EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000012907 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 11154 bases
Position: chrQEPC01014684.1:117098-128251
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000016701	KH_1	PF00013.29	2.3e-07	1	1
ENSSPUP00000016701	zf-CCHC	PF00098.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000017790	SF1-201	2884	-	ENSSPUP00000016701	593 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000012907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000012907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000012907	SF1	58	86.441	ENSAPOG00000012341	sf1	59	79.720	Acanthochromis_polyacanthus
ENSSPUG00000012907	SF1	76	85.033	ENSAMEG00000017828	SF1	78	82.759	Ailuropoda_melanoleuca
ENSSPUG00000012907	SF1	58	86.207	ENSACIG00000016514	sf1	61	80.851	Amphilophus_citrinellus
ENSSPUG00000012907	SF1	58	86.723	ENSAOCG00000010934	sf1	59	79.720	Amphiprion_ocellaris
ENSSPUG00000012907	SF1	58	86.723	ENSAPEG00000009498	sf1	59	79.720	Amphiprion_percula
ENSSPUG00000012907	SF1	58	85.915	ENSATEG00000001894	sf1	59	79.535	Anabas_testudineus
ENSSPUG00000012907	SF1	86	81.418	ENSANAG00000026664	-	85	92.416	Aotus_nancymaae
ENSSPUG00000012907	SF1	86	73.166	ENSANAG00000022607	-	85	82.571	Aotus_nancymaae
ENSSPUG00000012907	SF1	58	87.393	ENSACLG00000007633	sf1	60	79.621	Astatotilapia_calliptera
ENSSPUG00000012907	SF1	59	89.296	ENSAMXG00000003630	sf1	53	81.690	Astyanax_mexicanus
ENSSPUG00000012907	SF1	86	81.226	ENSBTAG00000001035	SF1	79	82.759	Bos_taurus
ENSSPUG00000012907	SF1	86	81.382	ENSCJAG00000002780	SF1	79	82.759	Callithrix_jacchus
ENSSPUG00000012907	SF1	86	81.226	ENSCAFG00000014239	SF1	79	82.759	Canis_familiaris
ENSSPUG00000012907	SF1	86	81.226	ENSCAFG00020014381	SF1	79	82.759	Canis_lupus_dingo
ENSSPUG00000012907	SF1	86	81.382	ENSCHIG00000025867	SF1	80	85.403	Capra_hircus
ENSSPUG00000012907	SF1	69	74.696	ENSTSYG00000033618	SF1	71	98.479	Carlito_syrichta
ENSSPUG00000012907	SF1	68	85.922	ENSCAPG00000010762	SF1	73	85.981	Cavia_aperea
ENSSPUG00000012907	SF1	86	81.190	ENSCPOG00000012290	SF1	82	85.403	Cavia_porcellus
ENSSPUG00000012907	SF1	86	73.386	ENSCCAG00000023781	-	85	74.123	Cebus_capucinus
ENSSPUG00000012907	SF1	86	81.382	ENSCCAG00000037881	SF1	85	92.416	Cebus_capucinus
ENSSPUG00000012907	SF1	86	81.226	ENSCATG00000011564	SF1	85	92.416	Cercocebus_atys
ENSSPUG00000012907	SF1	86	81.382	ENSCSAG00000007258	SF1	80	85.403	Chlorocebus_sabaeus
ENSSPUG00000012907	SF1	68	79.462	ENSCHOG00000006008	SF1	76	79.765	Choloepus_hoffmanni
ENSSPUG00000012907	SF1	100	89.430	ENSCPBG00000023763	SF1	75	88.087	Chrysemys_picta_bellii
ENSSPUG00000012907	SF1	78	54.701	ENSCSAVG00000009055	-	60	69.444	Ciona_savignyi
ENSSPUG00000012907	SF1	86	81.226	ENSCANG00000042201	SF1	85	92.416	Colobus_angolensis_palliatus
ENSSPUG00000012907	SF1	86	81.034	ENSCGRG00001003677	Sf1	79	82.567	Cricetulus_griseus_chok1gshd
ENSSPUG00000012907	SF1	86	80.998	ENSCGRG00000001708	Sf1	81	85.185	Cricetulus_griseus_crigri
