EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000013054 (Gene tree)
Gene ID: -
Gene Symbol: CCDC12
Alias: MGC23918
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 87203 bases
Position: chrQEPC01000895.1:1180927-1268129
Accession: 28332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000016915	cwf18	PF08315.12	2.4e-19	1	1
ENSSPUP00000016926	cwf18	PF08315.12	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000018027	CCDC12-202	414	-	ENSSPUP00000016926	137 (aa)	-	-
ENSSPUT00000018017	CCDC12-201	543	-	ENSSPUP00000016915	180 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000013054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000013054's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000013054	CCDC12	91	51.351	ENSG00000160799	CCDC12	98	64.045	Homo_sapiens
ENSSPUG00000013054	CCDC12	91	53.741	ENSAPOG00000014426	ccdc12	54	53.741	Acanthochromis_polyacanthus
ENSSPUG00000013054	CCDC12	91	50.676	ENSAMEG00000012658	CCDC12	69	73.043	Ailuropoda_melanoleuca
ENSSPUG00000013054	CCDC12	69	61.062	ENSACIG00000015192	ccdc12	81	61.062	Amphilophus_citrinellus
ENSSPUG00000013054	CCDC12	69	61.607	ENSACIG00000022676	-	80	61.607	Amphilophus_citrinellus
ENSSPUG00000013054	CCDC12	91	53.741	ENSAOCG00000024127	ccdc12	88	53.741	Amphiprion_ocellaris
ENSSPUG00000013054	CCDC12	91	53.741	ENSAPEG00000009155	ccdc12	77	53.741	Amphiprion_percula
ENSSPUG00000013054	CCDC12	69	61.607	ENSATEG00000004807	ccdc12	84	61.607	Anabas_testudineus
ENSSPUG00000013054	CCDC12	69	65.179	ENSAPLG00000005482	CCDC12	82	65.179	Anas_platyrhynchos
ENSSPUG00000013054	CCDC12	91	55.921	ENSACAG00000004727	CCDC12	77	55.921	Anolis_carolinensis
ENSSPUG00000013054	CCDC12	69	59.292	ENSANAG00000024483	CCDC12	84	59.292	Aotus_nancymaae
ENSSPUG00000013054	CCDC12	91	44.218	ENSACLG00000012742	-	91	44.218	Astatotilapia_calliptera
ENSSPUG00000013054	CCDC12	91	51.701	ENSACLG00000005356	ccdc12	90	51.701	Astatotilapia_calliptera
ENSSPUG00000013054	CCDC12	91	51.020	ENSAMXG00000016319	ccdc12	90	51.020	Astyanax_mexicanus
ENSSPUG00000013054	CCDC12	62	72.174	ENSBTAG00000011311	CCDC12	89	52.000	Bos_taurus
ENSSPUG00000013054	CCDC12	91	51.351	ENSCJAG00000002280	CCDC12	89	51.351	Callithrix_jacchus
ENSSPUG00000013054	CCDC12	91	50.676	ENSCAFG00000013588	CCDC12	69	72.174	Canis_familiaris
ENSSPUG00000013054	CCDC12	91	50.676	ENSCAFG00020014024	CCDC12	64	72.174	Canis_lupus_dingo
ENSSPUG00000013054	CCDC12	62	72.174	ENSCHIG00000014512	CCDC12	89	52.000	Capra_hircus
ENSSPUG00000013054	CCDC12	62	69.565	ENSTSYG00000032837	CCDC12	69	69.565	Carlito_syrichta
ENSSPUG00000013054	CCDC12	91	49.324	ENSCPOG00000032515	CCDC12	89	49.324	Cavia_porcellus
ENSSPUG00000013054	CCDC12	91	51.351	ENSCCAG00000020126	CCDC12	82	51.351	Cebus_capucinus
ENSSPUG00000013054	CCDC12	91	41.497	ENSCATG00000033681	CCDC12	81	41.447	Cercocebus_atys
