EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000012179 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 126516 bases
Position: chrQEPC01011131.1:2860793-2987308
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000015869	La	PF05383.17	5.3e-21	1	1
ENSSPUP00000015880	La	PF05383.17	5.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000016929	-	3237	-	ENSSPUP00000015880	1078 (aa)	-	-
ENSSPUT00000016916	-	3273	-	ENSSPUP00000015869	1090 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000012179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000012179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000012179	-	79	57.973	ENSSPUG00000011837	LARP1B	98	57.078

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000012179	-	87	80.348	ENSG00000155506	LARP1	89	91.975	Homo_sapiens
ENSSPUG00000012179	-	88	83.857	ENSAPOG00000020685	larp1	98	84.793	Acanthochromis_polyacanthus
ENSSPUG00000012179	-	85	81.244	ENSAMEG00000016673	LARP1	100	81.198	Ailuropoda_melanoleuca
ENSSPUG00000012179	-	99	62.795	ENSACIG00000012994	larp1	99	62.489	Amphilophus_citrinellus
ENSSPUG00000012179	-	74	74.292	ENSAOCG00000007792	larp1	99	73.672	Amphiprion_ocellaris
ENSSPUG00000012179	-	98	66.973	ENSAPEG00000022246	larp1	99	66.575	Amphiprion_percula
ENSSPUG00000012179	-	97	64.728	ENSATEG00000013523	larp1	99	65.825	Anabas_testudineus
ENSSPUG00000012179	-	79	93.288	ENSAPLG00000007559	LARP1	99	93.288	Anas_platyrhynchos
ENSSPUG00000012179	-	85	88.730	ENSACAG00000004071	LARP1	100	91.226	Anolis_carolinensis
ENSSPUG00000012179	-	87	80.450	ENSANAG00000029949	LARP1	100	77.938	Aotus_nancymaae
ENSSPUG00000012179	-	99	66.815	ENSACLG00000015256	larp1	99	70.113	Astatotilapia_calliptera
ENSSPUG00000012179	-	96	69.405	ENSAMXG00000000859	larp1	98	68.885	Astyanax_mexicanus
ENSSPUG00000012179	-	100	75.133	ENSBTAG00000008443	LARP1	100	74.451	Bos_taurus
ENSSPUG00000012179	-	100	75.530	ENSCJAG00000004454	LARP1	96	79.676	Callithrix_jacchus
ENSSPUG00000012179	-	85	81.497	ENSCAFG00000017639	LARP1	99	81.451	Canis_familiaris
ENSSPUG00000012179	-	80	81.395	ENSCAFG00020023860	LARP1	100	81.347	Canis_lupus_dingo
ENSSPUG00000012179	-	100	74.712	ENSCHIG00000014414	LARP1	100	72.598	Capra_hircus
ENSSPUG00000012179	-	90	78.445	ENSTSYG00000013732	LARP1	99	78.958	Carlito_syrichta
ENSSPUG00000012179	-	74	81.340	ENSCAPG00000013865	LARP1	86	81.376	Cavia_aperea
ENSSPUG00000012179	-	85	81.497	ENSCPOG00000003377	LARP1	100	81.451	Cavia_porcellus
ENSSPUG00000012179	-	100	74.823	ENSCCAG00000025201	LARP1	95	80.306	Cebus_capucinus
ENSSPUG00000012179	-	100	72.880	ENSCATG00000030675	LARP1	96	79.234	Cercocebus_atys
ENSSPUG00000012179	-	88	80.080	ENSCLAG00000012755	LARP1	99	79.980	Chinchilla_lanigera
ENSSPUG00000012179	-	80	78.222	ENSCSAG00000010800	LARP1	100	78.184	Chlorocebus_sabaeus
ENSSPUG00000012179	-	80	75.988	ENSCHOG00000012716	LARP1	91	75.988	Choloepus_hoffmanni
ENSSPUG00000012179	-	97	92.877	ENSCPBG00000002173	LARP1	100	92.593	Chrysemys_picta_bellii
ENSSPUG00000012179	-	86	80.390	ENSCANG00000037418	LARP1	96	79.435	Colobus_angolensis_palliatus
