EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000012525 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 43015 bases
Position: chrQEPC01009046.1:3146600-3189614
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000016209	DND1_DSRM	PF14709.7	1.2e-26	1	1
ENSSPUP00000016209	RRM_1	PF00076.22	2.6e-35	1	3
ENSSPUP00000016209	RRM_1	PF00076.22	2.6e-35	2	3
ENSSPUP00000016209	RRM_1	PF00076.22	2.6e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000017276	-	1611	-	ENSSPUP00000016209	536 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000012525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000012525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000012525	-	88	94.055	ENSSPUG00000004773	-	98	94.055
ENSSPUG00000012525	-	55	53.667	ENSSPUG00000010725	SYNCRIP	53	53.000
ENSSPUG00000012525	-	81	72.085	ENSSPUG00000006797	A1CF	84	72.085
ENSSPUG00000012525	-	58	71.154	ENSSPUG00000007515	RBM47	60	71.383

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000012525	-	100	91.418	ENSG00000151962	RBM46	100	96.241	Homo_sapiens
ENSSPUG00000012525	-	87	64.151	ENSAPOG00000009209	rbm46	92	64.226	Acanthochromis_polyacanthus
ENSSPUG00000012525	-	100	91.791	ENSAMEG00000013290	RBM46	100	91.791	Ailuropoda_melanoleuca
ENSSPUG00000012525	-	87	60.504	ENSACIG00000014500	rbm46	88	61.605	Amphilophus_citrinellus
ENSSPUG00000012525	-	94	61.660	ENSAOCG00000001892	-	98	61.660	Amphiprion_ocellaris
ENSSPUG00000012525	-	85	65.427	ENSAPEG00000017762	rbm46	99	65.427	Amphiprion_percula
ENSSPUG00000012525	-	97	60.653	ENSATEG00000010775	rbm46	97	60.845	Anabas_testudineus
ENSSPUG00000012525	-	87	88.437	ENSAPLG00000005116	RBM46	100	88.437	Anas_platyrhynchos
ENSSPUG00000012525	-	100	87.313	ENSACAG00000015599	RBM46	100	87.313	Anolis_carolinensis
ENSSPUG00000012525	-	100	90.672	ENSANAG00000029193	RBM46	99	93.148	Aotus_nancymaae
ENSSPUG00000012525	-	90	62.327	ENSACLG00000016153	rbm46	94	60.182	Astatotilapia_calliptera
ENSSPUG00000012525	-	84	66.962	ENSAMXG00000009397	rbm46	98	66.962	Astyanax_mexicanus
ENSSPUG00000012525	-	96	59.176	ENSAMXG00000020892	-	99	59.176	Astyanax_mexicanus
ENSSPUG00000012525	-	100	91.604	ENSBTAG00000001696	RBM46	100	91.604	Bos_taurus
ENSSPUG00000012525	-	100	89.366	ENSCJAG00000001768	RBM46	99	93.148	Callithrix_jacchus
ENSSPUG00000012525	-	100	91.604	ENSCAFG00000008473	RBM46	100	91.604	Canis_familiaris
ENSSPUG00000012525	-	100	91.604	ENSCAFG00020002468	RBM46	100	91.604	Canis_lupus_dingo
ENSSPUG00000012525	-	100	91.604	ENSCHIG00000000502	RBM46	100	91.604	Capra_hircus
ENSSPUG00000012525	-	87	93.576	ENSTSYG00000010435	RBM46	99	93.576	Carlito_syrichta
ENSSPUG00000012525	-	69	88.347	ENSCAPG00000011841	-	99	88.347	Cavia_aperea
