EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000012485 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 787 bases
Position: chrQEPC01006279.1:271924-272710
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000016140	RNase_T	PF00929.24	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000017204	-	711	-	ENSSPUP00000016140	236 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000012485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000012485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000012485	-	100	100.000	ENSSPUG00000012477	-	100	100.000
ENSSPUG00000012485	-	88	65.741	ENSSPUG00000015575	-	92	65.741
ENSSPUG00000012485	-	100	100.000	ENSSPUG00000012467	-	100	100.000
ENSSPUG00000012485	-	94	100.000	ENSSPUG00000012496	-	92	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000012485	-	94	57.447	ENSAMEG00000008933	TREX2	81	57.895	Ailuropoda_melanoleuca
ENSSPUG00000012485	-	92	42.174	ENSACAG00000008936	TREX1	95	42.105	Anolis_carolinensis
ENSSPUG00000012485	-	90	60.000	ENSACAG00000012912	TREX2	92	60.377	Anolis_carolinensis
ENSSPUG00000012485	-	92	57.895	ENSCAFG00000019185	TREX2	81	57.895	Canis_familiaris
ENSSPUG00000012485	-	91	57.709	ENSCAFG00020023190	TREX2	72	57.709	Canis_lupus_dingo
ENSSPUG00000012485	-	94	54.043	ENSCAPG00000004768	TREX2	85	54.626	Cavia_aperea
ENSSPUG00000012485	-	94	53.617	ENSCPOG00000025702	TREX2	96	54.185	Cavia_porcellus
ENSSPUG00000012485	-	92	54.348	ENSCLAG00000002698	TREX2	94	55.405	Chinchilla_lanigera
ENSSPUG00000012485	-	89	58.491	ENSCPBG00000008273	TREX2	79	58.491	Chrysemys_picta_bellii
ENSSPUG00000012485	-	92	54.185	ENSCGRG00001012110	Trex2	96	54.185	Cricetulus_griseus_chok1gshd
ENSSPUG00000012485	-	90	41.704	ENSDORG00000016464	Trex1	73	41.704	Dipodomys_ordii
ENSSPUG00000012485	-	86	46.296	ENSEBUG00000006412	TREX1	84	46.296	Eptatretus_burgeri
ENSSPUG00000012485	-	92	55.263	ENSEASG00005019558	TREX2	82	55.263	Equus_asinus_asinus
ENSSPUG00000012485	-	92	55.263	ENSECAG00000016012	TREX2	82	55.263	Equus_caballus
ENSSPUG00000012485	-	92	57.709	ENSFCAG00000018938	TREX2	96	57.709	Felis_catus
ENSSPUG00000012485	-	92	55.066	ENSFDAG00000014463	TREX2	96	55.066	Fukomys_damarensis
ENSSPUG00000012485	-	92	54.185	ENSHGLG00000008010	TREX2	96	54.185	Heterocephalus_glaber_female
ENSSPUG00000012485	-	92	54.185	ENSHGLG00100011918	TREX2	96	54.185	Heterocephalus_glaber_male
ENSSPUG00000012485	-	89	55.708	ENSSTOG00000027213	TREX2	92	55.708	Ictidomys_tridecemlineatus
ENSSPUG00000012485	-	92	55.947	ENSJJAG00000012484	Trex2	96	55.947	Jaculus_jaculus
ENSSPUG00000012485	-	93	48.416	ENSLACG00000000797	-	90	48.182	Latimeria_chalumnae
ENSSPUG00000012485	-	92	53.304	ENSMOCG00000001305	Trex2	96	53.304	Microtus_ochrogaster
ENSSPUG00000012485	-	95	52.521	ENSMODG00000025322	-	94	53.070	Monodelphis_domestica
ENSSPUG00000012485	-	95	52.941	ENSMODG00000022848	-	94	53.509	Monodelphis_domestica
ENSSPUG00000012485	-	92	55.066	MGP_CAROLIEiJ_G0033149	Trex2	96	55.066	Mus_caroli
ENSSPUG00000012485	-	92	55.947	ENSMUSG00000031372	Trex2	96	55.947	Mus_musculus
ENSSPUG00000012485	-	93	55.365	MGP_PahariEiJ_G0031692	Trex2	98	55.365	Mus_pahari
ENSSPUG00000012485	-	92	55.947	MGP_SPRETEiJ_G0034304	Trex2	96	55.947	Mus_spretus
ENSSPUG00000012485	-	92	56.140	ENSMPUG00000019552	TREX2	96	56.140	Mustela_putorius_furo
ENSSPUG00000012485	-	93	55.556	ENSMLUG00000027143	TREX2	98	55.556	Myotis_lucifugus
ENSSPUG00000012485	-	88	52.968	ENSMEUG00000016646	TREX2	96	52.968	Notamacropus_eugenii
ENSSPUG00000012485	-	94	55.319	ENSODEG00000019142	TREX2	88	55.947	Octodon_degus
ENSSPUG00000012485	-	92	56.828	ENSOANG00000000686	TREX2	95	56.951	Ornithorhynchus_anatinus
ENSSPUG00000012485	-	80	30.102	ENSORLG00015015303	si:ch1073-296i8.2	79	30.256	Oryzias_latipes_hsok
ENSSPUG00000012485	-	91	53.540	ENSOGAG00000033175	TREX2	86	54.338	Otolemur_garnettii
ENSSPUG00000012485	-	92	57.269	ENSPPRG00000017457	TREX2	96	57.269	Panthera_pardus
ENSSPUG00000012485	-	85	56.931	ENSPSIG00000006116	TREX2	87	56.931	Pelodiscus_sinensis
ENSSPUG00000012485	-	94	53.419	ENSPEMG00000004918	Trex2	96	54.185	Peromyscus_maniculatus_bairdii
ENSSPUG00000012485	-	88	54.338	ENSPCIG00000009700	TREX2	92	54.338	Phascolarctos_cinereus
ENSSPUG00000012485	-	92	54.386	ENSPCAG00000005411	TREX2	87	54.386	Procavia_capensis
ENSSPUG00000012485	-	92	55.702	ENSPVAG00000001122	TREX2	82	55.702	Pteropus_vampyrus
ENSSPUG00000012485	-	89	54.795	ENSRNOG00000056983	Trex2	92	54.795	Rattus_norvegicus
ENSSPUG00000012485	-	93	52.381	ENSSHAG00000004059	TREX2	91	54.091	Sarcophilus_harrisii
ENSSPUG00000012485	-	92	57.456	ENSUAMG00000027544	TREX2	84	57.456	Ursus_americanus
ENSSPUG00000012485	-	92	57.895	ENSVVUG00000029714	TREX2	85	57.895	Vulpes_vulpes