EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000011984 (Gene tree)
Gene ID: -
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 35204 bases
Position: chrQEPC01012864.1:1125129-1160332
Accession: 26407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000015502	AD	PF09793.9	2.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000016532	LSM12-201	1157	-	ENSSPUP00000015502	194 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000011984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000011984's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000011984	LSM12	99	94.819	ENSG00000161654	LSM12	99	94.819	Homo_sapiens
ENSSPUG00000011984	LSM12	100	86.735	ENSAPOG00000007907	lsm12b	100	86.735	Acanthochromis_polyacanthus
ENSSPUG00000011984	LSM12	99	92.857	ENSAMEG00000018321	LSM12	99	92.857	Ailuropoda_melanoleuca
ENSSPUG00000011984	LSM12	100	84.694	ENSACIG00000008538	lsm12b	100	84.694	Amphilophus_citrinellus
ENSSPUG00000011984	LSM12	100	86.224	ENSAOCG00000021847	lsm12b	88	86.224	Amphiprion_ocellaris
ENSSPUG00000011984	LSM12	100	86.224	ENSAPEG00000002252	lsm12b	100	86.224	Amphiprion_percula
ENSSPUG00000011984	LSM12	100	85.714	ENSATEG00000005705	lsm12b	100	85.714	Anabas_testudineus
ENSSPUG00000011984	LSM12	100	95.876	ENSACAG00000004618	LSM12	100	95.876	Anolis_carolinensis
ENSSPUG00000011984	LSM12	99	94.819	ENSANAG00000029011	LSM12	99	94.819	Aotus_nancymaae
ENSSPUG00000011984	LSM12	100	85.204	ENSACLG00000026332	lsm12b	100	85.204	Astatotilapia_calliptera
ENSSPUG00000011984	LSM12	100	84.694	ENSAMXG00000032952	lsm12b	100	84.694	Astyanax_mexicanus
ENSSPUG00000011984	LSM12	100	78.571	ENSAMXG00000036117	lsm12a	91	78.571	Astyanax_mexicanus
ENSSPUG00000011984	LSM12	99	94.819	ENSBTAG00000016252	LSM12	99	94.819	Bos_taurus
ENSSPUG00000011984	LSM12	99	94.819	ENSCJAG00000048480	LSM12	99	94.819	Callithrix_jacchus
ENSSPUG00000011984	LSM12	99	94.819	ENSCAFG00000014379	LSM12	91	94.819	Canis_familiaris
ENSSPUG00000011984	LSM12	99	94.819	ENSCAFG00020012173	LSM12	99	94.819	Canis_lupus_dingo
ENSSPUG00000011984	LSM12	99	94.819	ENSCHIG00000018175	LSM12	99	94.819	Capra_hircus
ENSSPUG00000011984	LSM12	99	94.819	ENSTSYG00000036361	LSM12	99	94.819	Carlito_syrichta
ENSSPUG00000011984	LSM12	84	90.741	ENSCAPG00000009647	LSM12	89	90.741	Cavia_aperea
ENSSPUG00000011984	LSM12	99	93.782	ENSCPOG00000012860	LSM12	100	93.578	Cavia_porcellus
ENSSPUG00000011984	LSM12	99	94.819	ENSCCAG00000032905	LSM12	99	94.819	Cebus_capucinus
ENSSPUG00000011984	LSM12	99	94.819	ENSCATG00000030577	-	99	94.819	Cercocebus_atys
ENSSPUG00000011984	LSM12	99	94.819	ENSCLAG00000015759	LSM12	99	94.819	Chinchilla_lanigera
ENSSPUG00000011984	LSM12	99	95.337	ENSCSAG00000003486	LSM12	99	95.337	Chlorocebus_sabaeus
ENSSPUG00000011984	LSM12	56	92.661	ENSCHOG00000001198	LSM12	100	92.661	Choloepus_hoffmanni
ENSSPUG00000011984	LSM12	100	97.423	ENSCPBG00000027105	LSM12	100	97.423	Chrysemys_picta_bellii