ENSSPUG00000012907	SF1	65	81.170	ENSCSEG00000014375	sf1	57	78.140	Cynoglossus_semilaevis
ENSSPUG00000012907	SF1	58	89.565	ENSCVAG00000001670	sf1	63	80.000	Cyprinodon_variegatus
ENSSPUG00000012907	SF1	63	86.053	ENSDARG00000008188	sf1	76	71.124	Danio_rerio
ENSSPUG00000012907	SF1	86	81.574	ENSDNOG00000001282	SF1	80	85.621	Dasypus_novemcinctus
ENSSPUG00000012907	SF1	86	81.226	ENSDORG00000016334	Sf1	79	82.759	Dipodomys_ordii
ENSSPUG00000012907	SF1	76	77.391	ENSETEG00000012830	SF1	70	75.479	Echinops_telfairi
ENSSPUG00000012907	SF1	86	80.998	ENSEASG00005018272	SF1	80	84.967	Equus_asinus_asinus
ENSSPUG00000012907	SF1	86	81.190	ENSECAG00000024544	SF1	80	85.185	Equus_caballus
ENSSPUG00000012907	SF1	64	85.417	ENSEEUG00000001058	SF1	97	85.500	Erinaceus_europaeus
ENSSPUG00000012907	SF1	65	81.586	ENSELUG00000013225	sf1	53	78.689	Esox_lucius
ENSSPUG00000012907	SF1	86	81.382	ENSFCAG00000012231	SF1	79	82.759	Felis_catus
ENSSPUG00000012907	SF1	68	85.922	ENSFDAG00000009833	SF1	73	85.981	Fukomys_damarensis
ENSSPUG00000012907	SF1	58	86.517	ENSFHEG00000022656	sf1	59	79.070	Fundulus_heteroclitus
ENSSPUG00000012907	SF1	51	89.744	ENSGMOG00000007469	sf1	56	89.902	Gadus_morhua
ENSSPUG00000012907	SF1	58	87.042	ENSGAFG00000019284	sf1	76	77.829	Gambusia_affinis
ENSSPUG00000012907	SF1	76	90.244	ENSGAGG00000021691	SF1	81	88.087	Gopherus_agassizii
ENSSPUG00000012907	SF1	58	85.634	ENSHBUG00000011598	sf1	59	79.953	Haplochromis_burtoni
ENSSPUG00000012907	SF1	76	85.033	ENSHGLG00000009541	SF1	79	82.759	Heterocephalus_glaber_female
ENSSPUG00000012907	SF1	73	79.688	ENSHGLG00100008255	-	90	80.134	Heterocephalus_glaber_male
ENSSPUG00000012907	SF1	75	79.688	ENSHGLG00100008076	-	86	79.458	Heterocephalus_glaber_male
ENSSPUG00000012907	SF1	74	84.821	ENSHGLG00100013879	-	80	85.268	Heterocephalus_glaber_male
ENSSPUG00000012907	SF1	59	85.399	ENSHCOG00000011388	sf1	59	77.622	Hippocampus_comes
ENSSPUG00000012907	SF1	76	73.970	ENSSTOG00000024353	-	72	75.701	Ictidomys_tridecemlineatus
ENSSPUG00000012907	SF1	86	81.226	ENSSTOG00000009790	-	80	82.759	Ictidomys_tridecemlineatus
ENSSPUG00000012907	SF1	86	81.418	ENSJJAG00000011788	Sf1	79	82.950	Jaculus_jaculus
ENSSPUG00000012907	SF1	59	86.872	ENSKMAG00000005854	sf1	61	79.953	Kryptolebias_marmoratus
ENSSPUG00000012907	SF1	59	84.807	ENSLBEG00000019836	sf1	63	77.726	Labrus_bergylta
ENSSPUG00000012907	SF1	59	88.952	ENSLOCG00000002130	sf1	62	81.412	Lepisosteus_oculatus
ENSSPUG00000012907	SF1	86	81.034	ENSLAFG00000007201	SF1	78	82.567	Loxodonta_africana
ENSSPUG00000012907	SF1	86	81.226	ENSMFAG00000033122	SF1	85	92.416	Macaca_fascicularis
ENSSPUG00000012907	SF1	86	81.382	ENSMMUG00000022606	SF1	87	92.717	Macaca_mulatta
ENSSPUG00000012907	SF1	86	81.226	ENSMNEG00000037901	SF1	85	92.416	Macaca_nemestrina
ENSSPUG00000012907	SF1	86	81.226	ENSMLEG00000040706	SF1	86	92.416	Mandrillus_leucophaeus
ENSSPUG00000012907	SF1	58	86.761	ENSMAMG00000001780	sf1	59	79.535	Mastacembelus_armatus
