_gorilla
ENSSPUG00000011837	LARP1B	94	57.311	ENSHBUG00000009730	larp1b	81	56.839	Haplochromis_burtoni
ENSSPUG00000011837	LARP1B	77	61.561	ENSHCOG00000000918	larp1b	96	62.150	Hippocampus_comes
ENSSPUG00000011837	LARP1B	84	57.867	ENSIPUG00000012138	larp1b	75	58.065	Ictalurus_punctatus
ENSSPUG00000011837	LARP1B	92	56.780	ENSKMAG00000011589	larp1b	80	56.398	Kryptolebias_marmoratus
ENSSPUG00000011837	LARP1B	93	55.711	ENSLBEG00000005655	larp1b	81	56.018	Labrus_bergylta
ENSSPUG00000011837	LARP1B	96	66.667	ENSLACG00000015247	LARP1B	99	71.939	Latimeria_chalumnae
ENSSPUG00000011837	LARP1B	98	61.336	ENSLOCG00000010684	larp1b	92	60.931	Lepisosteus_oculatus
ENSSPUG00000011837	LARP1B	97	68.950	ENSMFAG00000002218	LARP1B	98	74.464	Macaca_fascicularis
ENSSPUG00000011837	LARP1B	97	68.836	ENSMMUG00000021347	LARP1B	98	74.269	Macaca_mulatta
ENSSPUG00000011837	LARP1B	87	70.290	ENSMNEG00000030406	LARP1B	94	70.290	Macaca_nemestrina
ENSSPUG00000011837	LARP1B	97	65.490	ENSMLEG00000009306	LARP1B	97	66.102	Mandrillus_leucophaeus
ENSSPUG00000011837	LARP1B	98	57.775	ENSMAMG00000000081	larp1b	84	57.399	Mastacembelus_armatus
ENSSPUG00000011837	LARP1B	77	63.540	ENSMZEG00005002545	larp1b	98	59.764	Maylandia_zebra
ENSSPUG00000011837	LARP1B	93	62.558	ENSMGAG00000004809	LARP1B	95	61.672	Meleagris_gallopavo
ENSSPUG00000011837	LARP1B	97	70.358	ENSMICG00000036111	LARP1B	98	77.388	Microcebus_murinus
ENSSPUG00000011837	LARP1B	73	56.863	ENSMICG00000028052	-	99	58.039	Microcebus_murinus
ENSSPUG00000011837	LARP1B	99	69.518	ENSMODG00000012300	LARP1B	80	71.256	Monodelphis_domestica
ENSSPUG00000011837	LARP1B	95	56.879	ENSMALG00000003638	larp1b	82	56.735	Monopterus_albus
ENSSPUG00000011837	LARP1B	50	70.339	MGP_CAROLIEiJ_G0024962	Larp1b	98	71.299	Mus_caroli
ENSSPUG00000011837	LARP1B	56	67.766	ENSMUSG00000025762	Larp1b	98	72.205	Mus_musculus
ENSSPUG00000011837	LARP1B	99	68.911	ENSMPUG00000017365	LARP1B	80	69.697	Mustela_putorius_furo
ENSSPUG00000011837	LARP1B	93	65.233	ENSMLUG00000010229	LARP1B	94	65.247	Myotis_lucifugus
ENSSPUG00000011837	LARP1B	77	60.829	ENSNBRG00000023846	larp1b	80	57.424	Neolamprologus_brichardi
ENSSPUG00000011837	LARP1B	97	67.312	ENSNLEG00000013819	LARP1B	98	73.294	Nomascus_leucogenys
ENSSPUG00000011837	LARP1B	87	70.000	ENSMEUG00000010308	LARP1B	87	70.330	Notamacropus_eugenii
ENSSPUG00000011837	LARP1B	92	60.628	ENSOPRG00000005478	LARP1B	91	60.024	Ochotona_princeps
ENSSPUG00000011837	LARP1B	87	67.872	ENSONIG00000012386	larp1b	81	67.872	Oreochromis_niloticus
ENSSPUG00000011837	LARP1B	99	67.083	ENSOCUG00000013330	LARP1B	97	68.013	Oryctolagus_cuniculus
ENSSPUG00000011837	LARP1B	78	62.739	ENSORLG00000017954	larp1b	81	55.995	Oryzias_latipes
ENSSPUG00000011837	LARP1B	98	54.713	ENSORLG00020013081	larp1b	81	55.859	Oryzias_latipes_hni
ENSSPUG00000011837	LARP1B	97	55.568	ENSORLG00015009580	larp1b	81	56.497	Oryzias_latipes_hsok
ENSSPUG00000011837	LARP1B	94	56.052	ENSOMEG00000004210	larp1b	80	56.186	Oryzias_melastigma
ENSSPUG00000011837	LARP1B	92	69.878	ENSOGAG00000005771	LARP1B	94	71.550	Otolemur_garnettii
ENSSPUG00000011837	LARP1B	98	68.665	ENSOARG00000015300	LARP1B	97	68.665	Ovis_aries
ENSSPUG00000011837	LARP1B	97	67.617	ENSPPAG00000030439	LARP1B	98	73.099	Pan_paniscus
ENSSPUG00000011837	LARP1B	73	76.117	ENSPPRG00000002743	-	98	75.922	Panthera_pardus