ENSSPUG00000013054	CCDC12	91	50.000	ENSCLAG00000016013	CCDC12	89	50.000	Chinchilla_lanigera
ENSSPUG00000013054	CCDC12	91	50.676	ENSCSAG00000016154	CCDC12	63	71.053	Chlorocebus_sabaeus
ENSSPUG00000013054	CCDC12	91	58.108	ENSCPBG00000015804	CCDC12	56	78.448	Chrysemys_picta_bellii
ENSSPUG00000013054	CCDC12	57	47.170	ENSCING00000005261	-	62	47.170	Ciona_intestinalis
ENSSPUG00000013054	CCDC12	91	50.676	ENSCANG00000020857	CCDC12	63	71.053	Colobus_angolensis_palliatus
ENSSPUG00000013054	CCDC12	91	49.324	ENSCGRG00001000459	Ccdc12	69	73.043	Cricetulus_griseus_chok1gshd
ENSSPUG00000013054	CCDC12	91	49.324	ENSCGRG00000012816	Ccdc12	69	73.043	Cricetulus_griseus_crigri
ENSSPUG00000013054	CCDC12	91	51.408	ENSCSEG00000004543	ccdc12	89	51.408	Cynoglossus_semilaevis
ENSSPUG00000013054	CCDC12	69	61.607	ENSCVAG00000011342	ccdc12	84	61.607	Cyprinodon_variegatus
ENSSPUG00000013054	CCDC12	91	51.701	ENSDARG00000023003	ccdc12	90	51.701	Danio_rerio
ENSSPUG00000013054	CCDC12	61	70.536	ENSDORG00000016567	-	68	70.536	Dipodomys_ordii
ENSSPUG00000013054	CCDC12	72	53.103	ENSDORG00000024399	-	88	53.793	Dipodomys_ordii
ENSSPUG00000013054	CCDC12	66	33.607	FBgn0039732	CG15525	70	33.607	Drosophila_melanogaster
ENSSPUG00000013054	CCDC12	60	70.536	ENSETEG00000000030	CCDC12	99	70.536	Echinops_telfairi
ENSSPUG00000013054	CCDC12	59	52.778	ENSEBUG00000005674	ccdc12	90	38.621	Eptatretus_burgeri
ENSSPUG00000013054	CCDC12	91	49.324	ENSEASG00005008148	-	61	49.324	Equus_asinus_asinus
ENSSPUG00000013054	CCDC12	91	43.919	ENSECAG00000008649	CCDC12	89	43.919	Equus_caballus
ENSSPUG00000013054	CCDC12	84	50.360	ENSELUG00000024105	ccdc12	88	58.182	Esox_lucius
ENSSPUG00000013054	CCDC12	91	50.000	ENSFCAG00000015474	CCDC12	69	71.304	Felis_catus
ENSSPUG00000013054	CCDC12	89	50.658	ENSFALG00000001895	CCDC12	92	50.658	Ficedula_albicollis
ENSSPUG00000013054	CCDC12	91	49.324	ENSFDAG00000002549	CCDC12	68	72.174	Fukomys_damarensis
ENSSPUG00000013054	CCDC12	91	52.381	ENSFHEG00000016247	ccdc12	84	52.381	Fundulus_heteroclitus
ENSSPUG00000013054	CCDC12	67	59.091	ENSGMOG00000016901	ccdc12	69	58.407	Gadus_morhua
ENSSPUG00000013054	CCDC12	91	53.061	ENSGAFG00000006762	ccdc12	86	59.292	Gambusia_affinis
ENSSPUG00000013054	CCDC12	91	54.225	ENSGACG00000008629	ccdc12	89	54.225	Gasterosteus_aculeatus
ENSSPUG00000013054	CCDC12	91	58.108	ENSGAGG00000019688	CCDC12	70	78.814	Gopherus_agassizii
ENSSPUG00000013054	CCDC12	91	51.351	ENSGGOG00000009012	CCDC12	63	71.053	Gorilla_gorilla
ENSSPUG00000013054	CCDC12	91	51.701	ENSHBUG00000016447	ccdc12	90	51.701	Haplochromis_burtoni
ENSSPUG00000013054	CCDC12	91	50.000	ENSHGLG00000014058	CCDC12	69	71.304	Heterocephalus_glaber_female
ENSSPUG00000013054	CCDC12	91	50.000	ENSHGLG00100005918	CCDC12	69	71.304	Heterocephalus_glaber_male
