EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000012447 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 124004 bases
Position: chrQEPC01012556.1:3705935-3829938
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000016134	Npa1	PF11707.8	2.4e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000017198	URB1-201	6741	-	ENSSPUP00000016134	2246 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000012447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000012447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000012447	URB1	99	55.342	ENSG00000142207	URB1	99	55.139	Homo_sapiens
ENSSPUG00000012447	URB1	97	50.648	ENSAPOG00000020308	urb1	99	50.648	Acanthochromis_polyacanthus
ENSSPUG00000012447	URB1	99	55.009	ENSAMEG00000011998	URB1	99	54.989	Ailuropoda_melanoleuca
ENSSPUG00000012447	URB1	96	45.417	ENSACIG00000003248	urb1	98	45.372	Amphilophus_citrinellus
ENSSPUG00000012447	URB1	99	42.515	ENSAOCG00000010364	urb1	99	42.602	Amphiprion_ocellaris
ENSSPUG00000012447	URB1	97	55.094	ENSAPEG00000010758	urb1	99	55.094	Amphiprion_percula
ENSSPUG00000012447	URB1	100	44.369	ENSATEG00000011790	urb1	99	44.369	Anabas_testudineus
ENSSPUG00000012447	URB1	96	68.866	ENSAPLG00000012791	URB1	99	68.866	Anas_platyrhynchos
ENSSPUG00000012447	URB1	99	66.026	ENSACAG00000002817	URB1	99	66.055	Anolis_carolinensis
ENSSPUG00000012447	URB1	99	55.875	ENSANAG00000024617	URB1	99	55.517	Aotus_nancymaae
ENSSPUG00000012447	URB1	99	46.309	ENSACLG00000024865	urb1	99	46.070	Astatotilapia_calliptera
ENSSPUG00000012447	URB1	99	40.629	ENSAMXG00000012306	urb1	99	40.794	Astyanax_mexicanus
ENSSPUG00000012447	URB1	100	53.692	ENSBTAG00000012412	URB1	99	53.713	Bos_taurus
ENSSPUG00000012447	URB1	99	55.766	ENSCJAG00000009118	URB1	99	55.228	Callithrix_jacchus
ENSSPUG00000012447	URB1	100	55.715	ENSCAFG00000008892	URB1	99	55.739	Canis_familiaris
ENSSPUG00000012447	URB1	99	55.366	ENSCAFG00020025994	-	99	55.366	Canis_lupus_dingo
ENSSPUG00000012447	URB1	99	55.565	ENSCAFG00020025987	-	99	55.565	Canis_lupus_dingo
ENSSPUG00000012447	URB1	100	53.602	ENSCHIG00000015645	URB1	99	53.443	Capra_hircus
ENSSPUG00000012447	URB1	99	55.377	ENSTSYG00000013286	URB1	99	55.150	Carlito_syrichta
ENSSPUG00000012447	URB1	98	53.551	ENSCAPG00000015589	URB1	99	53.411	Cavia_aperea
ENSSPUG00000012447	URB1	99	54.345	ENSCPOG00000006748	URB1	98	54.237	Cavia_porcellus
ENSSPUG00000012447	URB1	99	55.643	ENSCCAG00000021299	URB1	99	55.643	Cebus_capucinus
ENSSPUG00000012447	URB1	99	55.873	ENSCATG00000042630	URB1	99	55.817	Cercocebus_atys
ENSSPUG00000012447	URB1	99	54.395	ENSCLAG00000005262	URB1	99	54.395	Chinchilla_lanigera
ENSSPUG00000012447	URB1	99	54.748	ENSCSAG00000009584	URB1	99	54.656	Chlorocebus_sabaeus
ENSSPUG00000012447	URB1	99	75.480	ENSCPBG00000006454	URB1	99	75.480	Chrysemys_picta_bellii
ENSSPUG00000012447	URB1	99	55.389	ENSCANG00000031088	URB1	99	55.338	Colobus_angolensis_palliatus
ENSSPUG00000012447	URB1	98	54.369	ENSCGRG00001010616	Urb1	99	53.957	Cricetulus_griseus_chok1gshd
