EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000012805 (Gene tree)
Gene ID: -
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 130540 bases
Position: chrQEPC01011142.1:182072-312611
Accession: 13917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000016565	ResIII	PF04851.15	1.6e-07	1	1
ENSSPUP00000016565	DEAD	PF00270.29	6.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000017644	DDX39B-201	2210	-	ENSSPUP00000016565	428 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000012805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000012805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000012805	DDX39B	83	31.868	ENSSPUG00000015687	DDX27	54	32.418
ENSSPUG00000012805	DDX39B	67	30.034	ENSSPUG00000004555	-	56	30.034
ENSSPUG00000012805	DDX39B	90	33.592	ENSSPUG00000004404	DDX6	84	33.592
ENSSPUG00000012805	DDX39B	86	38.919	ENSSPUG00000014154	EIF4A2	90	38.919
ENSSPUG00000012805	DDX39B	77	35.758	ENSSPUG00000004958	DDX47	71	35.758
ENSSPUG00000012805	DDX39B	87	32.812	ENSSPUG00000001477	-	73	32.812
ENSSPUG00000012805	DDX39B	86	37.197	ENSSPUG00000018309	EIF4A1	92	37.297
ENSSPUG00000012805	DDX39B	89	31.458	ENSSPUG00000010688	DDX49	81	31.458
ENSSPUG00000012805	DDX39B	85	37.808	ENSSPUG00000013935	EIF4A3	89	37.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000012805	DDX39B	100	97.897	ENSG00000198563	DDX39B	100	97.897	Homo_sapiens
ENSSPUG00000012805	DDX39B	100	97.664	ENSAMEG00000009508	DDX39B	99	97.664	Ailuropoda_melanoleuca
ENSSPUG00000012805	DDX39B	99	93.208	ENSACIG00000004534	ddx39b	98	93.443	Amphilophus_citrinellus
ENSSPUG00000012805	DDX39B	100	92.130	ENSATEG00000012366	ddx39b	100	92.130	Anabas_testudineus
ENSSPUG00000012805	DDX39B	100	98.834	ENSACAG00000012240	DDX39B	100	98.834	Anolis_carolinensis
ENSSPUG00000012805	DDX39B	100	97.897	ENSANAG00000030372	DDX39B	100	97.897	Aotus_nancymaae
ENSSPUG00000012805	DDX39B	99	90.553	ENSACLG00000018759	ddx39b	99	91.014	Astatotilapia_calliptera
ENSSPUG00000012805	DDX39B	100	91.972	ENSAMXG00000017837	ddx39b	100	91.972	Astyanax_mexicanus
ENSSPUG00000012805	DDX39B	100	98.131	ENSBTAG00000014490	DDX39B	100	98.131	Bos_taurus
ENSSPUG00000012805	DDX39B	100	97.897	ENSCJAG00000003152	DDX39B	100	97.897	Callithrix_jacchus
ENSSPUG00000012805	DDX39B	100	97.664	ENSCAFG00000000509	DDX39B	100	99.355	Canis_familiaris
ENSSPUG00000012805	DDX39B	100	97.664	ENSCAFG00020020530	DDX39B	100	97.664	Canis_lupus_dingo
ENSSPUG00000012805	DDX39B	100	98.131	ENSCHIG00000004579	DDX39B	100	98.131	Capra_hircus
ENSSPUG00000012805	DDX39B	100	84.112	ENSTSYG00000029741	-	91	86.190	Carlito_syrichta
ENSSPUG00000012805	DDX39B	100	97.897	ENSTSYG00000010226	-	100	97.897	Carlito_syrichta