ENSSPUG00000011984	LSM12	99	94.819	ENSCANG00000043328	LSM12	99	94.819	Colobus_angolensis_palliatus
ENSSPUG00000011984	LSM12	99	94.819	ENSCGRG00001002094	Lsm12	99	94.819	Cricetulus_griseus_chok1gshd
ENSSPUG00000011984	LSM12	79	94.805	ENSCGRG00000004316	Lsm12	87	94.805	Cricetulus_griseus_crigri
ENSSPUG00000011984	LSM12	100	85.204	ENSCSEG00000008434	lsm12b	100	85.204	Cynoglossus_semilaevis
ENSSPUG00000011984	LSM12	100	85.204	ENSCVAG00000008755	lsm12b	100	85.204	Cyprinodon_variegatus
ENSSPUG00000011984	LSM12	100	77.551	ENSDARG00000028848	lsm12a	100	77.551	Danio_rerio
ENSSPUG00000011984	LSM12	100	86.224	ENSDARG00000109510	lsm12b	100	86.224	Danio_rerio
ENSSPUG00000011984	LSM12	99	95.337	ENSDNOG00000002418	LSM12	90	95.337	Dasypus_novemcinctus
ENSSPUG00000011984	LSM12	99	94.819	ENSDORG00000016381	Lsm12	99	94.819	Dipodomys_ordii
ENSSPUG00000011984	LSM12	84	33.133	FBgn0030364	Lsm12	78	32.749	Drosophila_melanogaster
ENSSPUG00000011984	LSM12	78	32.121	FBgn0036057	CG14164	87	32.121	Drosophila_melanogaster
ENSSPUG00000011984	LSM12	90	82.857	ENSETEG00000011012	-	100	82.857	Echinops_telfairi
ENSSPUG00000011984	LSM12	99	94.301	ENSETEG00000008374	LSM12	99	94.301	Echinops_telfairi
ENSSPUG00000011984	LSM12	85	64.242	ENSEBUG00000016299	lsm12a	92	64.242	Eptatretus_burgeri
ENSSPUG00000011984	LSM12	99	94.819	ENSEASG00005010155	LSM12	99	94.819	Equus_asinus_asinus
ENSSPUG00000011984	LSM12	99	94.819	ENSECAG00000009071	LSM12	99	94.819	Equus_caballus
ENSSPUG00000011984	LSM12	79	94.771	ENSEEUG00000002419	-	100	94.771	Erinaceus_europaeus
ENSSPUG00000011984	LSM12	100	82.653	ENSELUG00000000256	-	100	82.653	Esox_lucius
ENSSPUG00000011984	LSM12	100	84.184	ENSELUG00000015538	lsm12b	100	79.592	Esox_lucius
ENSSPUG00000011984	LSM12	99	94.819	ENSFCAG00000037021	LSM12	99	94.819	Felis_catus
ENSSPUG00000011984	LSM12	76	94.595	ENSFDAG00000008954	LSM12	87	94.595	Fukomys_damarensis
ENSSPUG00000011984	LSM12	100	84.184	ENSFHEG00000019913	lsm12b	100	84.184	Fundulus_heteroclitus
ENSSPUG00000011984	LSM12	81	86.076	ENSGMOG00000015449	lsm12b	100	86.076	Gadus_morhua
ENSSPUG00000011984	LSM12	79	97.386	ENSGALG00000039803	LSM12	100	97.386	Gallus_gallus
ENSSPUG00000011984	LSM12	100	84.694	ENSGAFG00000011829	lsm12b	100	84.694	Gambusia_affinis
ENSSPUG00000011984	LSM12	81	86.709	ENSGACG00000003428	lsm12b	100	86.709	Gasterosteus_aculeatus
ENSSPUG00000011984	LSM12	100	97.423	ENSGAGG00000021965	LSM12	100	97.423	Gopherus_agassizii
ENSSPUG00000011984	LSM12	99	94.819	ENSGGOG00000010589	-	99	94.819	Gorilla_gorilla
ENSSPUG00000011984	LSM12	85	84.431	ENSHBUG00000007667	lsm12b	74	84.431	Haplochromis_burtoni
ENSSPUG00000011984	LSM12	99	94.819	ENSHGLG00000011411	LSM12	99	94.819	Heterocephalus_glaber_female
ENSSPUG00000011984	LSM12	91	83.425	ENSHGLG00100000241	LSM12	96	83.425	Heterocephalus_glaber_male
ENSSPUG00000011984	LSM12	100	84.694	ENSHCOG00000002094	lsm12b	100	84.694	Hippocampus_comes