ENSSPUG00000012447	URB1	98	54.736	ENSCGRG00000015840	Urb1	99	54.736	Cricetulus_griseus_crigri
ENSSPUG00000012447	URB1	99	43.531	ENSCSEG00000012616	urb1	99	43.315	Cynoglossus_semilaevis
ENSSPUG00000012447	URB1	89	56.723	ENSCVAG00000009076	urb1	99	55.000	Cyprinodon_variegatus
ENSSPUG00000012447	URB1	99	45.793	ENSDARG00000060308	urb1	99	45.628	Danio_rerio
ENSSPUG00000012447	URB1	85	59.179	ENSDNOG00000015586	URB1	99	58.884	Dasypus_novemcinctus
ENSSPUG00000012447	URB1	99	54.121	ENSDORG00000006735	Urb1	99	54.185	Dipodomys_ordii
ENSSPUG00000012447	URB1	91	61.331	ENSETEG00000009080	URB1	92	61.331	Echinops_telfairi
ENSSPUG00000012447	URB1	100	54.870	ENSEASG00005007711	URB1	99	55.793	Equus_asinus_asinus
ENSSPUG00000012447	URB1	96	65.955	ENSECAG00000013206	URB1	99	65.955	Equus_caballus
ENSSPUG00000012447	URB1	54	63.961	ENSEEUG00000003626	-	53	63.636	Erinaceus_europaeus
ENSSPUG00000012447	URB1	100	44.931	ENSELUG00000020516	urb1	99	45.182	Esox_lucius
ENSSPUG00000012447	URB1	99	55.135	ENSFCAG00000002177	URB1	99	54.889	Felis_catus
ENSSPUG00000012447	URB1	98	58.547	ENSFALG00000004636	URB1	99	58.488	Ficedula_albicollis
ENSSPUG00000012447	URB1	98	54.301	ENSFDAG00000007288	URB1	95	53.846	Fukomys_damarensis
ENSSPUG00000012447	URB1	99	42.346	ENSFHEG00000000202	urb1	99	43.216	Fundulus_heteroclitus
ENSSPUG00000012447	URB1	93	47.804	ENSGMOG00000001838	urb1	94	47.890	Gadus_morhua
ENSSPUG00000012447	URB1	99	67.409	ENSGALG00000015887	URB1	99	67.409	Gallus_gallus
ENSSPUG00000012447	URB1	94	52.984	ENSGAFG00000020694	urb1	98	52.984	Gambusia_affinis
ENSSPUG00000012447	URB1	98	46.127	ENSGACG00000011703	urb1	99	46.127	Gasterosteus_aculeatus
ENSSPUG00000012447	URB1	99	74.880	ENSGAGG00000022544	URB1	99	74.793	Gopherus_agassizii
ENSSPUG00000012447	URB1	99	55.231	ENSGGOG00000000285	URB1	99	55.009	Gorilla_gorilla
ENSSPUG00000012447	URB1	99	46.265	ENSHBUG00000001904	urb1	99	46.027	Haplochromis_burtoni
ENSSPUG00000012447	URB1	99	53.219	ENSHGLG00000004907	URB1	99	53.262	Heterocephalus_glaber_female
ENSSPUG00000012447	URB1	99	53.652	ENSHGLG00100010749	URB1	99	53.696	Heterocephalus_glaber_male
ENSSPUG00000012447	URB1	71	56.180	ENSHCOG00000018683	urb1	98	56.180	Hippocampus_comes
ENSSPUG00000012447	URB1	99	41.104	ENSIPUG00000014721	urb1	99	41.182	Ictalurus_punctatus
ENSSPUG00000012447	URB1	98	55.015	ENSSTOG00000004539	URB1	99	54.462	Ictidomys_tridecemlineatus
ENSSPUG00000012447	URB1	96	48.240	ENSKMAG00000006001	urb1	99	49.200	Kryptolebias_marmoratus
ENSSPUG00000012447	URB1	97	43.500	ENSLBEG00000027208	urb1	99	43.500	Labrus_bergylta
ENSSPUG00000012447	URB1	99	52.876	ENSLACG00000017059	URB1	100	52.833	Latimeria_chalumnae
ENSSPUG00000012447	URB1	99	48.443	ENSLOCG00000009190	urb1	99	48.484	Lepisosteus_oculatus
ENSSPUG00000012447	URB1	99	55.939	ENSLAFG00000010407	URB1	99	55.895	Loxodonta_africana
ENSSPUG00000012447	URB1	99	56.044	ENSMFAG00000034391	URB1	96	55.986	Macaca_fascicularis
ENSSPUG00000012447	URB1	99	55.824	ENSMMUG00000010295	URB1	99	55.768	Macaca_mulatta
ENSSPUG00000012447	URB1	99	55.099	ENSMNEG00000032981	URB1	99	54.878	Macaca_nemestrina
