EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000012822 (Gene tree)
Gene ID: -
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 36497 bases
Position: chrQEPC01000564.1:877027-913523
Accession: 9758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000016571	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000017650	RAB1A-201	1434	-	ENSSPUP00000016571	205 (aa)	-	UPI00005E74B0

Gene Model

Click here to download ENSSPUG00000012822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000012822's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000012822	RAB1A	80	47.024	ENSSPUG00000005574	RAB33A	73	47.024
ENSSPUG00000012822	RAB1A	79	44.172	ENSSPUG00000010337	RAB42	76	44.172
ENSSPUG00000012822	RAB1A	80	49.697	ENSSPUG00000000617	RAB15	78	49.697
ENSSPUG00000012822	RAB1A	97	35.238	ENSSPUG00000015007	RAB29	99	35.238
ENSSPUG00000012822	RAB1A	52	32.075	ENSSPUG00000006583	DNAJC27	68	32.075
ENSSPUG00000012822	RAB1A	80	36.970	ENSSPUG00000003341	-	88	36.970
ENSSPUG00000012822	RAB1A	86	43.820	ENSSPUG00000000552	RAB39B	84	43.820
ENSSPUG00000012822	RAB1A	99	53.960	ENSSPUG00000016258	RAB35	100	53.960
ENSSPUG00000012822	RAB1A	80	37.576	ENSSPUG00000018789	-	95	35.912
ENSSPUG00000012822	RAB1A	60	38.400	ENSSPUG00000015409	RAB17	57	38.400
ENSSPUG00000012822	RAB1A	80	39.024	ENSSPUG00000008958	NRAS	86	39.024
ENSSPUG00000012822	RAB1A	94	38.889	ENSSPUG00000017301	RAB6A	93	38.889
ENSSPUG00000012822	RAB1A	83	58.960	ENSSPUG00000010896	-	100	53.171
ENSSPUG00000012822	RAB1A	57	31.092	ENSSPUG00000008413	ARL4A	59	31.092
ENSSPUG00000012822	RAB1A	79	50.617	ENSSPUG00000017677	-	93	44.845
ENSSPUG00000012822	RAB1A	79	42.236	ENSSPUG00000003439	RAB31	83	42.236
ENSSPUG00000012822	RAB1A	81	51.205	ENSSPUG00000006349	RAB30	82	51.205
ENSSPUG00000012822	RAB1A	90	48.649	ENSSPUG00000010112	RAB2B	90	47.959
ENSSPUG00000012822	RAB1A	66	30.435	ENSSPUG00000002363	-	68	30.435
ENSSPUG00000012822	RAB1A	80	48.466	ENSSPUG00000001173	RAB5A	84	48.466
ENSSPUG00000012822	RAB1A	75	34.641	ENSSPUG00000006274	RAB23	73	32.948
ENSSPUG00000012822	RAB1A	95	33.333	ENSSPUG00000013564	-	97	33.333
ENSSPUG00000012822	RAB1A	78	52.201	ENSSPUG00000013698	RAB11A	78	52.201
ENSSPUG00000012822	RAB1A	76	38.365	ENSSPUG00000003459	-	79	38.365
ENSSPUG00000012822	RAB1A	68	30.496	ENSSPUG00000011154	ARL3	66	30.496
ENSSPUG00000012822	RAB1A	84	37.288	ENSSPUG00000004262	RAB7A	86	37.288
ENSSPUG00000012822	RAB1A	57	32.500	ENSSPUG00000002850	-	61	32.500
ENSSPUG00000012822	RAB1A	97	39.706	ENSSPUG00000008120	RAB33B	85	40.299
ENSSPUG00000012822	RAB1A	57	33.613	ENSSPUG00000018772	ARL14	58	33.613