ENSSPUG00000012525	-	89	90.871	ENSCAPG00000011928	-	99	90.871	Cavia_aperea
ENSSPUG00000012525	-	100	88.126	ENSCPOG00000019272	-	100	88.126	Cavia_porcellus
ENSSPUG00000012525	-	100	90.317	ENSCPOG00000010284	-	99	93.148	Cavia_porcellus
ENSSPUG00000012525	-	96	83.915	ENSCPOG00000020396	-	99	83.915	Cavia_porcellus
ENSSPUG00000012525	-	100	91.418	ENSCCAG00000027619	-	99	94.004	Cebus_capucinus
ENSSPUG00000012525	-	100	75.047	ENSCCAG00000001323	-	98	77.564	Cebus_capucinus
ENSSPUG00000012525	-	87	93.576	ENSCATG00000040148	RBM46	99	93.576	Cercocebus_atys
ENSSPUG00000012525	-	97	86.538	ENSCLAG00000011886	-	99	86.731	Chinchilla_lanigera
ENSSPUG00000012525	-	100	88.433	ENSCLAG00000005846	-	99	92.077	Chinchilla_lanigera
ENSSPUG00000012525	-	100	91.231	ENSCSAG00000003263	RBM46	100	91.231	Chlorocebus_sabaeus
ENSSPUG00000012525	-	100	90.485	ENSCHOG00000003429	RBM46	100	91.045	Choloepus_hoffmanni
ENSSPUG00000012525	-	83	94.607	ENSCPBG00000009314	RBM46	97	94.607	Chrysemys_picta_bellii
ENSSPUG00000012525	-	87	93.362	ENSCANG00000039065	RBM46	99	93.362	Colobus_angolensis_palliatus
ENSSPUG00000012525	-	100	92.351	ENSCGRG00001016714	Rbm46	99	94.433	Cricetulus_griseus_chok1gshd
ENSSPUG00000012525	-	100	92.351	ENSCGRG00000011738	Rbm46	99	94.433	Cricetulus_griseus_crigri
ENSSPUG00000012525	-	83	58.166	ENSCSEG00000005530	rbm46	96	58.166	Cynoglossus_semilaevis
ENSSPUG00000012525	-	88	61.814	ENSCVAG00000021013	rbm46	97	61.814	Cyprinodon_variegatus
ENSSPUG00000012525	-	97	63.585	ENSDARG00000079452	rbm46	99	63.585	Danio_rerio
ENSSPUG00000012525	-	100	91.791	ENSDNOG00000016195	RBM46	100	91.791	Dasypus_novemcinctus
ENSSPUG00000012525	-	100	91.418	ENSDORG00000006405	Rbm46	99	93.576	Dipodomys_ordii
ENSSPUG00000012525	-	100	88.993	ENSETEG00000014902	RBM46	100	88.993	Echinops_telfairi
ENSSPUG00000012525	-	100	91.418	ENSEASG00005015821	RBM46	100	91.418	Equus_asinus_asinus
ENSSPUG00000012525	-	89	91.286	ENSECAG00000007649	RBM46	99	91.286	Equus_caballus
ENSSPUG00000012525	-	100	87.687	ENSEEUG00000011824	RBM46	100	87.687	Erinaceus_europaeus
ENSSPUG00000012525	-	68	72.283	ENSELUG00000008166	rbm46	94	72.283	Esox_lucius
ENSSPUG00000012525	-	100	91.978	ENSFCAG00000029812	RBM46	99	94.218	Felis_catus
ENSSPUG00000012525	-	87	87.152	ENSFALG00000013157	RBM46	92	87.152	Ficedula_albicollis
ENSSPUG00000012525	-	100	87.313	ENSFDAG00000019281	-	100	87.313	Fukomys_damarensis
ENSSPUG00000012525	-	94	83.235	ENSFDAG00000006445	-	99	83.235	Fukomys_damarensis
ENSSPUG00000012525	-	74	63.198	ENSFHEG00000013257	rbm46	87	63.198	Fundulus_heteroclitus
ENSSPUG00000012525	-	87	80.728	ENSGALG00000009278	RBM46	99	80.728	Gallus_gallus
ENSSPUG00000012525	-	53	81.119	ENSGAFG00000020245	rbm46	89	80.836	Gambusia_affinis
