EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000012814 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 27639 bases
Position: chrQEPC01007437.1:610862-638500
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000016554	RtcB	PF01139.17	1.1e-143	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000017632	RTCB-201	2615	-	ENSSPUP00000016554	505 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000012814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000012814's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000012814	RTCB	100	96.238	ENSG00000100220	RTCB	100	96.238	Homo_sapiens
ENSSPUG00000012814	RTCB	100	93.267	ENSAPOG00000006040	rtcb	100	93.267	Acanthochromis_polyacanthus
ENSSPUG00000012814	RTCB	100	96.040	ENSAMEG00000016152	RTCB	100	96.040	Ailuropoda_melanoleuca
ENSSPUG00000012814	RTCB	100	88.713	ENSACIG00000009083	rtcb	100	88.713	Amphilophus_citrinellus
ENSSPUG00000012814	RTCB	100	93.465	ENSAOCG00000005662	rtcb	100	94.783	Amphiprion_ocellaris
ENSSPUG00000012814	RTCB	96	89.322	ENSAPEG00000024653	rtcb	100	89.322	Amphiprion_percula
ENSSPUG00000012814	RTCB	100	93.465	ENSAPEG00000024701	rtcb	100	93.465	Amphiprion_percula
ENSSPUG00000012814	RTCB	100	93.267	ENSATEG00000000618	rtcb	100	93.267	Anabas_testudineus
ENSSPUG00000012814	RTCB	100	94.220	ENSACAG00000014817	RTCB	100	94.220	Anolis_carolinensis
ENSSPUG00000012814	RTCB	72	94.444	ENSANAG00000023724	-	100	60.870	Aotus_nancymaae
ENSSPUG00000012814	RTCB	100	80.792	ENSANAG00000018191	-	91	80.792	Aotus_nancymaae
ENSSPUG00000012814	RTCB	100	92.277	ENSACLG00000008367	rtcb	100	93.478	Astatotilapia_calliptera
ENSSPUG00000012814	RTCB	100	93.861	ENSAMXG00000042320	rtcb	100	93.861	Astyanax_mexicanus
ENSSPUG00000012814	RTCB	100	96.238	ENSBTAG00000011070	RTCB	100	96.238	Bos_taurus
ENSSPUG00000012814	RTCB	100	72.871	WBGene00008877	rtcb-1	100	72.871	Caenorhabditis_elegans
ENSSPUG00000012814	RTCB	100	95.842	ENSCJAG00000006128	RTCB	100	95.842	Callithrix_jacchus
ENSSPUG00000012814	RTCB	100	91.881	ENSCAFG00000010789	-	100	91.881	Canis_familiaris
ENSSPUG00000012814	RTCB	100	96.040	ENSCAFG00000001785	RTCB	100	96.040	Canis_familiaris
ENSSPUG00000012814	RTCB	100	96.040	ENSCAFG00020004890	-	100	96.040	Canis_lupus_dingo
ENSSPUG00000012814	RTCB	87	92.273	ENSCAFG00020018953	-	99	92.273	Canis_lupus_dingo
ENSSPUG00000012814	RTCB	100	96.238	ENSCHIG00000027009	-	100	96.238	Capra_hircus
ENSSPUG00000012814	RTCB	100	95.842	ENSTSYG00000012320	RTCB	100	95.842	Carlito_syrichta
ENSSPUG00000012814	RTCB	94	96.835	ENSCAPG00000011647	RTCB	96	96.835	Cavia_aperea
ENSSPUG00000012814	RTCB	100	95.842	ENSCCAG00000000618	RTCB	100	95.842	Cebus_capucinus
ENSSPUG00000012814	RTCB	100	96.040	ENSCATG00000033424	RTCB	100	96.040	Cercocebus_atys