ENSSPUG00000013054	CCDC12	91	47.973	ENSHCOG00000015164	ccdc12	90	47.973	Hippocampus_comes
ENSSPUG00000013054	CCDC12	91	51.020	ENSIPUG00000001310	Ccdc12	90	51.020	Ictalurus_punctatus
ENSSPUG00000013054	CCDC12	91	50.000	ENSSTOG00000003085	CCDC12	69	71.304	Ictidomys_tridecemlineatus
ENSSPUG00000013054	CCDC12	91	48.649	ENSJJAG00000014918	Ccdc12	79	64.602	Jaculus_jaculus
ENSSPUG00000013054	CCDC12	90	50.000	ENSKMAG00000013891	ccdc12	90	50.000	Kryptolebias_marmoratus
ENSSPUG00000013054	CCDC12	91	51.370	ENSLBEG00000024714	ccdc12	58	72.477	Labrus_bergylta
ENSSPUG00000013054	CCDC12	91	50.000	ENSLOCG00000005683	ccdc12	82	50.000	Lepisosteus_oculatus
ENSSPUG00000013054	CCDC12	68	58.929	ENSLAFG00000022573	-	98	58.929	Loxodonta_africana
ENSSPUG00000013054	CCDC12	62	69.912	ENSLAFG00000027745	-	69	69.298	Loxodonta_africana
ENSSPUG00000013054	CCDC12	91	50.676	ENSMFAG00000002976	CCDC12	63	71.053	Macaca_fascicularis
ENSSPUG00000013054	CCDC12	91	50.676	ENSMMUG00000019810	CCDC12	63	71.053	Macaca_mulatta
ENSSPUG00000013054	CCDC12	91	50.676	ENSMNEG00000035785	CCDC12	63	71.053	Macaca_nemestrina
ENSSPUG00000013054	CCDC12	91	50.676	ENSMLEG00000038060	CCDC12	63	71.053	Mandrillus_leucophaeus
ENSSPUG00000013054	CCDC12	91	51.020	ENSMAMG00000012165	ccdc12	85	59.821	Mastacembelus_armatus
ENSSPUG00000013054	CCDC12	91	44.218	ENSMZEG00005019013	-	91	44.218	Maylandia_zebra
ENSSPUG00000013054	CCDC12	91	51.701	ENSMZEG00005014728	ccdc12	90	51.701	Maylandia_zebra
ENSSPUG00000013054	CCDC12	69	63.393	ENSMGAG00000002815	CCDC12	83	54.054	Meleagris_gallopavo
ENSSPUG00000013054	CCDC12	91	49.324	ENSMAUG00000008879	Ccdc12	69	73.913	Mesocricetus_auratus
ENSSPUG00000013054	CCDC12	91	49.664	ENSMICG00000032886	CCDC12	89	49.664	Microcebus_murinus
ENSSPUG00000013054	CCDC12	91	48.649	ENSMOCG00000004483	Ccdc12	69	71.304	Microtus_ochrogaster
ENSSPUG00000013054	CCDC12	68	57.658	ENSMMOG00000001860	ccdc12	77	57.658	Mola_mola
ENSSPUG00000013054	CCDC12	91	48.649	ENSMODG00000025021	-	88	48.649	Monodelphis_domestica
ENSSPUG00000013054	CCDC12	91	54.362	ENSMODG00000013967	-	71	72.174	Monodelphis_domestica
ENSSPUG00000013054	CCDC12	91	47.973	ENSMODG00000022615	-	88	47.973	Monodelphis_domestica
ENSSPUG00000013054	CCDC12	91	51.701	ENSMALG00000011850	ccdc12	90	51.701	Monopterus_albus
ENSSPUG00000013054	CCDC12	91	49.324	MGP_CAROLIEiJ_G0032737	-	68	71.681	Mus_caroli
ENSSPUG00000013054	CCDC12	91	49.324	ENSMUSG00000019659	Ccdc12	86	60.656	Mus_musculus
ENSSPUG00000013054	CCDC12	91	49.324	MGP_PahariEiJ_G0015604	Ccdc12	82	63.248	Mus_pahari
ENSSPUG00000013054	CCDC12	91	49.324	MGP_SPRETEiJ_G0033885	Ccdc12	80	63.158	Mus_spretus
ENSSPUG00000013054	CCDC12	67	58.871	ENSMPUG00000015080	-	50	58.871	Mustela_putorius_furo
ENSSPUG00000013054	CCDC12	91	47.973	ENSMLUG00000009547	CCDC12	91	50.407	Myotis_lucifugus