ENSSPUG00000011984	LSM12	99	74.742	ENSIPUG00000008936	lsm12a	99	74.742	Ictalurus_punctatus
ENSSPUG00000011984	LSM12	100	85.204	ENSIPUG00000014800	lsm12	100	85.204	Ictalurus_punctatus
ENSSPUG00000011984	LSM12	99	94.819	ENSSTOG00000007403	LSM12	99	94.819	Ictidomys_tridecemlineatus
ENSSPUG00000011984	LSM12	99	93.782	ENSJJAG00000004364	-	99	93.782	Jaculus_jaculus
ENSSPUG00000011984	LSM12	81	82.390	ENSJJAG00000014652	-	95	82.390	Jaculus_jaculus
ENSSPUG00000011984	LSM12	97	83.684	ENSJJAG00000011793	-	100	83.684	Jaculus_jaculus
ENSSPUG00000011984	LSM12	85	85.629	ENSKMAG00000007704	lsm12b	56	85.629	Kryptolebias_marmoratus
ENSSPUG00000011984	LSM12	100	86.224	ENSLBEG00000027999	lsm12b	100	86.224	Labrus_bergylta
ENSSPUG00000011984	LSM12	100	90.722	ENSLACG00000015981	LSM12	100	90.722	Latimeria_chalumnae
ENSSPUG00000011984	LSM12	100	86.224	ENSLOCG00000013079	lsm12b	99	86.224	Lepisosteus_oculatus
ENSSPUG00000011984	LSM12	99	94.819	ENSLAFG00000005202	LSM12	99	94.819	Loxodonta_africana
ENSSPUG00000011984	LSM12	99	94.819	ENSMFAG00000031376	LSM12	99	94.819	Macaca_fascicularis
ENSSPUG00000011984	LSM12	99	94.819	ENSMMUG00000006804	LSM12	99	94.819	Macaca_mulatta
ENSSPUG00000011984	LSM12	64	79.310	ENSMMUG00000038408	-	100	79.310	Macaca_mulatta
ENSSPUG00000011984	LSM12	64	79.310	ENSMMUG00000042106	-	100	79.310	Macaca_mulatta
ENSSPUG00000011984	LSM12	99	94.819	ENSMNEG00000030594	-	99	94.819	Macaca_nemestrina
ENSSPUG00000011984	LSM12	99	94.819	ENSMLEG00000039934	LSM12	99	94.819	Mandrillus_leucophaeus
ENSSPUG00000011984	LSM12	100	85.714	ENSMAMG00000004279	lsm12b	100	85.714	Mastacembelus_armatus
ENSSPUG00000011984	LSM12	100	85.204	ENSMZEG00005005754	lsm12b	100	85.204	Maylandia_zebra
ENSSPUG00000011984	LSM12	99	95.337	ENSMICG00000037219	LSM12	100	94.495	Microcebus_murinus
ENSSPUG00000011984	LSM12	99	94.819	ENSMOCG00000019878	-	99	94.819	Microtus_ochrogaster
ENSSPUG00000011984	LSM12	99	79.793	ENSMOCG00000017015	-	85	79.793	Microtus_ochrogaster
ENSSPUG00000011984	LSM12	100	85.714	ENSMMOG00000020848	lsm12b	100	85.714	Mola_mola
ENSSPUG00000011984	LSM12	99	86.458	ENSMALG00000007578	lsm12b	98	86.458	Monopterus_albus
ENSSPUG00000011984	LSM12	99	94.301	MGP_CAROLIEiJ_G0017241	Lsm12	99	94.301	Mus_caroli
ENSSPUG00000011984	LSM12	99	94.819	ENSMUSG00000020922	Lsm12	99	94.819	Mus_musculus
ENSSPUG00000011984	LSM12	99	87.143	MGP_PahariEiJ_G0018371	Lsm12	100	93.578	Mus_pahari
ENSSPUG00000011984	LSM12	99	94.301	MGP_SPRETEiJ_G0018084	Lsm12	99	96.429	Mus_spretus
ENSSPUG00000011984	LSM12	99	94.301	ENSMLUG00000006391	LSM12	99	94.301	Myotis_lucifugus
ENSSPUG00000011984	LSM12	99	94.819	ENSNGAG00000001870	Lsm12	99	94.819	Nannospalax_galili
ENSSPUG00000011984	LSM12	98	63.131	ENSNGAG00000015429	-	98	63.131	Nannospalax_galili
ENSSPUG00000011984	LSM12	100	85.204	ENSNBRG00000006266	lsm12b	100	85.204	Neolamprologus_brichardi
ENSSPUG00000011984	LSM12	99	94.819	ENSNLEG00000005580	-	99	94.819	Nomascus_leucogenys