ENSSPUG00000012822	RAB1A	82	49.704	ENSSPUG00000003222	RAB12	77	46.032
ENSSPUG00000012822	RAB1A	80	35.928	ENSSPUG00000017750	MRAS	80	35.928
ENSSPUG00000012822	RAB1A	95	42.784	ENSSPUG00000014873	RAB5B	90	42.784
ENSSPUG00000012822	RAB1A	84	35.593	ENSSPUG00000005243	HRAS	93	35.593
ENSSPUG00000012822	RAB1A	99	94.059	ENSSPUG00000007945	RAB1B	100	94.059
ENSSPUG00000012822	RAB1A	95	38.144	ENSSPUG00000000017	RAB22A	97	38.144
ENSSPUG00000012822	RAB1A	94	35.096	ENSSPUG00000014551	RAB36	92	35.096
ENSSPUG00000012822	RAB1A	80	35.758	ENSSPUG00000007384	RAP2B	94	36.158
ENSSPUG00000012822	RAB1A	58	34.454	ENSSPUG00000007980	ARL8A	62	34.454
ENSSPUG00000012822	RAB1A	68	31.788	ENSSPUG00000018502	ARFRP1	73	31.788
ENSSPUG00000012822	RAB1A	85	51.149	ENSSPUG00000002243	-	80	51.149
ENSSPUG00000012822	RAB1A	73	31.333	ENSSPUG00000016774	RRAS2	88	32.099
ENSSPUG00000012822	RAB1A	91	45.455	ENSSPUG00000002526	-	86	45.455
ENSSPUG00000012822	RAB1A	100	42.326	ENSSPUG00000018803	RAB14	93	42.326
ENSSPUG00000012822	RAB1A	76	38.994	ENSSPUG00000017531	RAB9B	79	38.994
ENSSPUG00000012822	RAB1A	97	40.845	ENSSPUG00000002555	RAB25	99	41.294
ENSSPUG00000012822	RAB1A	95	43.814	ENSSPUG00000012950	-	89	43.814
ENSSPUG00000012822	RAB1A	95	36.683	ENSSPUG00000001533	-	91	36.683
ENSSPUG00000012822	RAB1A	75	34.395	ENSSPUG00000018361	RHEB	91	34.395

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000012822	RAB1A	100	99.512	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSSPUG00000012822	RAB1A	99	96.040	ENSAPOG00000008143	-	100	96.040	Acanthochromis_polyacanthus
ENSSPUG00000012822	RAB1A	100	99.512	ENSAMEG00000001127	RAB1A	100	99.512	Ailuropoda_melanoleuca
ENSSPUG00000012822	RAB1A	99	96.040	ENSAOCG00000020606	-	100	96.040	Amphiprion_ocellaris
ENSSPUG00000012822	RAB1A	99	96.040	ENSAPEG00000022488	-	100	96.040	Amphiprion_percula
ENSSPUG00000012822	RAB1A	100	99.512	ENSANAG00000020929	RAB1A	100	99.512	Aotus_nancymaae
ENSSPUG00000012822	RAB1A	99	96.535	ENSACLG00000003326	-	100	96.535	Astatotilapia_calliptera
ENSSPUG00000012822	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSSPUG00000012822	RAB1A	100	99.512	ENSBTAG00000016720	RAB1A	100	99.512	Bos_taurus
ENSSPUG00000012822	RAB1A	100	99.512	ENSCJAG00000046275	RAB1A	100	99.512	Callithrix_jacchus
ENSSPUG00000012822	RAB1A	100	99.512	ENSCAFG00000003187	RAB1A	100	99.512	Canis_familiaris
ENSSPUG00000012822	RAB1A	100	99.512	ENSCAFG00020026971	RAB1A	100	99.512	Canis_lupus_dingo
ENSSPUG00000012822	RAB1A	99	96.585	ENSCHIG00000014060	RAB1A	100	96.585	Capra_hircus
ENSSPUG00000012822	RAB1A	100	97.561	ENSTSYG00000005996	RAB1A	100	99.492	Carlito_syrichta