ENSSPUG00000012525	-	95	88.008	ENSGAGG00000002019	RBM46	98	88.008	Gopherus_agassizii
ENSSPUG00000012525	-	100	91.791	ENSGGOG00000001876	RBM46	99	94.004	Gorilla_gorilla
ENSSPUG00000012525	-	83	62.780	ENSHBUG00000009609	rbm46	91	67.773	Haplochromis_burtoni
ENSSPUG00000012525	-	97	72.973	ENSHGLG00000010742	-	98	72.587	Heterocephalus_glaber_female
ENSSPUG00000012525	-	98	74.194	ENSHGLG00000002940	-	100	74.194	Heterocephalus_glaber_female
ENSSPUG00000012525	-	100	81.903	ENSHGLG00000002463	-	99	91.224	Heterocephalus_glaber_female
ENSSPUG00000012525	-	97	70.722	ENSHGLG00100018987	-	99	70.722	Heterocephalus_glaber_male
ENSSPUG00000012525	-	97	72.973	ENSHGLG00100004977	-	98	72.587	Heterocephalus_glaber_male
ENSSPUG00000012525	-	100	87.500	ENSHGLG00100012752	-	99	91.006	Heterocephalus_glaber_male
ENSSPUG00000012525	-	86	50.433	ENSHCOG00000012998	rbm46	92	50.433	Hippocampus_comes
ENSSPUG00000012525	-	99	62.929	ENSIPUG00000024038	rbm46	96	67.562	Ictalurus_punctatus
ENSSPUG00000012525	-	100	92.164	ENSSTOG00000007918	RBM46	99	94.218	Ictidomys_tridecemlineatus
ENSSPUG00000012525	-	87	93.362	ENSJJAG00000003902	Rbm46	99	93.362	Jaculus_jaculus
ENSSPUG00000012525	-	83	66.370	ENSKMAG00000015127	rbm46	96	60.496	Kryptolebias_marmoratus
ENSSPUG00000012525	-	100	85.634	ENSLACG00000002062	RBM46	100	85.634	Latimeria_chalumnae
ENSSPUG00000012525	-	99	69.663	ENSLOCG00000008298	rbm46	99	74.464	Lepisosteus_oculatus
ENSSPUG00000012525	-	87	94.647	ENSLAFG00000015448	RBM46	99	94.647	Loxodonta_africana
ENSSPUG00000012525	-	87	94.004	ENSMFAG00000043485	RBM46	99	94.004	Macaca_fascicularis
ENSSPUG00000012525	-	89	91.701	ENSMMUG00000021147	RBM46	99	91.701	Macaca_mulatta
ENSSPUG00000012525	-	87	94.004	ENSMNEG00000002787	RBM46	99	94.004	Macaca_nemestrina
ENSSPUG00000012525	-	87	93.362	ENSMLEG00000029756	RBM46	99	93.362	Mandrillus_leucophaeus
ENSSPUG00000012525	-	84	67.473	ENSMAMG00000009093	rbm46	99	61.303	Mastacembelus_armatus
ENSSPUG00000012525	-	88	63.768	ENSMZEG00005027849	rbm46	97	63.900	Maylandia_zebra
ENSSPUG00000012525	-	87	80.300	ENSMGAG00000001457	RBM46	99	80.300	Meleagris_gallopavo
ENSSPUG00000012525	-	100	92.164	ENSMAUG00000009911	Rbm46	99	94.218	Mesocricetus_auratus
ENSSPUG00000012525	-	100	91.791	ENSMICG00000042747	RBM46	99	93.790	Microcebus_murinus
ENSSPUG00000012525	-	100	92.164	ENSMOCG00000001188	Rbm46	99	94.218	Microtus_ochrogaster
ENSSPUG00000012525	-	84	63.020	ENSMMOG00000011214	rbm46	97	57.576	Mola_mola
ENSSPUG00000012525	-	100	85.788	ENSMODG00000001302	RBM46	100	85.788	Monodelphis_domestica
ENSSPUG00000012525	-	85	61.438	ENSMALG00000006185	rbm46	97	61.354	Monopterus_albus
ENSSPUG00000012525	-	100	92.164	MGP_CAROLIEiJ_G0025101	Rbm46	99	94.433	Mus_caroli
