EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000012053 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 2935 bases
Position: chrQEPC01014402.1:9150191-9153125
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000015600	RNase_T	PF00929.24	3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000016635	-	1561	-	ENSSPUP00000015600	368 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000012053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000012053's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000012053	-	81	44.058	ENSSPUG00000000985	ISG20L2	94	44.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000012053	-	60	55.000	ENSAPOG00000008681	-	62	54.545	Acanthochromis_polyacanthus
ENSSPUG00000012053	-	60	55.856	ENSACIG00000012040	isg20	100	53.659	Amphilophus_citrinellus
ENSSPUG00000012053	-	60	53.636	ENSAOCG00000002636	isg20	62	53.182	Amphiprion_ocellaris
ENSSPUG00000012053	-	60	53.636	ENSAPEG00000012004	isg20	62	53.182	Amphiprion_percula
ENSSPUG00000012053	-	60	56.364	ENSATEG00000021719	isg20	73	49.265	Anabas_testudineus
ENSSPUG00000012053	-	54	59.296	ENSACAG00000013905	-	100	46.505	Anolis_carolinensis
ENSSPUG00000012053	-	60	53.636	ENSACLG00000023402	isg20	63	53.182	Astatotilapia_calliptera
ENSSPUG00000012053	-	60	51.351	ENSAMXG00000041093	isg20	57	51.802	Astyanax_mexicanus
ENSSPUG00000012053	-	53	39.000	ENSCING00000004431	-	95	38.500	Ciona_intestinalis
ENSSPUG00000012053	-	60	52.252	ENSCSEG00000000768	isg20	64	51.802	Cynoglossus_semilaevis
ENSSPUG00000012053	-	77	44.170	ENSCVAG00000009300	isg20	98	51.442	Cyprinodon_variegatus
ENSSPUG00000012053	-	60	50.679	ENSDARG00000079783	isg20	64	50.226	Danio_rerio
ENSSPUG00000012053	-	82	43.312	ENSDARG00000102266	isg20l2	89	43.269	Danio_rerio
ENSSPUG00000012053	-	65	42.023	ENSEBUG00000010461	ISG20	98	41.516	Eptatretus_burgeri
ENSSPUG00000012053	-	60	55.000	ENSELUG00000003116	isg20	58	55.000	Esox_lucius
ENSSPUG00000012053	-	68	45.522	ENSFHEG00000018658	isg20	98	46.108	Fundulus_heteroclitus
ENSSPUG00000012053	-	60	50.000	ENSGMOG00000001258	isg20	99	49.315	Gadus_morhua
ENSSPUG00000012053	-	56	69.903	ENSGALG00000044204	ISG20	82	69.903	Gallus_gallus
ENSSPUG00000012053	-	63	50.215	ENSGAFG00000005685	isg20	99	47.879	Gambusia_affinis
ENSSPUG00000012053	-	83	42.857	ENSGACG00000007047	isg20	98	42.357	Gasterosteus_aculeatus
ENSSPUG00000012053	-	60	53.182	ENSHBUG00000008380	isg20	63	52.727	Haplochromis_burtoni
ENSSPUG00000012053	-	60	51.584	ENSIPUG00000003320	isg20	62	50.667	Ictalurus_punctatus
ENSSPUG00000012053	-	63	50.000	ENSKMAG00000006695	isg20	63	51.818	Kryptolebias_marmoratus
ENSSPUG00000012053	-	60	53.153	ENSLBEG00000004494	isg20	63	52.252	Labrus_bergylta
ENSSPUG00000012053	-	63	57.261	ENSLACG00000018339	-	85	55.833	Latimeria_chalumnae
ENSSPUG00000012053	-	60	61.086	ENSLOCG00000014240	isg20	99	61.086	Lepisosteus_oculatus
ENSSPUG00000012053	-	60	55.455	ENSMAMG00000023057	isg20	62	55.000	Mastacembelus_armatus
ENSSPUG00000012053	-	60	53.636	ENSMZEG00005011688	isg20	63	53.182	Maylandia_zebra
ENSSPUG00000012053	-	60	49.339	ENSMMOG00000019013	isg20	92	58.889	Mola_mola
ENSSPUG00000012053	-	60	54.091	ENSMALG00000016734	isg20	63	53.636	Monopterus_albus
ENSSPUG00000012053	-	60	53.636	ENSNBRG00000016499	isg20	63	53.182	Neolamprologus_brichardi
ENSSPUG00000012053	-	60	54.091	ENSONIG00000015622	isg20	62	53.636	Oreochromis_niloticus
ENSSPUG00000012053	-	62	53.509	ENSORLG00020002307	isg20	66	53.070	Oryzias_latipes_hni
ENSSPUG00000012053	-	62	53.509	ENSORLG00015016089	isg20	94	52.288	Oryzias_latipes_hsok
ENSSPUG00000012053	-	62	52.632	ENSOMEG00000003990	isg20	95	55.090	Oryzias_melastigma
ENSSPUG00000012053	-	93	40.896	ENSPKIG00000015180	isg20	91	40.896	Paramormyrops_kingsleyae
ENSSPUG00000012053	-	54	48.731	ENSPMGG00000021232	isg20	96	48.223	Periophthalmus_magnuspinnatus
ENSSPUG00000012053	-	63	49.787	ENSPFOG00000003318	isg20	68	49.787	Poecilia_formosa
ENSSPUG00000012053	-	63	49.789	ENSPLAG00000005932	isg20	96	51.531	Poecilia_latipinna
ENSSPUG00000012053	-	63	49.787	ENSPMEG00000016899	isg20	88	52.475	Poecilia_mexicana
ENSSPUG00000012053	-	60	53.636	ENSPNYG00000010204	isg20	63	53.182	Pundamilia_nyererei
ENSSPUG00000012053	-	60	52.252	ENSPNAG00000022301	isg20	60	52.252	Pygocentrus_nattereri
ENSSPUG00000012053	-	70	47.710	ENSSFOG00015018481	isg20	82	43.155	Scleropages_formosus
ENSSPUG00000012053	-	60	54.091	ENSSMAG00000004520	isg20	68	53.636	Scophthalmus_maximus
ENSSPUG00000012053	-	60	55.000	ENSSDUG00000000366	isg20	62	54.545	Seriola_dumerili
ENSSPUG00000012053	-	60	55.656	ENSSLDG00000003333	-	62	54.545	Seriola_lalandi_dorsalis
ENSSPUG00000012053	-	60	55.656	ENSSLDG00000002860	isg20	62	54.545	Seriola_lalandi_dorsalis
ENSSPUG00000012053	-	81	43.189	ENSSPAG00000020558	isg20	82	42.857	Stegastes_partitus
ENSSPUG00000012053	-	68	50.195	ENSTRUG00000015658	isg20	69	49.805	Takifugu_rubripes
ENSSPUG00000012053	-	52	52.105	ENSTNIG00000010389	isg20	93	51.579	Tetraodon_nigroviridis
ENSSPUG00000012053	-	53	65.306	ENSXETG00000007588	aen	85	62.673	Xenopus_tropicalis
ENSSPUG00000012053	-	63	50.215	ENSXMAG00000013066	isg20	68	50.215	Xiphophorus_maculatus