ENSSPUG00000012179	-	100	74.889	ENSCGRG00001016913	Larp1	100	74.202	Cricetulus_griseus_chok1gshd
ENSSPUG00000012179	-	81	79.412	ENSCGRG00000009916	Larp1	99	79.412	Cricetulus_griseus_crigri
ENSSPUG00000012179	-	97	67.004	ENSCSEG00000016431	larp1	99	66.187	Cynoglossus_semilaevis
ENSSPUG00000012179	-	99	65.742	ENSCVAG00000022687	larp1	98	64.911	Cyprinodon_variegatus
ENSSPUG00000012179	-	88	67.917	ENSDARG00000101722	larp1	95	68.244	Danio_rerio
ENSSPUG00000012179	-	100	75.220	ENSDNOG00000012073	LARP1	100	74.343	Dasypus_novemcinctus
ENSSPUG00000012179	-	85	78.898	ENSDORG00000002897	Larp1	99	79.002	Dipodomys_ordii
ENSSPUG00000012179	-	78	83.314	ENSETEG00000020251	LARP1	100	83.201	Echinops_telfairi
ENSSPUG00000012179	-	100	75.066	ENSEASG00005001070	LARP1	100	74.301	Equus_asinus_asinus
ENSSPUG00000012179	-	100	75.066	ENSECAG00000017002	LARP1	78	76.056	Equus_caballus
ENSSPUG00000012179	-	83	77.046	ENSEEUG00000001065	LARP1	100	77.013	Erinaceus_europaeus
ENSSPUG00000012179	-	99	66.458	ENSELUG00000019403	larp1	99	66.190	Esox_lucius
ENSSPUG00000012179	-	100	75.420	ENSFCAG00000000592	LARP1	100	74.803	Felis_catus
ENSSPUG00000012179	-	74	93.588	ENSFALG00000008335	LARP1	100	93.276	Ficedula_albicollis
ENSSPUG00000012179	-	85	81.582	ENSFDAG00000021125	LARP1	100	81.535	Fukomys_damarensis
ENSSPUG00000012179	-	64	59.091	ENSFHEG00000020307	larp1	92	67.976	Fundulus_heteroclitus
ENSSPUG00000012179	-	100	86.984	ENSGALG00000040109	LARP1	100	87.259	Gallus_gallus
ENSSPUG00000012179	-	100	91.222	ENSGAGG00000025113	LARP1	99	93.687	Gopherus_agassizii
ENSSPUG00000012179	-	85	81.289	ENSGGOG00000006048	LARP1	93	81.244	Gorilla_gorilla
ENSSPUG00000012179	-	99	67.203	ENSHBUG00000020762	larp1	98	72.960	Haplochromis_burtoni
ENSSPUG00000012179	-	100	73.675	ENSHGLG00000006267	LARP1	100	73.656	Heterocephalus_glaber_female
ENSSPUG00000012179	-	85	69.905	ENSHGLG00100003395	-	90	68.224	Heterocephalus_glaber_male
ENSSPUG00000012179	-	85	81.393	ENSHGLG00100014230	-	100	81.393	Heterocephalus_glaber_male
ENSSPUG00000012179	-	91	82.353	ENSHCOG00000010786	larp1	99	81.579	Hippocampus_comes
ENSSPUG00000012179	-	88	69.048	ENSIPUG00000019105	Larp1	93	70.474	Ictalurus_punctatus
ENSSPUG00000012179	-	85	78.898	ENSSTOG00000005678	LARP1	99	78.964	Ictidomys_tridecemlineatus
ENSSPUG00000012179	-	100	70.483	ENSJJAG00000016950	Larp1	100	70.275	Jaculus_jaculus
ENSSPUG00000012179	-	97	67.463	ENSKMAG00000018468	larp1	98	70.582	Kryptolebias_marmoratus
ENSSPUG00000012179	-	99	65.665	ENSLBEG00000027172	larp1	99	65.732	Labrus_bergylta
ENSSPUG00000012179	-	94	72.042	ENSLOCG00000012457	larp1	94	79.241	Lepisosteus_oculatus
ENSSPUG00000012179	-	100	74.230	ENSLAFG00000008991	LARP1	100	74.032	Loxodonta_africana
ENSSPUG00000012179	-	87	79.939	ENSMFAG00000031651	LARP1	96	79.234	Macaca_fascicularis
ENSSPUG00000012179	-	85	78.252	ENSMMUG00000009411	LARP1	99	78.216	Macaca_mulatta
ENSSPUG00000012179	-	86	77.287	ENSMNEG00000039294	LARP1	100	80.642	Macaca_nemestrina
ENSSPUG00000012179	-	86	80.493	ENSMLEG00000035142	LARP1	96	79.335	Mandrillus_leucophaeus