ENSSPUG00000012525	-	100	91.978	ENSMUSG00000033882	Rbm46	99	94.004	Mus_musculus
ENSSPUG00000012525	-	100	91.791	MGP_PahariEiJ_G0026544	Rbm46	99	94.218	Mus_pahari
ENSSPUG00000012525	-	100	91.791	MGP_SPRETEiJ_G0026043	Rbm46	99	93.790	Mus_spretus
ENSSPUG00000012525	-	89	91.909	ENSMPUG00000005670	RBM46	99	91.909	Mustela_putorius_furo
ENSSPUG00000012525	-	100	91.434	ENSMLUG00000003221	RBM46	100	91.434	Myotis_lucifugus
ENSSPUG00000012525	-	100	90.485	ENSNGAG00000004231	Rbm46	99	93.362	Nannospalax_galili
ENSSPUG00000012525	-	83	66.368	ENSNBRG00000000273	rbm46	84	66.368	Neolamprologus_brichardi
ENSSPUG00000012525	-	87	93.790	ENSNLEG00000006184	RBM46	99	93.790	Nomascus_leucogenys
ENSSPUG00000012525	-	78	94.952	ENSMEUG00000013328	RBM46	99	94.878	Notamacropus_eugenii
ENSSPUG00000012525	-	53	96.820	ENSOPRG00000007136	RBM46	100	96.820	Ochotona_princeps
ENSSPUG00000012525	-	100	87.500	ENSODEG00000000735	-	99	90.578	Octodon_degus
ENSSPUG00000012525	-	92	85.972	ENSODEG00000018002	-	97	85.972	Octodon_degus
ENSSPUG00000012525	-	86	65.948	ENSONIG00000014096	rbm46	99	65.948	Oreochromis_niloticus
ENSSPUG00000012525	-	88	87.447	ENSOANG00000002141	RBM46	97	87.104	Ornithorhynchus_anatinus
ENSSPUG00000012525	-	100	92.164	ENSOCUG00000017859	RBM46	100	92.164	Oryctolagus_cuniculus
ENSSPUG00000012525	-	87	61.017	ENSORLG00000002429	rbm46	97	56.434	Oryzias_latipes
ENSSPUG00000012525	-	87	61.734	ENSORLG00020022154	rbm46	97	56.514	Oryzias_latipes_hni
ENSSPUG00000012525	-	87	61.653	ENSORLG00015020234	rbm46	94	61.603	Oryzias_latipes_hsok
ENSSPUG00000012525	-	83	62.749	ENSOMEG00000022580	rbm46	99	57.736	Oryzias_melastigma
ENSSPUG00000012525	-	100	92.164	ENSOGAG00000005647	RBM46	100	92.164	Otolemur_garnettii
ENSSPUG00000012525	-	100	91.604	ENSOARG00000016406	RBM46	100	91.604	Ovis_aries
ENSSPUG00000012525	-	87	94.004	ENSPPAG00000043236	RBM46	99	94.004	Pan_paniscus
ENSSPUG00000012525	-	100	91.604	ENSPPRG00000009416	RBM46	99	94.004	Panthera_pardus
ENSSPUG00000012525	-	100	91.604	ENSPTIG00000017449	RBM46	99	94.004	Panthera_tigris_altaica
ENSSPUG00000012525	-	87	94.004	ENSPTRG00000016538	RBM46	99	94.004	Pan_troglodytes
ENSSPUG00000012525	-	100	91.791	ENSPANG00000004186	RBM46	99	94.004	Papio_anubis
ENSSPUG00000012525	-	98	67.366	ENSPKIG00000015334	rbm46	90	67.366	Paramormyrops_kingsleyae
ENSSPUG00000012525	-	87	94.647	ENSPSIG00000006429	RBM46	95	94.647	Pelodiscus_sinensis
ENSSPUG00000012525	-	86	82.772	ENSPMGG00000019872	rbm46	97	82.772	Periophthalmus_magnuspinnatus
ENSSPUG00000012525	-	100	92.351	ENSPEMG00000013899	Rbm46	99	94.433	Peromyscus_maniculatus_bairdii
ENSSPUG00000012525	-	100	93.097	ENSPCIG00000029626	RBM46	100	93.097	Phascolarctos_cinereus
ENSSPUG00000012525	-	74	79.863	ENSPFOG00000001079	rbm46	73	79.322	Poecilia_formosa