ENSSPUG00000012907	SF1	58	85.634	ENSMZEG00005009196	sf1	59	79.953	Maylandia_zebra
ENSSPUG00000012907	SF1	86	81.034	ENSMAUG00000014064	Sf1	79	82.567	Mesocricetus_auratus
ENSSPUG00000012907	SF1	86	81.382	ENSMICG00000001202	SF1	85	92.157	Microcebus_murinus
ENSSPUG00000012907	SF1	76	84.816	ENSMOCG00000022038	Sf1	79	82.567	Microtus_ochrogaster
ENSSPUG00000012907	SF1	58	86.207	ENSMMOG00000020474	sf1	59	79.433	Mola_mola
ENSSPUG00000012907	SF1	68	86.441	ENSMODG00000029407	SF1	89	85.981	Monodelphis_domestica
ENSSPUG00000012907	SF1	58	86.416	ENSMALG00000020521	sf1	67	79.572	Monopterus_albus
ENSSPUG00000012907	SF1	86	81.190	MGP_CAROLIEiJ_G0022607	Sf1	100	98.502	Mus_caroli
ENSSPUG00000012907	SF1	86	81.190	ENSMUSG00000024949	Sf1	100	98.502	Mus_musculus
ENSSPUG00000012907	SF1	86	81.190	MGP_PahariEiJ_G0014101	Sf1	100	98.502	Mus_pahari
ENSSPUG00000012907	SF1	86	81.190	MGP_SPRETEiJ_G0023518	Sf1	100	98.502	Mus_spretus
ENSSPUG00000012907	SF1	86	81.418	ENSMPUG00000012684	SF1	79	82.950	Mustela_putorius_furo
ENSSPUG00000012907	SF1	86	80.843	ENSMLUG00000015217	-	79	82.759	Myotis_lucifugus
ENSSPUG00000012907	SF1	75	81.596	ENSMLUG00000029800	-	74	81.473	Myotis_lucifugus
ENSSPUG00000012907	SF1	86	81.418	ENSNGAG00000005550	Sf1	79	82.950	Nannospalax_galili
ENSSPUG00000012907	SF1	58	87.679	ENSNBRG00000017606	sf1	61	81.087	Neolamprologus_brichardi
ENSSPUG00000012907	SF1	86	81.071	ENSNLEG00000005236	-	85	92.416	Nomascus_leucogenys
ENSSPUG00000012907	SF1	86	81.923	ENSMEUG00000013424	SF1	95	83.462	Notamacropus_eugenii
ENSSPUG00000012907	SF1	81	80.325	ENSOPRG00000005008	SF1	99	80.512	Ochotona_princeps
ENSSPUG00000012907	SF1	76	82.646	ENSODEG00000006102	-	76	78.764	Octodon_degus
ENSSPUG00000012907	SF1	58	85.352	ENSONIG00000015728	sf1	59	79.720	Oreochromis_niloticus
ENSSPUG00000012907	SF1	68	78.398	ENSOANG00000002909	SF1	96	77.506	Ornithorhynchus_anatinus
ENSSPUG00000012907	SF1	76	85.033	ENSOCUG00000026486	SF1	80	82.759	Oryctolagus_cuniculus
ENSSPUG00000012907	SF1	63	81.984	ENSORLG00000011853	sf1	58	77.855	Oryzias_latipes
ENSSPUG00000012907	SF1	63	81.984	ENSORLG00020011834	sf1	58	77.389	Oryzias_latipes_hni
ENSSPUG00000012907	SF1	59	85.196	ENSORLG00015012855	sf1	59	77.622	Oryzias_latipes_hsok
ENSSPUG00000012907	SF1	59	85.754	ENSOMEG00000005210	sf1	60	78.555	Oryzias_melastigma
ENSSPUG00000012907	SF1	86	81.226	ENSOGAG00000016196	SF1	79	82.759	Otolemur_garnettii
ENSSPUG00000012907	SF1	76	85.033	ENSOARG00000009166	SF1	77	85.403	Ovis_aries
ENSSPUG00000012907	SF1	86	82.819	ENSPPAG00000002799	-	87	92.416	Pan_paniscus
ENSSPUG00000012907	SF1	86	81.226	ENSPPRG00000013566	SF1	82	82.759	Panthera_pardus
ENSSPUG00000012907	SF1	68	85.922	ENSPTIG00000016141	SF1	73	85.981	Panthera_tigris_altaica
ENSSPUG00000012907	SF1	86	82.819	ENSPTRG00000003846	SF1	94	85.816	Pan_troglodytes
ENSSPUG00000012907	SF1	86	81.382	ENSPANG00000020754	SF1	85	92.416	Papio_anubis
ENSSPUG00000012907	SF1	56	78.613	ENSPKIG00000012116	sf1	92	74.550	Paramormyrops_kingsleyae