ENSSPUG00000013054	CCDC12	61	69.912	ENSNGAG00000004149	Ccdc12	89	50.000	Nannospalax_galili
ENSSPUG00000013054	CCDC12	91	49.351	ENSNBRG00000015275	ccdc12	90	49.351	Neolamprologus_brichardi
ENSSPUG00000013054	CCDC12	91	51.351	ENSNLEG00000006219	CCDC12	89	51.351	Nomascus_leucogenys
ENSSPUG00000013054	CCDC12	62	69.298	ENSOPRG00000005086	CCDC12	69	70.175	Ochotona_princeps
ENSSPUG00000013054	CCDC12	91	49.324	ENSODEG00000012202	CCDC12	69	70.435	Octodon_degus
ENSSPUG00000013054	CCDC12	91	51.701	ENSONIG00000003061	ccdc12	90	51.701	Oreochromis_niloticus
ENSSPUG00000013054	CCDC12	70	64.912	ENSOANG00000004263	-	86	64.912	Ornithorhynchus_anatinus
ENSSPUG00000013054	CCDC12	91	50.000	ENSOCUG00000012431	CCDC12	58	73.043	Oryctolagus_cuniculus
ENSSPUG00000013054	CCDC12	91	45.890	ENSORLG00000008126	ccdc12	90	45.890	Oryzias_latipes
ENSSPUG00000013054	CCDC12	91	52.381	ENSORLG00020013927	ccdc12	90	52.381	Oryzias_latipes_hni
ENSSPUG00000013054	CCDC12	91	52.381	ENSORLG00015020115	ccdc12	90	52.381	Oryzias_latipes_hsok
ENSSPUG00000013054	CCDC12	91	52.381	ENSOMEG00000022304	ccdc12	90	52.381	Oryzias_melastigma
ENSSPUG00000013054	CCDC12	91	52.381	ENSOMEG00000014082	ccdc12	90	52.381	Oryzias_melastigma
ENSSPUG00000013054	CCDC12	68	56.250	ENSOGAG00000016807	CCDC12	100	56.250	Otolemur_garnettii
ENSSPUG00000013054	CCDC12	69	53.390	ENSOARG00000006426	CCDC12	99	52.941	Ovis_aries
ENSSPUG00000013054	CCDC12	91	51.351	ENSPPAG00000028782	CCDC12	63	71.053	Pan_paniscus
ENSSPUG00000013054	CCDC12	91	50.000	ENSPPRG00000013547	CCDC12	69	71.304	Panthera_pardus
ENSSPUG00000013054	CCDC12	91	50.000	ENSPTIG00000014875	CCDC12	66	71.304	Panthera_tigris_altaica
ENSSPUG00000013054	CCDC12	91	51.351	ENSPTRG00000014862	CCDC12	63	71.053	Pan_troglodytes
ENSSPUG00000013054	CCDC12	91	50.676	ENSPANG00000017485	CCDC12	64	71.053	Papio_anubis
ENSSPUG00000013054	CCDC12	91	47.973	ENSPKIG00000019130	ccdc12	90	48.649	Paramormyrops_kingsleyae
ENSSPUG00000013054	CCDC12	68	69.369	ENSPSIG00000010867	CCDC12	100	69.369	Pelodiscus_sinensis
ENSSPUG00000013054	CCDC12	91	53.061	ENSPMGG00000012211	ccdc12	90	53.061	Periophthalmus_magnuspinnatus
ENSSPUG00000013054	CCDC12	90	42.963	ENSPEMG00000001376	-	87	42.963	Peromyscus_maniculatus_bairdii
ENSSPUG00000013054	CCDC12	91	49.324	ENSPEMG00000022196	-	69	73.043	Peromyscus_maniculatus_bairdii
ENSSPUG00000013054	CCDC12	91	50.000	ENSPMAG00000000005	ccdc12	86	50.000	Petromyzon_marinus
ENSSPUG00000013054	CCDC12	91	55.102	ENSPCIG00000025941	CCDC12	70	73.451	Phascolarctos_cinereus
ENSSPUG00000013054	CCDC12	72	62.136	ENSPFOG00000000343	ccdc12	90	53.741	Poecilia_formosa
ENSSPUG00000013054	CCDC12	91	53.061	ENSPLAG00000019010	ccdc12	90	53.061	Poecilia_latipinna
ENSSPUG00000013054	CCDC12	72	62.136	ENSPMEG00000022371	ccdc12	73	53.741	Poecilia_mexicana