ENSSPUG00000012814	RTCB	100	96.436	ENSCLAG00000007997	RTCB	100	96.436	Chinchilla_lanigera
ENSSPUG00000012814	RTCB	100	95.842	ENSCSAG00000008351	RTCB	100	95.842	Chlorocebus_sabaeus
ENSSPUG00000012814	RTCB	100	82.376	ENSCHOG00000009123	RTCB	100	82.376	Choloepus_hoffmanni
ENSSPUG00000012814	RTCB	100	97.426	ENSCPBG00000023184	RTCB	100	97.426	Chrysemys_picta_bellii
ENSSPUG00000012814	RTCB	100	81.188	ENSCING00000003830	-	100	81.188	Ciona_intestinalis
ENSSPUG00000012814	RTCB	100	81.584	ENSCSAVG00000008124	-	100	80.638	Ciona_savignyi
ENSSPUG00000012814	RTCB	100	92.475	ENSCANG00000001891	RTCB	100	92.475	Colobus_angolensis_palliatus
ENSSPUG00000012814	RTCB	100	95.644	ENSCGRG00001011173	Rtcb	100	95.644	Cricetulus_griseus_chok1gshd
ENSSPUG00000012814	RTCB	96	94.274	ENSCGRG00000009587	-	100	94.274	Cricetulus_griseus_crigri
ENSSPUG00000012814	RTCB	100	93.267	ENSCSEG00000003986	rtcb	100	93.267	Cynoglossus_semilaevis
ENSSPUG00000012814	RTCB	82	92.308	ENSCVAG00000000569	rtcb	95	92.308	Cyprinodon_variegatus
ENSSPUG00000012814	RTCB	100	93.267	ENSDARG00000101047	rtcb	100	93.267	Danio_rerio
ENSSPUG00000012814	RTCB	80	93.120	ENSDNOG00000012425	RTCB	99	93.120	Dasypus_novemcinctus
ENSSPUG00000012814	RTCB	100	96.238	ENSDORG00000010855	Rtcb	100	96.238	Dipodomys_ordii
ENSSPUG00000012814	RTCB	99	84.891	FBgn0032781	RtcB	99	84.891	Drosophila_melanogaster
ENSSPUG00000012814	RTCB	100	89.505	ENSETEG00000001988	RTCB	100	89.505	Echinops_telfairi
ENSSPUG00000012814	RTCB	100	85.149	ENSEBUG00000014235	rtcb	100	85.149	Eptatretus_burgeri
ENSSPUG00000012814	RTCB	100	96.040	ENSEASG00005019059	RTCB	100	96.040	Equus_asinus_asinus
ENSSPUG00000012814	RTCB	100	96.040	ENSECAG00000023998	RTCB	100	96.040	Equus_caballus
ENSSPUG00000012814	RTCB	88	87.892	ENSEEUG00000006251	RTCB	99	87.892	Erinaceus_europaeus
ENSSPUG00000012814	RTCB	100	82.042	ENSELUG00000009275	rtcb	100	82.042	Esox_lucius
ENSSPUG00000012814	RTCB	100	96.238	ENSFCAG00000026480	RTCB	100	96.238	Felis_catus
ENSSPUG00000012814	RTCB	100	97.030	ENSFALG00000013334	RTCB	100	97.030	Ficedula_albicollis
ENSSPUG00000012814	RTCB	100	96.040	ENSFDAG00000018150	RTCB	100	96.040	Fukomys_damarensis
ENSSPUG00000012814	RTCB	100	93.861	ENSFHEG00000009595	rtcb	100	93.861	Fundulus_heteroclitus
ENSSPUG00000012814	RTCB	100	91.485	ENSGMOG00000018882	rtcb	100	91.485	Gadus_morhua
ENSSPUG00000012814	RTCB	100	97.822	ENSGALG00000012611	RTCB	100	97.822	Gallus_gallus
ENSSPUG00000012814	RTCB	100	93.465	ENSGAFG00000004198	rtcb	100	93.465	Gambusia_affinis
ENSSPUG00000012814	RTCB	100	92.277	ENSGACG00000000586	rtcb	100	92.277	Gasterosteus_aculeatus
ENSSPUG00000012814	RTCB	93	96.170	ENSGAGG00000019133	RTCB	98	96.170	Gopherus_agassizii
ENSSPUG00000012814	RTCB	100	96.238	ENSGGOG00000011402	RTCB	100	96.238	Gorilla_gorilla
ENSSPUG00000012814	RTCB	100	92.277	ENSHBUG00000020571	rtcb	100	92.277	Haplochromis_burtoni