ENSSPUG00000011837	LARP1B	73	76.117	ENSPTIG00000011225	LARP1B	98	75.922	Panthera_tigris_altaica
ENSSPUG00000011837	LARP1B	97	67.731	ENSPTRG00000016437	LARP1B	98	73.294	Pan_troglodytes
ENSSPUG00000011837	LARP1B	97	68.836	ENSPANG00000012488	LARP1B	98	74.464	Papio_anubis
ENSSPUG00000011837	LARP1B	89	50.750	ENSPKIG00000014360	larp1b	87	51.195	Paramormyrops_kingsleyae
ENSSPUG00000011837	LARP1B	93	72.123	ENSPSIG00000012885	LARP1B	90	74.643	Pelodiscus_sinensis
ENSSPUG00000011837	LARP1B	78	61.699	ENSPMGG00000007207	larp1b	82	61.699	Periophthalmus_magnuspinnatus
ENSSPUG00000011837	LARP1B	74	55.954	ENSPMAG00000002700	larp1b	93	50.386	Petromyzon_marinus
ENSSPUG00000011837	LARP1B	94	73.908	ENSPCIG00000026516	LARP1B	100	72.997	Phascolarctos_cinereus
ENSSPUG00000011837	LARP1B	98	54.198	ENSPFOG00000019519	larp1b	81	55.604	Poecilia_formosa
ENSSPUG00000011837	LARP1B	83	49.756	ENSPFOG00000022837	-	86	50.325	Poecilia_formosa
ENSSPUG00000011837	LARP1B	98	55.118	ENSPLAG00000007115	larp1b	81	56.821	Poecilia_latipinna
ENSSPUG00000011837	LARP1B	98	57.062	ENSPMEG00000001224	larp1b	81	57.336	Poecilia_mexicana
ENSSPUG00000011837	LARP1B	97	66.553	ENSPCAG00000007546	LARP1B	97	66.554	Procavia_capensis
ENSSPUG00000011837	LARP1B	97	57.439	ENSPCOG00000021874	LARP1B	98	76.218	Propithecus_coquereli
ENSSPUG00000011837	LARP1B	98	64.954	ENSPVAG00000005373	LARP1B	97	64.954	Pteropus_vampyrus
ENSSPUG00000011837	LARP1B	77	62.186	ENSPNYG00000017357	larp1b	98	58.408	Pundamilia_nyererei
ENSSPUG00000011837	LARP1B	74	67.188	ENSPNAG00000008823	larp1b	80	55.649	Pygocentrus_nattereri
ENSSPUG00000011837	LARP1B	73	72.656	ENSRBIG00000039982	-	98	72.656	Rhinopithecus_bieti
ENSSPUG00000011837	LARP1B	97	68.607	ENSRROG00000030771	LARP1B	98	74.074	Rhinopithecus_roxellana
ENSSPUG00000011837	LARP1B	74	80.038	ENSSHAG00000014474	LARP1B	95	68.847	Sarcophilus_harrisii
ENSSPUG00000011837	LARP1B	85	69.757	ENSSMAG00000006347	larp1b	89	55.655	Scophthalmus_maximus
ENSSPUG00000011837	LARP1B	93	57.346	ENSSDUG00000004182	larp1b	77	59.038	Seriola_dumerili
ENSSPUG00000011837	LARP1B	77	63.609	ENSSLDG00000014613	larp1b	71	61.207	Seriola_lalandi_dorsalis
ENSSPUG00000011837	LARP1B	86	69.565	ENSSPAG00000017772	larp1b	80	57.520	Stegastes_partitus
ENSSPUG00000011837	LARP1B	99	67.116	ENSSSCG00000034280	LARP1B	95	90.110	Sus_scrofa
ENSSPUG00000011837	LARP1B	88	64.639	ENSTGUG00000002098	-	98	62.967	Taeniopygia_guttata
ENSSPUG00000011837	LARP1B	98	54.545	ENSTRUG00000005612	larp1b	81	54.864	Takifugu_rubripes
ENSSPUG00000011837	LARP1B	77	62.828	ENSTNIG00000012398	larp1b	90	54.494	Tetraodon_nigroviridis
ENSSPUG00000011837	LARP1B	79	68.771	ENSTBEG00000004177	LARP1B	79	67.010	Tupaia_belangeri
ENSSPUG00000011837	LARP1B	93	63.948	ENSTTRG00000012984	LARP1B	92	65.284	Tursiops_truncatus
ENSSPUG00000011837	LARP1B	99	69.360	ENSUMAG00000007373	LARP1B	97	70.146	Ursus_maritimus
ENSSPUG00000011837	LARP1B	91	69.231	ENSVPAG00000007223	LARP1B	82	74.054	Vicugna_pacos
ENSSPUG00000011837	LARP1B	99	69.248	ENSVVUG00000011307	LARP1B	100	75.828	Vulpes_vulpes
ENSSPUG00000011837	LARP1B	97	58.858	ENSXETG00000022512	larp1b	85	57.692	Xenopus_tropicalis
ENSSPUG00000011837	LARP1B	75	59.385	ENSXCOG00000004435	larp1b	79	54.618	Xiphophorus_couchianus
ENSSPUG00000011837	LARP1B	94	56.089	ENSXMAG00000008150	larp1b	80	56.636	Xiphophorus_maculatus