ENSSPUG00000012822	RAB1A	100	99.512	ENSCPOG00000015437	RAB1A	100	99.512	Cavia_porcellus
ENSSPUG00000012822	RAB1A	100	99.512	ENSCCAG00000021869	RAB1A	100	99.512	Cebus_capucinus
ENSSPUG00000012822	RAB1A	100	99.512	ENSCATG00000030853	RAB1A	100	99.512	Cercocebus_atys
ENSSPUG00000012822	RAB1A	100	99.512	ENSCLAG00000014766	RAB1A	100	99.512	Chinchilla_lanigera
ENSSPUG00000012822	RAB1A	100	100.000	ENSCPBG00000013243	RAB1A	100	100.000	Chrysemys_picta_bellii
ENSSPUG00000012822	RAB1A	100	97.073	ENSCANG00000035916	RAB1A	100	97.073	Colobus_angolensis_palliatus
ENSSPUG00000012822	RAB1A	100	99.512	ENSCGRG00001012691	-	100	99.512	Cricetulus_griseus_chok1gshd
ENSSPUG00000012822	RAB1A	100	99.512	ENSCGRG00000008456	-	100	99.512	Cricetulus_griseus_crigri
ENSSPUG00000012822	RAB1A	100	99.512	ENSDNOG00000018236	RAB1A	100	99.512	Dasypus_novemcinctus
ENSSPUG00000012822	RAB1A	100	99.512	ENSDORG00000028628	-	100	99.512	Dipodomys_ordii
ENSSPUG00000012822	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSSPUG00000012822	RAB1A	99	99.505	ENSETEG00000002205	RAB1A	100	99.505	Echinops_telfairi
ENSSPUG00000012822	RAB1A	100	99.512	ENSEASG00005007298	RAB1A	100	99.512	Equus_asinus_asinus
ENSSPUG00000012822	RAB1A	100	99.512	ENSECAG00000009926	RAB1A	100	99.512	Equus_caballus
ENSSPUG00000012822	RAB1A	99	99.505	ENSEEUG00000011721	RAB1A	100	99.505	Erinaceus_europaeus
ENSSPUG00000012822	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSSPUG00000012822	RAB1A	100	99.512	ENSFCAG00000002536	RAB1A	100	99.512	Felis_catus
ENSSPUG00000012822	RAB1A	99	98.030	ENSFALG00000013624	RAB1A	99	98.030	Ficedula_albicollis
ENSSPUG00000012822	RAB1A	100	99.512	ENSFDAG00000019505	-	100	99.512	Fukomys_damarensis
ENSSPUG00000012822	RAB1A	99	95.050	ENSFHEG00000014414	-	100	95.050	Fundulus_heteroclitus
ENSSPUG00000012822	RAB1A	100	100.000	ENSGALG00000031582	RAB1A	100	100.000	Gallus_gallus
ENSSPUG00000012822	RAB1A	99	95.050	ENSGAFG00000000918	-	100	95.050	Gambusia_affinis
ENSSPUG00000012822	RAB1A	100	100.000	ENSGAGG00000006802	RAB1A	100	100.000	Gopherus_agassizii
ENSSPUG00000012822	RAB1A	100	99.512	ENSGGOG00000026603	RAB1A	100	99.512	Gorilla_gorilla
ENSSPUG00000012822	RAB1A	100	99.512	ENSHGLG00000013585	RAB1A	100	99.512	Heterocephalus_glaber_female
ENSSPUG00000012822	RAB1A	99	97.059	ENSHGLG00100007994	RAB1A	99	97.059	Heterocephalus_glaber_male
ENSSPUG00000012822	RAB1A	100	99.512	ENSSTOG00000020693	-	100	99.512	Ictidomys_tridecemlineatus
ENSSPUG00000012822	RAB1A	96	99.492	ENSJJAG00000014396	Rab1a	100	99.492	Jaculus_jaculus