ENSSPUG00000012179	-	99	66.574	ENSMAMG00000021788	larp1	98	66.390	Mastacembelus_armatus
ENSSPUG00000012179	-	99	66.815	ENSMZEG00005009345	larp1	99	70.113	Maylandia_zebra
ENSSPUG00000012179	-	85	92.217	ENSMGAG00000005696	LARP1	100	92.217	Meleagris_gallopavo
ENSSPUG00000012179	-	100	73.913	ENSMAUG00000001385	Larp1	100	74.113	Mesocricetus_auratus
ENSSPUG00000012179	-	85	80.289	ENSMICG00000000837	LARP1	99	81.305	Microcebus_murinus
ENSSPUG00000012179	-	100	74.823	ENSMOCG00000008920	Larp1	100	74.291	Microtus_ochrogaster
ENSSPUG00000012179	-	96	52.412	ENSMMOG00000013364	larp1	96	54.882	Mola_mola
ENSSPUG00000012179	-	85	84.519	ENSMODG00000008663	LARP1	99	84.414	Monodelphis_domestica
ENSSPUG00000012179	-	99	65.608	ENSMALG00000017180	larp1	98	70.362	Monopterus_albus
ENSSPUG00000012179	-	89	79.703	MGP_CAROLIEiJ_G0016383	Larp1	100	73.759	Mus_caroli
ENSSPUG00000012179	-	88	80.341	ENSMUSG00000037331	Larp1	99	74.260	Mus_musculus
ENSSPUG00000012179	-	100	73.717	MGP_PahariEiJ_G0017518	Larp1	100	73.628	Mus_pahari
ENSSPUG00000012179	-	99	74.327	MGP_SPRETEiJ_G0017225	Larp1	99	74.350	Mus_spretus
ENSSPUG00000012179	-	83	74.434	ENSMPUG00000013564	LARP1	99	73.397	Mustela_putorius_furo
ENSSPUG00000012179	-	84	78.311	ENSMLUG00000002608	LARP1	100	78.311	Myotis_lucifugus
ENSSPUG00000012179	-	85	77.824	ENSNGAG00000001098	Larp1	99	77.617	Nannospalax_galili
ENSSPUG00000012179	-	84	72.318	ENSNBRG00000008963	larp1	94	72.193	Neolamprologus_brichardi
ENSSPUG00000012179	-	86	79.317	ENSNLEG00000016588	LARP1	99	78.632	Nomascus_leucogenys
ENSSPUG00000012179	-	85	78.390	ENSMEUG00000002957	LARP1	100	78.224	Notamacropus_eugenii
ENSSPUG00000012179	-	85	81.081	ENSOPRG00000013014	LARP1	100	80.829	Ochotona_princeps
ENSSPUG00000012179	-	86	80.840	ENSODEG00000010824	LARP1	100	81.554	Octodon_degus
ENSSPUG00000012179	-	88	86.377	ENSOANG00000005096	LARP1	100	86.983	Ornithorhynchus_anatinus
ENSSPUG00000012179	-	100	76.110	ENSOCUG00000013066	LARP1	100	75.621	Oryctolagus_cuniculus
ENSSPUG00000012179	-	99	64.659	ENSORLG00000000824	larp1	99	73.109	Oryzias_latipes
ENSSPUG00000012179	-	99	64.805	ENSORLG00020022241	larp1	99	64.585	Oryzias_latipes_hni
ENSSPUG00000012179	-	99	63.369	ENSORLG00015007538	larp1	99	63.059	Oryzias_latipes_hsok
ENSSPUG00000012179	-	99	64.171	ENSOMEG00000003134	larp1	99	63.417	Oryzias_melastigma
ENSSPUG00000012179	-	85	81.393	ENSOGAG00000016750	LARP1	100	81.185	Otolemur_garnettii
ENSSPUG00000012179	-	85	79.396	ENSOARG00000009893	LARP1	99	79.271	Ovis_aries
ENSSPUG00000012179	-	87	80.348	ENSPPAG00000042993	LARP1	95	80.306	Pan_paniscus
ENSSPUG00000012179	-	87	78.819	ENSPPRG00000009780	LARP1	95	77.947	Panthera_pardus
ENSSPUG00000012179	-	90	76.870	ENSPTIG00000007013	LARP1	95	78.354	Panthera_tigris_altaica
ENSSPUG00000012179	-	100	73.033	ENSPTRG00000017447	LARP1	95	80.102	Pan_troglodytes
ENSSPUG00000012179	-	100	72.880	ENSPANG00000008080	LARP1	94	80.765	Papio_anubis
ENSSPUG00000012179	-	96	63.714	ENSPKIG00000017153	-	99	64.000	Paramormyrops_kingsleyae
ENSSPUG00000012179	-	99	68.107	ENSPKIG00000010096	larp1	99	68.658	Paramormyrops_kingsleyae