ENSSPUG00000012805	DDX39B	100	97.664	ENSCAPG00000010066	DDX39B	100	97.664	Cavia_aperea
ENSSPUG00000012805	DDX39B	100	97.664	ENSCPOG00000002335	DDX39B	100	97.664	Cavia_porcellus
ENSSPUG00000012805	DDX39B	100	97.897	ENSCCAG00000027897	DDX39B	100	97.897	Cebus_capucinus
ENSSPUG00000012805	DDX39B	99	88.235	ENSCATG00000043709	DDX39B	99	88.235	Cercocebus_atys
ENSSPUG00000012805	DDX39B	100	97.664	ENSCLAG00000014555	DDX39B	100	97.664	Chinchilla_lanigera
ENSSPUG00000012805	DDX39B	99	97.647	ENSCSAG00000008517	DDX39B	100	97.647	Chlorocebus_sabaeus
ENSSPUG00000012805	DDX39B	64	99.634	ENSCPBG00000014671	-	100	99.634	Chrysemys_picta_bellii
ENSSPUG00000012805	DDX39B	100	97.897	ENSCANG00000041217	DDX39B	100	97.897	Colobus_angolensis_palliatus
ENSSPUG00000012805	DDX39B	83	83.799	ENSCGRG00001021916	-	89	83.799	Cricetulus_griseus_chok1gshd
ENSSPUG00000012805	DDX39B	57	96.327	ENSCGRG00001017315	-	95	95.631	Cricetulus_griseus_chok1gshd
ENSSPUG00000012805	DDX39B	57	96.327	ENSCGRG00000012479	-	76	96.327	Cricetulus_griseus_crigri
ENSSPUG00000012805	DDX39B	100	92.414	ENSDARG00000036069	ddx39b	100	92.644	Danio_rerio
ENSSPUG00000012805	DDX39B	100	97.897	ENSDNOG00000010215	DDX39B	100	97.897	Dasypus_novemcinctus
ENSSPUG00000012805	DDX39B	87	97.594	ENSDORG00000004985	Ddx39b	100	97.594	Dipodomys_ordii
ENSSPUG00000012805	DDX39B	87	84.759	ENSETEG00000009649	DDX39B	87	84.759	Echinops_telfairi
ENSSPUG00000012805	DDX39B	100	97.897	ENSEASG00005017156	DDX39B	100	97.897	Equus_asinus_asinus
ENSSPUG00000012805	DDX39B	100	97.897	ENSECAG00000007750	DDX39B	100	97.897	Equus_caballus
ENSSPUG00000012805	DDX39B	100	92.593	ENSELUG00000017904	ddx39b	100	92.593	Esox_lucius
ENSSPUG00000012805	DDX39B	100	97.664	ENSFCAG00000004497	DDX39B	100	97.664	Felis_catus
ENSSPUG00000012805	DDX39B	100	97.664	ENSFDAG00000011074	DDX39B	100	97.664	Fukomys_damarensis
ENSSPUG00000012805	DDX39B	74	99.684	ENSGAGG00000001300	-	80	99.684	Gopherus_agassizii
ENSSPUG00000012805	DDX39B	100	97.897	ENSGGOG00000005989	DDX39B	100	97.897	Gorilla_gorilla
ENSSPUG00000012805	DDX39B	100	97.196	ENSHGLG00000019248	DDX39B	100	97.196	Heterocephalus_glaber_female
ENSSPUG00000012805	DDX39B	100	97.196	ENSHGLG00100011850	DDX39B	100	97.196	Heterocephalus_glaber_male
ENSSPUG00000012805	DDX39B	100	90.826	ENSIPUG00000015733	DDX39B	94	91.743	Ictalurus_punctatus
ENSSPUG00000012805	DDX39B	100	97.430	ENSSTOG00000012838	DDX39B	100	97.430	Ictidomys_tridecemlineatus
ENSSPUG00000012805	DDX39B	100	97.196	ENSJJAG00000005660	-	100	97.196	Jaculus_jaculus
ENSSPUG00000012805	DDX39B	99	78.014	ENSLBEG00000012254	ddx39b	99	78.220	Labrus_bergylta
ENSSPUG00000012805	DDX39B	66	79.078	ENSLBEG00000017177	-	81	79.078	Labrus_bergylta