ENSSPUG00000012814	RTCB	93	68.443	ENSHGLG00000001066	-	99	68.443	Heterocephalus_glaber_female
ENSSPUG00000012814	RTCB	100	96.040	ENSHGLG00000004492	RTCB	100	96.040	Heterocephalus_glaber_female
ENSSPUG00000012814	RTCB	100	96.040	ENSHGLG00100008965	RTCB	100	96.040	Heterocephalus_glaber_male
ENSSPUG00000012814	RTCB	100	90.927	ENSHCOG00000006450	rtcb	100	90.927	Hippocampus_comes
ENSSPUG00000012814	RTCB	100	93.267	ENSIPUG00000015443	rtcb	100	93.267	Ictalurus_punctatus
ENSSPUG00000012814	RTCB	100	96.238	ENSSTOG00000003878	RTCB	100	96.238	Ictidomys_tridecemlineatus
ENSSPUG00000012814	RTCB	100	95.842	ENSJJAG00000010667	Rtcb	100	95.842	Jaculus_jaculus
ENSSPUG00000012814	RTCB	100	93.267	ENSKMAG00000013178	rtcb	100	93.267	Kryptolebias_marmoratus
ENSSPUG00000012814	RTCB	100	92.871	ENSLBEG00000000214	rtcb	100	92.871	Labrus_bergylta
ENSSPUG00000012814	RTCB	100	93.861	ENSLBEG00000010566	RTCB	100	93.861	Labrus_bergylta
ENSSPUG00000012814	RTCB	100	95.248	ENSLACG00000013033	RTCB	100	95.248	Latimeria_chalumnae
ENSSPUG00000012814	RTCB	100	93.663	ENSLOCG00000016515	rtcb	99	93.663	Lepisosteus_oculatus
ENSSPUG00000012814	RTCB	100	95.248	ENSLAFG00000002082	RTCB	100	95.248	Loxodonta_africana
ENSSPUG00000012814	RTCB	100	95.842	ENSMFAG00000034419	RTCB	100	95.842	Macaca_fascicularis
ENSSPUG00000012814	RTCB	100	95.842	ENSMMUG00000006720	RTCB	100	95.842	Macaca_mulatta
ENSSPUG00000012814	RTCB	100	95.842	ENSMNEG00000040669	RTCB	100	95.842	Macaca_nemestrina
ENSSPUG00000012814	RTCB	100	96.040	ENSMLEG00000040505	RTCB	100	96.040	Mandrillus_leucophaeus
ENSSPUG00000012814	RTCB	100	93.465	ENSMAMG00000020676	rtcb	100	93.465	Mastacembelus_armatus
ENSSPUG00000012814	RTCB	100	92.277	ENSMZEG00005018942	rtcb	100	92.277	Maylandia_zebra
ENSSPUG00000012814	RTCB	100	97.436	ENSMGAG00000012805	RTCB	100	97.436	Meleagris_gallopavo
ENSSPUG00000012814	RTCB	60	98.230	ENSMAUG00000008301	Rtcb	100	98.230	Mesocricetus_auratus
ENSSPUG00000012814	RTCB	100	76.832	ENSMICG00000036677	-	100	76.832	Microcebus_murinus
ENSSPUG00000012814	RTCB	100	96.040	ENSMICG00000013303	-	100	96.040	Microcebus_murinus
ENSSPUG00000012814	RTCB	100	95.644	ENSMOCG00000002440	Rtcb	100	95.644	Microtus_ochrogaster
ENSSPUG00000012814	RTCB	100	93.069	ENSMMOG00000005987	rtcb	100	93.069	Mola_mola
ENSSPUG00000012814	RTCB	100	96.832	ENSMODG00000001414	RTCB	100	96.832	Monodelphis_domestica
ENSSPUG00000012814	RTCB	100	93.465	ENSMALG00000007603	rtcb	100	93.465	Monopterus_albus
ENSSPUG00000012814	RTCB	100	95.644	MGP_CAROLIEiJ_G0015689	Rtcb	100	95.644	Mus_caroli
ENSSPUG00000012814	RTCB	100	95.644	ENSMUSG00000001783	Rtcb	100	95.644	Mus_musculus
ENSSPUG00000012814	RTCB	100	95.644	MGP_PahariEiJ_G0031396	Rtcb	100	95.644	Mus_pahari
ENSSPUG00000012814	RTCB	100	95.644	MGP_SPRETEiJ_G0016507	Rtcb	100	95.644	Mus_spretus