ENSSPUG00000012179	-	84	70.410	ENSPMGG00000011599	larp1	93	71.868	Periophthalmus_magnuspinnatus
ENSSPUG00000012179	-	85	78.527	ENSPEMG00000022523	Larp1	99	78.527	Peromyscus_maniculatus_bairdii
ENSSPUG00000012179	-	98	79.577	ENSPCIG00000019242	LARP1	91	79.633	Phascolarctos_cinereus
ENSSPUG00000012179	-	99	64.136	ENSPFOG00000005836	larp1	99	63.739	Poecilia_formosa
ENSSPUG00000012179	-	99	64.805	ENSPLAG00000008936	larp1	99	64.368	Poecilia_latipinna
ENSSPUG00000012179	-	99	64.505	ENSPMEG00000013656	larp1	99	64.111	Poecilia_mexicana
ENSSPUG00000012179	-	85	68.496	ENSPREG00000005726	larp1	99	68.807	Poecilia_reticulata
ENSSPUG00000012179	-	85	78.206	ENSPCAG00000006407	LARP1	100	78.206	Procavia_capensis
ENSSPUG00000012179	-	85	73.493	ENSPCOG00000016949	LARP1	100	76.373	Propithecus_coquereli
ENSSPUG00000012179	-	100	74.624	ENSPVAG00000002262	LARP1	100	73.803	Pteropus_vampyrus
ENSSPUG00000012179	-	99	67.023	ENSPNYG00000007938	larp1	99	70.113	Pundamilia_nyererei
ENSSPUG00000012179	-	91	70.489	ENSPNAG00000021427	larp1	92	73.958	Pygocentrus_nattereri
ENSSPUG00000012179	-	85	78.653	ENSRNOG00000031544	Larp1	99	78.549	Rattus_norvegicus
ENSSPUG00000012179	-	88	79.217	ENSRBIG00000038005	LARP1	95	79.898	Rhinopithecus_bieti
ENSSPUG00000012179	-	88	79.217	ENSRROG00000034073	LARP1	100	80.642	Rhinopithecus_roxellana
ENSSPUG00000012179	-	85	81.354	ENSSBOG00000019816	LARP1	100	78.653	Saimiri_boliviensis_boliviensis
ENSSPUG00000012179	-	85	86.211	ENSSHAG00000011115	LARP1	100	86.105	Sarcophilus_harrisii
ENSSPUG00000012179	-	99	66.728	ENSSFOG00015018058	-	99	66.393	Scleropages_formosus
ENSSPUG00000012179	-	86	70.812	ENSSFOG00015020304	larp1	95	69.605	Scleropages_formosus
ENSSPUG00000012179	-	93	65.692	ENSSMAG00000007468	larp1	98	65.988	Scophthalmus_maximus
ENSSPUG00000012179	-	99	65.374	ENSSDUG00000000268	larp1	97	72.242	Seriola_dumerili
ENSSPUG00000012179	-	78	72.474	ENSSLDG00000016505	larp1	97	72.358	Seriola_lalandi_dorsalis
ENSSPUG00000012179	-	55	84.083	ENSSARG00000013907	-	88	84.192	Sorex_araneus
ENSSPUG00000012179	-	99	66.519	ENSSPAG00000003910	larp1	99	65.841	Stegastes_partitus
ENSSPUG00000012179	-	100	74.713	ENSSSCG00000017069	LARP1	100	80.816	Sus_scrofa
ENSSPUG00000012179	-	81	91.228	ENSTGUG00000000704	LARP1	100	91.228	Taeniopygia_guttata
ENSSPUG00000012179	-	99	65.940	ENSTRUG00000009470	larp1	99	65.402	Takifugu_rubripes
ENSSPUG00000012179	-	78	81.828	ENSTBEG00000003381	LARP1	100	81.828	Tupaia_belangeri
ENSSPUG00000012179	-	84	80.987	ENSTTRG00000015934	LARP1	100	80.933	Tursiops_truncatus
ENSSPUG00000012179	-	100	75.155	ENSUAMG00000019334	LARP1	100	74.541	Ursus_americanus
ENSSPUG00000012179	-	84	79.641	ENSUMAG00000002934	LARP1	96	83.897	Ursus_maritimus
ENSSPUG00000012179	-	80	81.395	ENSVVUG00000004644	LARP1	100	81.347	Vulpes_vulpes
ENSSPUG00000012179	-	91	78.119	ENSXETG00000008413	larp1	94	79.938	Xenopus_tropicalis
ENSSPUG00000012179	-	86	75.372	ENSXCOG00000004022	larp1	98	75.237	Xiphophorus_couchianus
ENSSPUG00000012179	-	99	64.161	ENSXMAG00000018780	larp1	99	64.279	Xiphophorus_maculatus