ENSSPUG00000011984	LSM12	84	96.319	ENSMEUG00000007501	-	99	96.319	Notamacropus_eugenii
ENSSPUG00000011984	LSM12	99	94.819	ENSOPRG00000008552	LSM12	99	94.819	Ochotona_princeps
ENSSPUG00000011984	LSM12	100	85.128	ENSODEG00000007886	-	74	85.128	Octodon_degus
ENSSPUG00000011984	LSM12	100	94.872	ENSODEG00000017998	-	100	94.872	Octodon_degus
ENSSPUG00000011984	LSM12	100	85.204	ENSONIG00000007933	lsm12b	100	85.204	Oreochromis_niloticus
ENSSPUG00000011984	LSM12	99	88.660	ENSOCUG00000027889	-	100	88.660	Oryctolagus_cuniculus
ENSSPUG00000011984	LSM12	99	88.660	ENSOCUG00000021254	-	100	88.660	Oryctolagus_cuniculus
ENSSPUG00000011984	LSM12	99	92.857	ENSOCUG00000008566	-	99	92.857	Oryctolagus_cuniculus
ENSSPUG00000011984	LSM12	99	87.629	ENSOCUG00000024823	-	100	87.629	Oryctolagus_cuniculus
ENSSPUG00000011984	LSM12	100	85.714	ENSORLG00000011310	lsm12b	100	85.714	Oryzias_latipes
ENSSPUG00000011984	LSM12	100	85.714	ENSORLG00020002060	lsm12b	92	85.714	Oryzias_latipes_hni
ENSSPUG00000011984	LSM12	100	85.714	ENSORLG00015001647	lsm12b	92	85.714	Oryzias_latipes_hsok
ENSSPUG00000011984	LSM12	100	85.714	ENSOMEG00000006184	lsm12b	92	85.714	Oryzias_melastigma
ENSSPUG00000011984	LSM12	99	95.337	ENSOGAG00000010489	LSM12	99	95.337	Otolemur_garnettii
ENSSPUG00000011984	LSM12	99	91.457	ENSOARG00000006589	LSM12	99	91.457	Ovis_aries
ENSSPUG00000011984	LSM12	99	84.974	ENSPPAG00000034974	-	92	95.455	Pan_paniscus
ENSSPUG00000011984	LSM12	99	94.819	ENSPPRG00000023420	LSM12	99	94.819	Panthera_pardus
ENSSPUG00000011984	LSM12	79	94.771	ENSPTIG00000012704	-	82	94.771	Panthera_tigris_altaica
ENSSPUG00000011984	LSM12	73	90.090	ENSPTIG00000014850	-	100	90.090	Panthera_tigris_altaica
ENSSPUG00000011984	LSM12	99	94.819	ENSPTRG00000009261	LSM12	99	94.819	Pan_troglodytes
ENSSPUG00000011984	LSM12	99	94.819	ENSPANG00000021315	-	99	94.819	Papio_anubis
ENSSPUG00000011984	LSM12	99	76.042	ENSPKIG00000017932	-	98	76.042	Paramormyrops_kingsleyae
ENSSPUG00000011984	LSM12	100	85.204	ENSPKIG00000021058	lsm12b	100	85.204	Paramormyrops_kingsleyae
ENSSPUG00000011984	LSM12	100	85.204	ENSPMGG00000021344	lsm12b	100	85.204	Periophthalmus_magnuspinnatus
ENSSPUG00000011984	LSM12	99	94.819	ENSPEMG00000012199	Lsm12	99	94.819	Peromyscus_maniculatus_bairdii
ENSSPUG00000011984	LSM12	89	66.474	ENSPMAG00000005461	lsm12a	99	66.474	Petromyzon_marinus
ENSSPUG00000011984	LSM12	99	95.855	ENSPCIG00000020244	LSM12	99	95.855	Phascolarctos_cinereus
ENSSPUG00000011984	LSM12	100	83.673	ENSPFOG00000015930	lsm12b	100	83.673	Poecilia_formosa
ENSSPUG00000011984	LSM12	100	83.673	ENSPLAG00000021089	lsm12b	100	83.673	Poecilia_latipinna
ENSSPUG00000011984	LSM12	100	83.673	ENSPMEG00000012961	lsm12b	100	83.673	Poecilia_mexicana
ENSSPUG00000011984	LSM12	88	86.550	ENSPREG00000010236	lsm12b	95	86.550	Poecilia_reticulata
ENSSPUG00000011984	LSM12	99	94.819	ENSPPYG00000008344	LSM12	99	94.819	Pongo_abelii