ENSSPUG00000012805	DDX39B	100	89.401	ENSLACG00000002110	DDX39B	100	89.401	Latimeria_chalumnae
ENSSPUG00000012805	DDX39B	100	97.664	ENSLAFG00000014202	DDX39B	100	97.664	Loxodonta_africana
ENSSPUG00000012805	DDX39B	100	97.897	ENSMFAG00000034233	DDX39B	100	97.897	Macaca_fascicularis
ENSSPUG00000012805	DDX39B	100	97.897	ENSMMUG00000008839	DDX39B	100	97.897	Macaca_mulatta
ENSSPUG00000012805	DDX39B	100	97.897	ENSMNEG00000041059	DDX39B	100	97.897	Macaca_nemestrina
ENSSPUG00000012805	DDX39B	100	97.897	ENSMLEG00000043791	DDX39B	100	97.897	Mandrillus_leucophaeus
ENSSPUG00000012805	DDX39B	99	90.553	ENSMZEG00005017654	ddx39b	99	91.014	Maylandia_zebra
ENSSPUG00000012805	DDX39B	100	97.430	ENSMAUG00000008059	Ddx39b	100	97.430	Mesocricetus_auratus
ENSSPUG00000012805	DDX39B	100	97.897	ENSMICG00000017349	DDX39B	100	97.897	Microcebus_murinus
ENSSPUG00000012805	DDX39B	100	97.664	ENSMOCG00000011169	Ddx39b	100	97.664	Microtus_ochrogaster
ENSSPUG00000012805	DDX39B	88	97.613	ENSMODG00000015791	DDX39B	89	97.613	Monodelphis_domestica
ENSSPUG00000012805	DDX39B	100	97.664	ENSMUSG00000019432	Ddx39b	100	99.324	Mus_musculus
ENSSPUG00000012805	DDX39B	100	97.664	MGP_PahariEiJ_G0020513	Ddx39b	100	99.324	Mus_pahari
ENSSPUG00000012805	DDX39B	100	97.664	MGP_SPRETEiJ_G0022424	Ddx39b	100	97.664	Mus_spretus
ENSSPUG00000012805	DDX39B	100	97.664	ENSMPUG00000011407	DDX39B	100	97.664	Mustela_putorius_furo
ENSSPUG00000012805	DDX39B	73	99.357	ENSMLUG00000001681	DDX39B	100	99.357	Myotis_lucifugus
ENSSPUG00000012805	DDX39B	100	97.897	ENSNGAG00000022948	Ddx39b	100	97.897	Nannospalax_galili
ENSSPUG00000012805	DDX39B	100	73.832	ENSNLEG00000006094	DDX39B	100	73.832	Nomascus_leucogenys
ENSSPUG00000012805	DDX39B	86	99.550	ENSMEUG00000008264	DDX39B	86	99.550	Notamacropus_eugenii
ENSSPUG00000012805	DDX39B	100	97.664	ENSOPRG00000011923	DDX39B	100	97.664	Ochotona_princeps
ENSSPUG00000012805	DDX39B	100	97.897	ENSODEG00000018083	DDX39B	100	97.897	Octodon_degus
ENSSPUG00000012805	DDX39B	100	92.130	ENSONIG00000004740	ddx39b	100	92.130	Oreochromis_niloticus
ENSSPUG00000012805	DDX39B	55	95.781	ENSOANG00000008361	DDX39B	95	95.781	Ornithorhynchus_anatinus
ENSSPUG00000012805	DDX39B	100	94.131	ENSOCUG00000024126	DDX39B	100	94.131	Oryctolagus_cuniculus
ENSSPUG00000012805	DDX39B	100	96.503	ENSOGAG00000028850	-	100	96.503	Otolemur_garnettii
ENSSPUG00000012805	DDX39B	84	91.176	ENSOGAG00000009067	-	100	97.840	Otolemur_garnettii
ENSSPUG00000012805	DDX39B	100	98.131	ENSOARG00000008787	DDX39B	98	98.131	Ovis_aries
ENSSPUG00000012805	DDX39B	100	97.897	ENSPPAG00000043072	DDX39B	100	97.897	Pan_paniscus
ENSSPUG00000012805	DDX39B	100	97.664	ENSPPRG00000001913	DDX39B	100	97.664	Panthera_pardus