ENSSPUG00000012822	RAB1A	96	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSSPUG00000012822	RAB1A	99	95.545	ENSLBEG00000028426	RAB1A	100	95.545	Labrus_bergylta
ENSSPUG00000012822	RAB1A	100	98.049	ENSLACG00000012869	RAB1A	100	98.049	Latimeria_chalumnae
ENSSPUG00000012822	RAB1A	100	99.512	ENSLAFG00000016666	RAB1A	100	99.512	Loxodonta_africana
ENSSPUG00000012822	RAB1A	100	99.512	ENSMFAG00000046246	RAB1A	100	99.512	Macaca_fascicularis
ENSSPUG00000012822	RAB1A	96	99.492	ENSMMUG00000021721	RAB1A	91	99.492	Macaca_mulatta
ENSSPUG00000012822	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSSPUG00000012822	RAB1A	100	99.512	ENSMLEG00000042535	RAB1A	100	99.512	Mandrillus_leucophaeus
ENSSPUG00000012822	RAB1A	99	96.535	ENSMZEG00005013959	-	100	96.535	Maylandia_zebra
ENSSPUG00000012822	RAB1A	96	100.000	ENSMGAG00000004611	RAB1A	98	100.000	Meleagris_gallopavo
ENSSPUG00000012822	RAB1A	100	99.024	ENSMAUG00000012156	Rab1a	100	99.024	Mesocricetus_auratus
ENSSPUG00000012822	RAB1A	100	99.512	ENSMICG00000012587	RAB1A	100	99.512	Microcebus_murinus
ENSSPUG00000012822	RAB1A	100	99.024	ENSMOCG00000017022	Rab1a	100	99.024	Microtus_ochrogaster
ENSSPUG00000012822	RAB1A	99	94.059	ENSMMOG00000018709	RAB1A	100	94.059	Mola_mola
ENSSPUG00000012822	RAB1A	100	100.000	ENSMODG00000003340	RAB1A	100	100.000	Monodelphis_domestica
ENSSPUG00000012822	RAB1A	100	99.512	MGP_CAROLIEiJ_G0016115	Rab1a	100	99.512	Mus_caroli
ENSSPUG00000012822	RAB1A	100	99.512	ENSMUSG00000020149	Rab1a	100	99.512	Mus_musculus
ENSSPUG00000012822	RAB1A	100	99.512	MGP_PahariEiJ_G0016776	Rab1a	100	99.512	Mus_pahari
ENSSPUG00000012822	RAB1A	100	99.512	MGP_SPRETEiJ_G0016958	Rab1a	100	99.512	Mus_spretus
ENSSPUG00000012822	RAB1A	100	99.512	ENSMPUG00000006139	RAB1A	82	99.512	Mustela_putorius_furo
ENSSPUG00000012822	RAB1A	100	99.512	ENSMLUG00000009489	RAB1A	100	99.512	Myotis_lucifugus
ENSSPUG00000012822	RAB1A	100	99.512	ENSNGAG00000005838	Rab1a	100	99.512	Nannospalax_galili
ENSSPUG00000012822	RAB1A	99	96.535	ENSNBRG00000020492	-	100	96.535	Neolamprologus_brichardi
ENSSPUG00000012822	RAB1A	96	99.492	ENSOPRG00000006595	RAB1A	100	99.492	Ochotona_princeps
ENSSPUG00000012822	RAB1A	94	99.479	ENSODEG00000011248	-	96	99.479	Octodon_degus
ENSSPUG00000012822	RAB1A	99	94.118	ENSONIG00000006819	-	100	94.118	Oreochromis_niloticus
ENSSPUG00000012822	RAB1A	100	100.000	ENSOANG00000012438	RAB1A	100	100.000	Ornithorhynchus_anatinus
ENSSPUG00000012822	RAB1A	100	99.512	ENSOCUG00000017003	RAB1A	100	99.512	Oryctolagus_cuniculus
ENSSPUG00000012822	RAB1A	100	99.512	ENSOGAG00000026181	RAB1A	100	99.512	Otolemur_garnettii