ENSSPUG00000012814	RTCB	100	96.040	ENSMPUG00000012285	RTCB	100	96.040	Mustela_putorius_furo
ENSSPUG00000012814	RTCB	100	93.294	ENSMLUG00000007803	RTCB	100	93.294	Myotis_lucifugus
ENSSPUG00000012814	RTCB	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSSPUG00000012814	RTCB	100	92.475	ENSNBRG00000017202	rtcb	100	92.475	Neolamprologus_brichardi
ENSSPUG00000012814	RTCB	100	96.238	ENSNLEG00000004960	RTCB	100	96.238	Nomascus_leucogenys
ENSSPUG00000012814	RTCB	100	71.485	ENSMEUG00000007809	-	100	71.485	Notamacropus_eugenii
ENSSPUG00000012814	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSSPUG00000012814	RTCB	82	98.113	ENSODEG00000013033	-	100	98.113	Octodon_degus
ENSSPUG00000012814	RTCB	100	64.356	ENSODEG00000005042	-	100	64.356	Octodon_degus
ENSSPUG00000012814	RTCB	100	93.465	ENSONIG00000007474	rtcb	100	93.465	Oreochromis_niloticus
ENSSPUG00000012814	RTCB	100	96.436	ENSOANG00000005524	RTCB	100	96.436	Ornithorhynchus_anatinus
ENSSPUG00000012814	RTCB	93	95.957	ENSOCUG00000008270	RTCB	96	95.957	Oryctolagus_cuniculus
ENSSPUG00000012814	RTCB	100	92.871	ENSORLG00000020093	rtcb	100	92.871	Oryzias_latipes
ENSSPUG00000012814	RTCB	100	92.871	ENSORLG00020003706	rtcb	100	92.871	Oryzias_latipes_hni
ENSSPUG00000012814	RTCB	100	93.069	ENSORLG00015002968	rtcb	100	93.069	Oryzias_latipes_hsok
ENSSPUG00000012814	RTCB	100	92.673	ENSOMEG00000021278	rtcb	100	92.673	Oryzias_melastigma
ENSSPUG00000012814	RTCB	100	95.446	ENSOGAG00000001425	RTCB	100	95.446	Otolemur_garnettii
ENSSPUG00000012814	RTCB	100	96.238	ENSOARG00000018008	RTCB	100	96.238	Ovis_aries
ENSSPUG00000012814	RTCB	100	96.238	ENSPPAG00000028667	RTCB	100	96.238	Pan_paniscus
ENSSPUG00000012814	RTCB	100	96.238	ENSPPRG00000004038	RTCB	100	96.238	Panthera_pardus
ENSSPUG00000012814	RTCB	94	92.211	ENSPTIG00000020499	RTCB	97	93.263	Panthera_tigris_altaica
ENSSPUG00000012814	RTCB	100	96.238	ENSPTRG00000014287	RTCB	100	96.238	Pan_troglodytes
ENSSPUG00000012814	RTCB	100	95.842	ENSPANG00000016035	RTCB	100	95.842	Papio_anubis
ENSSPUG00000012814	RTCB	100	92.475	ENSPKIG00000001881	rtcb	100	92.475	Paramormyrops_kingsleyae
ENSSPUG00000012814	RTCB	91	97.826	ENSPSIG00000011690	RTCB	100	97.826	Pelodiscus_sinensis
ENSSPUG00000012814	RTCB	100	93.069	ENSPMGG00000016672	rtcb	100	93.069	Periophthalmus_magnuspinnatus
ENSSPUG00000012814	RTCB	100	95.644	ENSPEMG00000019548	Rtcb	100	95.644	Peromyscus_maniculatus_bairdii
ENSSPUG00000012814	RTCB	100	91.287	ENSPMAG00000005657	rtcb	100	91.287	Petromyzon_marinus
ENSSPUG00000012814	RTCB	100	96.436	ENSPCIG00000009467	RTCB	100	96.436	Phascolarctos_cinereus
ENSSPUG00000012814	RTCB	100	93.861	ENSPFOG00000003058	rtcb	100	93.861	Poecilia_formosa
ENSSPUG00000012814	RTCB	100	93.861	ENSPLAG00000017663	rtcb	100	93.861	Poecilia_latipinna