ENSSPUG00000012805	DDX39B	100	96.729	ENSPTIG00000017669	DDX39B	100	96.729	Panthera_tigris_altaica
ENSSPUG00000012805	DDX39B	100	97.897	ENSPTRG00000032509	DDX39B	100	97.897	Pan_troglodytes
ENSSPUG00000012805	DDX39B	100	97.897	ENSPANG00000018609	DDX39B	100	97.897	Papio_anubis
ENSSPUG00000012805	DDX39B	100	90.160	ENSPKIG00000011324	ddx39b	100	91.076	Paramormyrops_kingsleyae
ENSSPUG00000012805	DDX39B	100	97.430	ENSPEMG00000016905	Ddx39b	100	97.430	Peromyscus_maniculatus_bairdii
ENSSPUG00000012805	DDX39B	100	97.897	ENSPCIG00000017572	DDX39B	100	97.897	Phascolarctos_cinereus
ENSSPUG00000012805	DDX39B	100	97.897	ENSPPYG00000016433	DDX39B	100	97.897	Pongo_abelii
ENSSPUG00000012805	DDX39B	66	99.296	ENSPCAG00000003484	DDX39B	100	99.296	Procavia_capensis
ENSSPUG00000012805	DDX39B	100	97.897	ENSPCOG00000018656	DDX39B	100	97.897	Propithecus_coquereli
ENSSPUG00000012805	DDX39B	100	97.664	ENSPVAG00000004653	DDX39B	100	97.664	Pteropus_vampyrus
ENSSPUG00000012805	DDX39B	98	82.311	ENSPNYG00000010382	ddx39b	98	82.670	Pundamilia_nyererei
ENSSPUG00000012805	DDX39B	100	92.202	ENSPNAG00000026926	ddx39b	100	92.202	Pygocentrus_nattereri
ENSSPUG00000012805	DDX39B	100	97.664	ENSRNOG00000000841	Ddx39b	100	97.664	Rattus_norvegicus
ENSSPUG00000012805	DDX39B	100	87.617	ENSRBIG00000031309	DDX39B	100	87.617	Rhinopithecus_bieti
ENSSPUG00000012805	DDX39B	100	97.897	ENSRROG00000039517	DDX39B	100	97.897	Rhinopithecus_roxellana
ENSSPUG00000012805	DDX39B	100	87.617	ENSSBOG00000035513	-	100	87.617	Saimiri_boliviensis_boliviensis
ENSSPUG00000012805	DDX39B	100	97.897	ENSSHAG00000003209	DDX39B	100	97.897	Sarcophilus_harrisii
ENSSPUG00000012805	DDX39B	100	90.618	ENSSFOG00015016107	ddx39b	100	91.096	Scleropages_formosus
ENSSPUG00000012805	DDX39B	100	92.824	ENSSDUG00000011557	ddx39b	100	93.287	Seriola_dumerili
ENSSPUG00000012805	DDX39B	100	92.593	ENSSLDG00000015763	ddx39b	100	93.056	Seriola_lalandi_dorsalis
ENSSPUG00000012805	DDX39B	87	85.829	ENSSARG00000005245	DDX39B	100	85.829	Sorex_araneus
ENSSPUG00000012805	DDX39B	100	97.897	ENSSSCG00000001400	DDX39B	100	99.422	Sus_scrofa
ENSSPUG00000012805	DDX39B	100	75.000	ENSTBEG00000003721	DDX39B	100	75.000	Tupaia_belangeri
ENSSPUG00000012805	DDX39B	100	89.376	ENSTTRG00000014074	DDX39B	100	89.376	Tursiops_truncatus
ENSSPUG00000012805	DDX39B	100	84.884	ENSUAMG00000027335	DDX39B	100	84.884	Ursus_americanus
ENSSPUG00000012805	DDX39B	100	88.785	ENSUMAG00000015124	DDX39B	100	88.785	Ursus_maritimus
ENSSPUG00000012805	DDX39B	61	93.805	ENSVPAG00000009167	-	74	93.805	Vicugna_pacos
ENSSPUG00000012805	DDX39B	100	97.664	ENSVVUG00000019518	DDX39B	99	97.664	Vulpes_vulpes
ENSSPUG00000012805	DDX39B	100	84.419	ENSXETG00000002498	ddx39b	99	84.419	Xenopus_tropicalis