ENSSPUG00000012822	RAB1A	96	99.492	ENSOARG00000019997	RAB1A	97	99.492	Ovis_aries
ENSSPUG00000012822	RAB1A	99	99.505	ENSPPAG00000030253	RAB1A	100	99.505	Pan_paniscus
ENSSPUG00000012822	RAB1A	100	99.512	ENSPPRG00000025077	RAB1A	100	99.512	Panthera_pardus
ENSSPUG00000012822	RAB1A	96	99.492	ENSPTIG00000013471	RAB1A	97	99.492	Panthera_tigris_altaica
ENSSPUG00000012822	RAB1A	100	99.512	ENSPTRG00000011989	RAB1A	100	99.512	Pan_troglodytes
ENSSPUG00000012822	RAB1A	100	99.512	ENSPANG00000010485	RAB1A	100	99.512	Papio_anubis
ENSSPUG00000012822	RAB1A	99	97.044	ENSPSIG00000008028	RAB1A	99	97.044	Pelodiscus_sinensis
ENSSPUG00000012822	RAB1A	99	96.078	ENSPMGG00000021015	-	99	96.078	Periophthalmus_magnuspinnatus
ENSSPUG00000012822	RAB1A	100	99.512	ENSPEMG00000009340	Rab1a	100	99.512	Peromyscus_maniculatus_bairdii
ENSSPUG00000012822	RAB1A	100	100.000	ENSPCIG00000023212	RAB1A	100	100.000	Phascolarctos_cinereus
ENSSPUG00000012822	RAB1A	99	93.627	ENSPFOG00000000498	-	99	93.627	Poecilia_formosa
ENSSPUG00000012822	RAB1A	99	94.554	ENSPLAG00000015592	-	100	94.554	Poecilia_latipinna
ENSSPUG00000012822	RAB1A	99	94.554	ENSPMEG00000005288	-	100	94.554	Poecilia_mexicana
ENSSPUG00000012822	RAB1A	100	99.512	ENSPPYG00000012360	RAB1A	100	99.512	Pongo_abelii
ENSSPUG00000012822	RAB1A	100	99.512	ENSPCOG00000017244	RAB1A	100	99.512	Propithecus_coquereli
ENSSPUG00000012822	RAB1A	99	96.535	ENSPNYG00000015841	-	100	96.535	Pundamilia_nyererei
ENSSPUG00000012822	RAB1A	100	99.512	ENSRNOG00000004992	Rab1a	100	99.512	Rattus_norvegicus
ENSSPUG00000012822	RAB1A	100	99.512	ENSSBOG00000023732	RAB1A	100	99.512	Saimiri_boliviensis_boliviensis
ENSSPUG00000012822	RAB1A	98	98.507	ENSSHAG00000003597	RAB1A	98	98.507	Sarcophilus_harrisii
ENSSPUG00000012822	RAB1A	99	96.040	ENSSMAG00000021049	-	100	96.040	Scophthalmus_maximus
ENSSPUG00000012822	RAB1A	99	96.535	ENSSDUG00000022535	RAB1A	100	96.535	Seriola_dumerili
ENSSPUG00000012822	RAB1A	99	96.040	ENSSPAG00000012564	-	100	96.040	Stegastes_partitus
ENSSPUG00000012822	RAB1A	100	99.512	ENSSSCG00000008359	RAB1A	100	99.512	Sus_scrofa
ENSSPUG00000012822	RAB1A	100	97.561	ENSTGUG00000002328	RAB1A	100	97.561	Taeniopygia_guttata
ENSSPUG00000012822	RAB1A	99	95.545	ENSTRUG00000024994	RAB1A	100	95.545	Takifugu_rubripes
ENSSPUG00000012822	RAB1A	96	99.492	ENSUMAG00000021038	RAB1A	99	99.492	Ursus_maritimus
ENSSPUG00000012822	RAB1A	97	98.990	ENSVPAG00000005640	RAB1A	99	98.990	Vicugna_pacos
ENSSPUG00000012822	RAB1A	100	99.512	ENSVVUG00000027588	RAB1A	100	99.512	Vulpes_vulpes
ENSSPUG00000012822	RAB1A	99	95.050	ENSXMAG00000015776	-	100	95.050	Xiphophorus_maculatus