ENSSPUG00000013054	CCDC12	91	53.061	ENSPREG00000020932	ccdc12	73	53.061	Poecilia_reticulata
ENSSPUG00000013054	CCDC12	91	51.351	ENSPPYG00000013924	CCDC12	55	71.053	Pongo_abelii
ENSSPUG00000013054	CCDC12	62	72.174	ENSPCAG00000005800	CCDC12	69	72.174	Procavia_capensis
ENSSPUG00000013054	CCDC12	91	50.336	ENSPCOG00000018682	CCDC12	63	70.175	Propithecus_coquereli
ENSSPUG00000013054	CCDC12	91	49.324	ENSPVAG00000004204	CCDC12	69	70.435	Pteropus_vampyrus
ENSSPUG00000013054	CCDC12	91	53.061	ENSPNYG00000016295	ccdc12	90	53.061	Pundamilia_nyererei
ENSSPUG00000013054	CCDC12	69	59.292	ENSPNAG00000028558	ccdc12	91	59.292	Pygocentrus_nattereri
ENSSPUG00000013054	CCDC12	91	49.324	ENSRNOG00000020946	Ccdc12	68	71.681	Rattus_norvegicus
ENSSPUG00000013054	CCDC12	91	50.676	ENSRBIG00000039910	CCDC12	63	71.053	Rhinopithecus_bieti
ENSSPUG00000013054	CCDC12	91	50.676	ENSRROG00000039721	CCDC12	89	50.676	Rhinopithecus_roxellana
ENSSPUG00000013054	CCDC12	91	51.351	ENSSBOG00000035443	CCDC12	82	51.351	Saimiri_boliviensis_boliviensis
ENSSPUG00000013054	CCDC12	91	55.479	ENSSHAG00000003265	-	70	75.000	Sarcophilus_harrisii
ENSSPUG00000013054	CCDC12	91	46.622	ENSSFOG00015001307	ccdc12	90	46.622	Scleropages_formosus
ENSSPUG00000013054	CCDC12	72	60.194	ENSSMAG00000019856	ccdc12	90	50.676	Scophthalmus_maximus
ENSSPUG00000013054	CCDC12	91	52.381	ENSSDUG00000006549	ccdc12	90	52.381	Seriola_dumerili
ENSSPUG00000013054	CCDC12	91	52.381	ENSSLDG00000015956	ccdc12	90	52.381	Seriola_lalandi_dorsalis
ENSSPUG00000013054	CCDC12	91	53.741	ENSSPAG00000007010	ccdc12	90	53.741	Stegastes_partitus
ENSSPUG00000013054	CCDC12	91	49.660	ENSSSCG00000011329	-	69	71.304	Sus_scrofa
ENSSPUG00000013054	CCDC12	65	39.316	ENSSSCG00000007882	-	73	39.316	Sus_scrofa
ENSSPUG00000013054	CCDC12	66	63.265	ENSTGUG00000000186	CCDC12	90	67.857	Taeniopygia_guttata
ENSSPUG00000013054	CCDC12	91	50.704	ENSTRUG00000014023	ccdc12	76	50.704	Takifugu_rubripes
ENSSPUG00000013054	CCDC12	69	58.036	ENSTNIG00000018407	ccdc12	65	66.355	Tetraodon_nigroviridis
ENSSPUG00000013054	CCDC12	91	31.544	ENSTBEG00000000048	CCDC12	89	31.544	Tupaia_belangeri
ENSSPUG00000013054	CCDC12	69	58.772	ENSTTRG00000015854	CCDC12	68	62.903	Tursiops_truncatus
ENSSPUG00000013054	CCDC12	91	45.270	ENSUAMG00000025548	CCDC12	79	72.174	Ursus_americanus
ENSSPUG00000013054	CCDC12	91	50.676	ENSUMAG00000004346	CCDC12	69	72.174	Ursus_maritimus
ENSSPUG00000013054	CCDC12	61	62.281	ENSVPAG00000000070	-	100	62.281	Vicugna_pacos
ENSSPUG00000013054	CCDC12	91	50.676	ENSVVUG00000004582	CCDC12	69	72.174	Vulpes_vulpes
ENSSPUG00000013054	CCDC12	69	60.714	ENSXETG00000013123	ccdc12	84	60.714	Xenopus_tropicalis
ENSSPUG00000013054	CCDC12	91	52.381	ENSXCOG00000019741	ccdc12	90	52.381	Xiphophorus_couchianus
ENSSPUG00000013054	CCDC12	91	53.061	ENSXMAG00000014098	ccdc12	73	53.061	Xiphophorus_maculatus