ENSSPUG00000012814	RTCB	100	93.861	ENSPMEG00000006227	rtcb	100	93.861	Poecilia_mexicana
ENSSPUG00000012814	RTCB	100	93.663	ENSPREG00000018467	rtcb	100	93.663	Poecilia_reticulata
ENSSPUG00000012814	RTCB	100	96.238	ENSPPYG00000011752	RTCB	100	96.238	Pongo_abelii
ENSSPUG00000012814	RTCB	93	78.178	ENSPCAG00000013641	RTCB	100	78.178	Procavia_capensis
ENSSPUG00000012814	RTCB	100	96.040	ENSPCOG00000017243	RTCB	100	96.040	Propithecus_coquereli
ENSSPUG00000012814	RTCB	93	95.532	ENSPVAG00000002380	RTCB	100	95.532	Pteropus_vampyrus
ENSSPUG00000012814	RTCB	100	92.277	ENSPNYG00000022760	rtcb	100	92.277	Pundamilia_nyererei
ENSSPUG00000012814	RTCB	100	93.267	ENSPNAG00000009209	rtcb	100	93.267	Pygocentrus_nattereri
ENSSPUG00000012814	RTCB	100	95.644	ENSRNOG00000004813	Rtcb	100	95.644	Rattus_norvegicus
ENSSPUG00000012814	RTCB	100	87.154	ENSRBIG00000042090	RTCB	100	87.154	Rhinopithecus_bieti
ENSSPUG00000012814	RTCB	100	91.089	ENSSBOG00000020085	-	100	91.089	Saimiri_boliviensis_boliviensis
ENSSPUG00000012814	RTCB	94	97.468	ENSSHAG00000016277	RTCB	100	97.468	Sarcophilus_harrisii
ENSSPUG00000012814	RTCB	100	92.277	ENSSFOG00015011572	RTCB	100	92.277	Scleropages_formosus
ENSSPUG00000012814	RTCB	100	92.079	ENSSFOG00015000763	rtcb	100	92.079	Scleropages_formosus
ENSSPUG00000012814	RTCB	100	89.901	ENSSMAG00000005096	rtcb	100	89.901	Scophthalmus_maximus
ENSSPUG00000012814	RTCB	100	92.871	ENSSDUG00000012605	rtcb	100	92.871	Seriola_dumerili
ENSSPUG00000012814	RTCB	100	92.871	ENSSLDG00000019458	rtcb	100	92.871	Seriola_lalandi_dorsalis
ENSSPUG00000012814	RTCB	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSSPUG00000012814	RTCB	100	93.465	ENSSPAG00000004623	rtcb	100	93.465	Stegastes_partitus
ENSSPUG00000012814	RTCB	100	96.238	ENSSSCG00000000158	RTCB	100	96.238	Sus_scrofa
ENSSPUG00000012814	RTCB	100	97.030	ENSTGUG00000010947	RTCB	99	97.030	Taeniopygia_guttata
ENSSPUG00000012814	RTCB	91	94.565	ENSTRUG00000009880	rtcb	100	94.565	Takifugu_rubripes
ENSSPUG00000012814	RTCB	100	91.881	ENSTNIG00000002484	rtcb	100	91.881	Tetraodon_nigroviridis
ENSSPUG00000012814	RTCB	100	82.970	ENSTBEG00000004418	RTCB	100	82.970	Tupaia_belangeri
ENSSPUG00000012814	RTCB	93	96.170	ENSTTRG00000006417	RTCB	100	96.170	Tursiops_truncatus
ENSSPUG00000012814	RTCB	100	96.040	ENSUAMG00000022792	RTCB	100	96.040	Ursus_americanus
ENSSPUG00000012814	RTCB	100	96.040	ENSUMAG00000017225	RTCB	100	96.040	Ursus_maritimus
ENSSPUG00000012814	RTCB	100	96.040	ENSVPAG00000005375	RTCB	100	96.040	Vicugna_pacos
ENSSPUG00000012814	RTCB	100	96.040	ENSVVUG00000023408	RTCB	100	97.297	Vulpes_vulpes
ENSSPUG00000012814	RTCB	100	94.653	ENSXETG00000011523	rtcb	100	94.653	Xenopus_tropicalis
ENSSPUG00000012814	RTCB	100	93.861	ENSXMAG00000002855	rtcb	100	93.861	Xiphophorus_maculatus