ENSSPUG00000012447	URB1	99	56.049	ENSMLEG00000041435	URB1	99	56.035	Mandrillus_leucophaeus
ENSSPUG00000012447	URB1	99	44.056	ENSMAMG00000011238	urb1	99	43.857	Mastacembelus_armatus
ENSSPUG00000012447	URB1	99	41.667	ENSMZEG00005011862	urb1	99	41.483	Maylandia_zebra
ENSSPUG00000012447	URB1	98	68.139	ENSMGAG00000014512	URB1	99	68.170	Meleagris_gallopavo
ENSSPUG00000012447	URB1	91	60.954	ENSMAUG00000010516	Urb1	99	60.000	Mesocricetus_auratus
ENSSPUG00000012447	URB1	100	54.957	ENSMICG00000016424	URB1	99	54.957	Microcebus_murinus
ENSSPUG00000012447	URB1	99	52.719	ENSMOCG00000012613	Urb1	99	52.719	Microtus_ochrogaster
ENSSPUG00000012447	URB1	99	57.529	ENSMODG00000021076	URB1	99	57.486	Monodelphis_domestica
ENSSPUG00000012447	URB1	97	54.214	ENSMALG00000017411	urb1	99	54.214	Monopterus_albus
ENSSPUG00000012447	URB1	99	53.154	MGP_CAROLIEiJ_G0020948	Urb1	99	53.154	Mus_caroli
ENSSPUG00000012447	URB1	99	53.267	ENSMUSG00000039929	Urb1	99	53.267	Mus_musculus
ENSSPUG00000012447	URB1	99	52.939	MGP_PahariEiJ_G0016653	Urb1	99	52.939	Mus_pahari
ENSSPUG00000012447	URB1	99	52.875	MGP_SPRETEiJ_G0021854	Urb1	99	52.875	Mus_spretus
ENSSPUG00000012447	URB1	99	55.251	ENSMPUG00000001123	URB1	99	55.255	Mustela_putorius_furo
ENSSPUG00000012447	URB1	99	53.374	ENSNGAG00000001905	Urb1	99	53.151	Nannospalax_galili
ENSSPUG00000012447	URB1	83	48.019	ENSNBRG00000001049	urb1	99	48.019	Neolamprologus_brichardi
ENSSPUG00000012447	URB1	99	54.125	ENSNLEG00000026872	URB1	99	54.252	Nomascus_leucogenys
ENSSPUG00000012447	URB1	91	70.690	ENSMEUG00000010828	URB1	94	61.070	Notamacropus_eugenii
ENSSPUG00000012447	URB1	99	52.070	ENSOPRG00000013482	URB1	99	52.049	Ochotona_princeps
ENSSPUG00000012447	URB1	99	53.789	ENSODEG00000002587	URB1	99	53.746	Octodon_degus
ENSSPUG00000012447	URB1	99	46.418	ENSONIG00000005599	urb1	99	46.244	Oreochromis_niloticus
ENSSPUG00000012447	URB1	99	55.061	ENSOCUG00000009381	URB1	99	54.771	Oryctolagus_cuniculus
ENSSPUG00000012447	URB1	99	45.009	ENSORLG00000003429	urb1	99	45.009	Oryzias_latipes
ENSSPUG00000012447	URB1	99	44.775	ENSORLG00020013785	urb1	99	44.775	Oryzias_latipes_hni
ENSSPUG00000012447	URB1	96	56.354	ENSORLG00015019421	urb1	99	56.354	Oryzias_latipes_hsok
ENSSPUG00000012447	URB1	73	58.400	ENSOMEG00000002094	urb1	97	58.400	Oryzias_melastigma
ENSSPUG00000012447	URB1	99	55.580	ENSOGAG00000017140	URB1	99	55.599	Otolemur_garnettii
ENSSPUG00000012447	URB1	98	49.172	ENSOARG00000013679	URB1	99	48.585	Ovis_aries
ENSSPUG00000012447	URB1	99	55.366	ENSPPAG00000003423	URB1	99	55.183	Pan_paniscus
ENSSPUG00000012447	URB1	99	55.721	ENSPPRG00000023131	URB1	99	55.429	Panthera_pardus
ENSSPUG00000012447	URB1	91	56.290	ENSPTIG00000016125	URB1	96	56.543	Panthera_tigris_altaica
ENSSPUG00000012447	URB1	99	55.279	ENSPTRG00000013852	URB1	99	55.096	Pan_troglodytes
ENSSPUG00000012447	URB1	99	56.005	ENSPANG00000021964	URB1	99	55.948	Papio_anubis
ENSSPUG00000012447	URB1	99	46.591	ENSPKIG00000003683	urb1	99	46.588	Paramormyrops_kingsleyae
ENSSPUG00000012447	URB1	99	53.742	ENSPEMG00000021205	Urb1	99	53.742	Peromyscus_maniculatus_bairdii