ENSSPUG00000012907	SF1	61	87.879	ENSPSIG00000003610	SF1	81	86.085	Pelodiscus_sinensis
ENSSPUG00000012907	SF1	86	81.034	ENSPEMG00000010463	Sf1	79	82.567	Peromyscus_maniculatus_bairdii
ENSSPUG00000012907	SF1	86	81.958	ENSPCIG00000018173	SF1	79	83.301	Phascolarctos_cinereus
ENSSPUG00000012907	SF1	58	89.017	ENSPFOG00000013683	sf1	66	80.476	Poecilia_formosa
ENSSPUG00000012907	SF1	58	86.761	ENSPLAG00000018076	sf1	61	79.254	Poecilia_latipinna
ENSSPUG00000012907	SF1	58	87.324	ENSPMEG00000005726	sf1	62	79.254	Poecilia_mexicana
ENSSPUG00000012907	SF1	58	86.761	ENSPREG00000004155	sf1	59	78.788	Poecilia_reticulata
ENSSPUG00000012907	SF1	86	81.453	ENSPPYG00000003098	-	95	82.983	Pongo_abelii
ENSSPUG00000012907	SF1	86	80.998	ENSPCAG00000013631	SF1	78	80.407	Procavia_capensis
ENSSPUG00000012907	SF1	86	81.226	ENSPCOG00000027546	SF1	85	92.157	Propithecus_coquereli
ENSSPUG00000012907	SF1	86	81.574	ENSPVAG00000016938	SF1	75	83.109	Pteropus_vampyrus
ENSSPUG00000012907	SF1	58	85.634	ENSPNYG00000004673	sf1	59	79.953	Pundamilia_nyererei
ENSSPUG00000012907	SF1	59	89.014	ENSPNAG00000013072	sf1	60	82.160	Pygocentrus_nattereri
ENSSPUG00000012907	SF1	86	81.034	ENSRNOG00000021085	Sf1	79	82.567	Rattus_norvegicus
ENSSPUG00000012907	SF1	77	85.065	ENSRBIG00000042818	SF1	85	92.416	Rhinopithecus_bieti
ENSSPUG00000012907	SF1	86	82.308	ENSRROG00000045655	SF1	96	82.917	Rhinopithecus_roxellana
ENSSPUG00000012907	SF1	93	64.007	ENSSBOG00000022267	-	85	80.175	Saimiri_boliviensis_boliviensis
ENSSPUG00000012907	SF1	65	89.203	ENSSHAG00000006841	SF1	70	88.630	Sarcophilus_harrisii
ENSSPUG00000012907	SF1	65	84.021	ENSSFOG00015021978	sf1	58	80.471	Scleropages_formosus
ENSSPUG00000012907	SF1	68	80.000	ENSSMAG00000007549	sf1	63	80.000	Scophthalmus_maximus
ENSSPUG00000012907	SF1	58	85.915	ENSSDUG00000003903	sf1	61	79.767	Seriola_dumerili
ENSSPUG00000012907	SF1	58	85.915	ENSSLDG00000013075	sf1	59	79.767	Seriola_lalandi_dorsalis
ENSSPUG00000012907	SF1	86	75.048	ENSSARG00000008180	SF1	97	77.395	Sorex_araneus
ENSSPUG00000012907	SF1	58	87.006	ENSSPAG00000019060	sf1	59	80.653	Stegastes_partitus
ENSSPUG00000012907	SF1	86	81.382	ENSSSCG00000013021	SF1	80	85.403	Sus_scrofa
ENSSPUG00000012907	SF1	63	71.979	ENSTNIG00000004820	sf1	93	62.476	Tetraodon_nigroviridis
ENSSPUG00000012907	SF1	77	78.186	ENSTBEG00000013133	SF1	64	78.649	Tupaia_belangeri
ENSSPUG00000012907	SF1	86	76.775	ENSTTRG00000008857	SF1	81	80.392	Tursiops_truncatus
ENSSPUG00000012907	SF1	71	78.089	ENSUAMG00000011977	SF1	78	79.720	Ursus_americanus
ENSSPUG00000012907	SF1	77	86.154	ENSUMAG00000007268	SF1	84	85.403	Ursus_maritimus
ENSSPUG00000012907	SF1	59	99.571	ENSVPAG00000011912	SF1	61	99.571	Vicugna_pacos
ENSSPUG00000012907	SF1	86	81.382	ENSVVUG00000028585	SF1	80	85.403	Vulpes_vulpes
ENSSPUG00000012907	SF1	86	70.802	ENSXETG00000008434	sf1	67	80.383	Xenopus_tropicalis
ENSSPUG00000012907	SF1	58	87.931	ENSXCOG00000003704	sf1	76	80.095	Xiphophorus_couchianus
ENSSPUG00000012907	SF1	58	86.761	ENSXMAG00000007822	sf1	61	79.487	Xiphophorus_maculatus