ENSSPUG00000011984	LSM12	82	96.855	ENSPCAG00000008790	LSM12	100	96.855	Procavia_capensis
ENSSPUG00000011984	LSM12	99	94.819	ENSPCOG00000027951	LSM12	99	94.819	Propithecus_coquereli
ENSSPUG00000011984	LSM12	99	94.301	ENSPVAG00000013706	LSM12	99	94.301	Pteropus_vampyrus
ENSSPUG00000011984	LSM12	100	85.204	ENSPNYG00000003386	lsm12b	100	85.204	Pundamilia_nyererei
ENSSPUG00000011984	LSM12	100	84.184	ENSPNAG00000004186	lsm12b	100	84.184	Pygocentrus_nattereri
ENSSPUG00000011984	LSM12	100	78.061	ENSPNAG00000018435	lsm12a	100	78.061	Pygocentrus_nattereri
ENSSPUG00000011984	LSM12	99	94.819	ENSRNOG00000020894	Lsm12	99	94.819	Rattus_norvegicus
ENSSPUG00000011984	LSM12	99	94.819	ENSRBIG00000027910	LSM12	99	94.819	Rhinopithecus_bieti
ENSSPUG00000011984	LSM12	99	56.995	ENSRROG00000000537	-	98	56.995	Rhinopithecus_roxellana
ENSSPUG00000011984	LSM12	99	94.819	ENSRROG00000045530	-	99	94.819	Rhinopithecus_roxellana
ENSSPUG00000011984	LSM12	99	94.819	ENSSBOG00000025310	LSM12	99	94.819	Saimiri_boliviensis_boliviensis
ENSSPUG00000011984	LSM12	81	94.304	ENSSHAG00000014914	LSM12	100	94.304	Sarcophilus_harrisii
ENSSPUG00000011984	LSM12	100	82.653	ENSSFOG00015020392	lsm12a	100	82.653	Scleropages_formosus
ENSSPUG00000011984	LSM12	100	84.184	ENSSFOG00015009612	lsm12	100	84.184	Scleropages_formosus
ENSSPUG00000011984	LSM12	100	85.714	ENSSMAG00000008089	lsm12b	100	85.714	Scophthalmus_maximus
ENSSPUG00000011984	LSM12	100	86.735	ENSSDUG00000012711	lsm12b	100	86.735	Seriola_dumerili
ENSSPUG00000011984	LSM12	100	86.735	ENSSLDG00000007404	lsm12b	100	86.735	Seriola_lalandi_dorsalis
ENSSPUG00000011984	LSM12	79	94.118	ENSSARG00000005537	LSM12	100	94.118	Sorex_araneus
ENSSPUG00000011984	LSM12	100	86.224	ENSSPAG00000017058	lsm12b	100	86.224	Stegastes_partitus
ENSSPUG00000011984	LSM12	99	94.819	ENSSSCG00000032394	LSM12	99	94.819	Sus_scrofa
ENSSPUG00000011984	LSM12	100	84.694	ENSTRUG00000007121	lsm12b	100	84.694	Takifugu_rubripes
ENSSPUG00000011984	LSM12	100	85.204	ENSTNIG00000014436	lsm12b	100	85.204	Tetraodon_nigroviridis
ENSSPUG00000011984	LSM12	99	91.192	ENSTBEG00000012392	-	99	91.192	Tupaia_belangeri
ENSSPUG00000011984	LSM12	99	94.301	ENSTBEG00000012523	-	99	94.301	Tupaia_belangeri
ENSSPUG00000011984	LSM12	99	94.819	ENSTTRG00000010433	LSM12	99	94.819	Tursiops_truncatus
ENSSPUG00000011984	LSM12	99	94.819	ENSUAMG00000006313	LSM12	99	94.819	Ursus_americanus
ENSSPUG00000011984	LSM12	81	91.772	ENSUMAG00000012987	LSM12	90	91.772	Ursus_maritimus
ENSSPUG00000011984	LSM12	99	90.155	ENSVPAG00000011145	LSM12	99	90.155	Vicugna_pacos
ENSSPUG00000011984	LSM12	99	94.819	ENSVVUG00000017581	LSM12	99	94.819	Vulpes_vulpes
ENSSPUG00000011984	LSM12	83	65.217	ENSXETG00000003371	lsm12	78	65.217	Xenopus_tropicalis
ENSSPUG00000011984	LSM12	100	84.694	ENSXCOG00000003994	lsm12b	100	84.694	Xiphophorus_couchianus
ENSSPUG00000011984	LSM12	100	84.694	ENSXMAG00000020950	lsm12b	100	84.694	Xiphophorus_maculatus