ENSSPUG00000012525	-	85	64.770	ENSPLAG00000004541	rbm46	94	58.333	Poecilia_latipinna
ENSSPUG00000012525	-	85	66.004	ENSPMEG00000015724	rbm46	92	66.004	Poecilia_mexicana
ENSSPUG00000012525	-	86	64.119	ENSPREG00000014464	rbm46	97	64.119	Poecilia_reticulata
ENSSPUG00000012525	-	100	91.231	ENSPPYG00000015144	RBM46	100	91.231	Pongo_abelii
ENSSPUG00000012525	-	99	84.486	ENSPCAG00000003110	RBM46	99	85.234	Procavia_capensis
ENSSPUG00000012525	-	100	90.858	ENSPCOG00000024347	RBM46	99	93.148	Propithecus_coquereli
ENSSPUG00000012525	-	100	92.537	ENSPVAG00000008376	RBM46	100	92.537	Pteropus_vampyrus
ENSSPUG00000012525	-	96	64.607	ENSPNAG00000025312	rbm46	99	64.366	Pygocentrus_nattereri
ENSSPUG00000012525	-	100	92.164	ENSRNOG00000025823	Rbm46	100	92.164	Rattus_norvegicus
ENSSPUG00000012525	-	87	93.576	ENSRBIG00000032583	RBM46	99	93.576	Rhinopithecus_bieti
ENSSPUG00000012525	-	87	93.362	ENSRROG00000044288	RBM46	99	93.362	Rhinopithecus_roxellana
ENSSPUG00000012525	-	100	91.045	ENSSBOG00000033028	RBM46	99	93.790	Saimiri_boliviensis_boliviensis
ENSSPUG00000012525	-	100	93.284	ENSSHAG00000012596	RBM46	100	93.284	Sarcophilus_harrisii
ENSSPUG00000012525	-	99	67.424	ENSSFOG00015000087	rbm46	98	66.856	Scleropages_formosus
ENSSPUG00000012525	-	86	62.338	ENSSMAG00000017042	rbm46	96	62.338	Scophthalmus_maximus
ENSSPUG00000012525	-	85	68.043	ENSSDUG00000020645	rbm46	89	67.896	Seriola_dumerili
ENSSPUG00000012525	-	100	91.418	ENSSARG00000006520	RBM46	100	91.418	Sorex_araneus
ENSSPUG00000012525	-	84	62.914	ENSSPAG00000013697	rbm46	94	62.914	Stegastes_partitus
ENSSPUG00000012525	-	87	94.218	ENSSSCG00000008994	RBM46	99	91.909	Sus_scrofa
ENSSPUG00000012525	-	87	85.011	ENSTGUG00000005307	RBM46	100	85.011	Taeniopygia_guttata
ENSSPUG00000012525	-	88	62.474	ENSTRUG00000004237	rbm46	95	62.474	Takifugu_rubripes
ENSSPUG00000012525	-	85	62.527	ENSTNIG00000008714	rbm46	98	57.486	Tetraodon_nigroviridis
ENSSPUG00000012525	-	100	88.619	ENSTBEG00000013949	RBM46	100	88.619	Tupaia_belangeri
ENSSPUG00000012525	-	100	90.485	ENSTTRG00000001239	RBM46	100	90.485	Tursiops_truncatus
ENSSPUG00000012525	-	100	91.791	ENSUAMG00000026593	RBM46	100	91.791	Ursus_americanus
ENSSPUG00000012525	-	100	91.604	ENSUMAG00000016442	RBM46	100	91.604	Ursus_maritimus
ENSSPUG00000012525	-	100	91.791	ENSVVUG00000024957	RBM46	99	94.218	Vulpes_vulpes
ENSSPUG00000012525	-	100	72.388	ENSXETG00000022412	-	99	72.388	Xenopus_tropicalis
ENSSPUG00000012525	-	100	54.713	ENSXETG00000032344	-	100	54.713	Xenopus_tropicalis
ENSSPUG00000012525	-	69	72.087	ENSXETG00000032067	-	100	71.545	Xenopus_tropicalis
ENSSPUG00000012525	-	83	64.579	ENSXMAG00000008237	rbm46	89	64.579	Xiphophorus_maculatus