ENSSPUG00000012447	URB1	76	33.333	ENSPMAG00000009733	URB1	99	33.388	Petromyzon_marinus
ENSSPUG00000012447	URB1	99	57.904	ENSPCIG00000016350	URB1	99	58.446	Phascolarctos_cinereus
ENSSPUG00000012447	URB1	96	43.308	ENSPLAG00000004371	urb1	99	43.192	Poecilia_latipinna
ENSSPUG00000012447	URB1	99	43.766	ENSPMEG00000006634	urb1	99	43.723	Poecilia_mexicana
ENSSPUG00000012447	URB1	99	43.840	ENSPREG00000013453	urb1	99	43.810	Poecilia_reticulata
ENSSPUG00000012447	URB1	99	55.197	ENSPPYG00000011359	URB1	99	55.216	Pongo_abelii
ENSSPUG00000012447	URB1	99	48.298	ENSPCAG00000007430	URB1	99	47.953	Procavia_capensis
ENSSPUG00000012447	URB1	99	55.444	ENSPCOG00000022695	URB1	99	55.174	Propithecus_coquereli
ENSSPUG00000012447	URB1	99	53.910	ENSPVAG00000000889	URB1	99	53.954	Pteropus_vampyrus
ENSSPUG00000012447	URB1	99	45.130	ENSPNYG00000010589	urb1	99	44.991	Pundamilia_nyererei
ENSSPUG00000012447	URB1	99	41.255	ENSPNAG00000019324	urb1	99	41.522	Pygocentrus_nattereri
ENSSPUG00000012447	URB1	99	52.931	ENSRNOG00000002080	Urb1	99	52.974	Rattus_norvegicus
ENSSPUG00000012447	URB1	99	55.389	ENSRBIG00000033122	URB1	99	55.377	Rhinopithecus_bieti
ENSSPUG00000012447	URB1	99	55.477	ENSRROG00000040237	URB1	99	55.464	Rhinopithecus_roxellana
ENSSPUG00000012447	URB1	99	55.754	ENSSBOG00000027672	URB1	99	55.754	Saimiri_boliviensis_boliviensis
ENSSPUG00000012447	URB1	99	58.090	ENSSHAG00000005140	URB1	100	58.046	Sarcophilus_harrisii
ENSSPUG00000012447	URB1	91	48.551	ENSSFOG00015000339	urb1	98	48.504	Scleropages_formosus
ENSSPUG00000012447	URB1	99	46.107	ENSSMAG00000003782	urb1	99	46.061	Scophthalmus_maximus
ENSSPUG00000012447	URB1	99	46.244	ENSSDUG00000012313	urb1	99	46.221	Seriola_dumerili
ENSSPUG00000012447	URB1	99	46.030	ENSSLDG00000023179	urb1	99	45.964	Seriola_lalandi_dorsalis
ENSSPUG00000012447	URB1	99	45.186	ENSSPAG00000006325	urb1	99	45.143	Stegastes_partitus
ENSSPUG00000012447	URB1	99	53.490	ENSSSCG00000032024	URB1	99	53.360	Sus_scrofa
ENSSPUG00000012447	URB1	73	66.726	ENSTGUG00000013442	URB1	100	66.726	Taeniopygia_guttata
ENSSPUG00000012447	URB1	99	44.478	ENSTRUG00000009372	urb1	99	44.367	Takifugu_rubripes
ENSSPUG00000012447	URB1	98	43.846	ENSTNIG00000016277	urb1	99	43.758	Tetraodon_nigroviridis
ENSSPUG00000012447	URB1	78	55.814	ENSTBEG00000010044	URB1	79	55.814	Tupaia_belangeri
ENSSPUG00000012447	URB1	90	60.309	ENSTTRG00000007712	URB1	92	60.412	Tursiops_truncatus
ENSSPUG00000012447	URB1	99	55.381	ENSUAMG00000012231	URB1	99	55.317	Ursus_americanus
ENSSPUG00000012447	URB1	91	56.517	ENSUMAG00000017419	URB1	98	56.339	Ursus_maritimus
ENSSPUG00000012447	URB1	69	70.548	ENSVPAG00000001164	URB1	68	70.548	Vicugna_pacos
ENSSPUG00000012447	URB1	99	55.808	ENSVVUG00000000551	URB1	99	55.677	Vulpes_vulpes
ENSSPUG00000012447	URB1	99	55.589	ENSXETG00000009895	urb1	99	55.565	Xenopus_tropicalis
ENSSPUG00000012447	URB1	99	42.238	ENSXCOG00000005500	urb1	97	46.595	Xiphophorus_couchianus
ENSSPUG00000012447	URB1	99	42.630	ENSXMAG00000007253	urb1	97	47.005	Xiphophorus_maculatus