EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000013101 (Gene tree)
Gene ID: -
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 33295 bases
Position: chrQEPC01008443.1:1309885-1343179
Accession: 11301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000016942	SRP54	PF00448.22	7.7e-78	1	1
ENSSPUP00000016942	SRP54_N	PF02881.19	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000018045	SRP54-201	2329	-	ENSSPUP00000016942	504 (aa)	-	UPI0003890341

Gene Model

Click here to download ENSSPUG00000013101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000013101's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000013101	SRP54	100	99.206	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSSPUG00000013101	SRP54	100	95.833	ENSAPOG00000011314	srp54	100	95.833	Acanthochromis_polyacanthus
ENSSPUG00000013101	SRP54	100	99.206	ENSAMEG00000015544	SRP54	100	99.206	Ailuropoda_melanoleuca
ENSSPUG00000013101	SRP54	89	94.209	ENSACIG00000022831	srp54	97	94.209	Amphilophus_citrinellus
ENSSPUG00000013101	SRP54	100	95.833	ENSAOCG00000019401	srp54	100	95.833	Amphiprion_ocellaris
ENSSPUG00000013101	SRP54	100	95.833	ENSAPEG00000001977	srp54	100	95.833	Amphiprion_percula
ENSSPUG00000013101	SRP54	100	96.230	ENSATEG00000013877	srp54	100	96.230	Anabas_testudineus
ENSSPUG00000013101	SRP54	94	99.578	ENSAPLG00000010125	SRP54	95	99.578	Anas_platyrhynchos
ENSSPUG00000013101	SRP54	100	99.405	ENSACAG00000002103	-	100	99.405	Anolis_carolinensis
ENSSPUG00000013101	SRP54	65	82.477	ENSACAG00000001124	-	100	82.477	Anolis_carolinensis
ENSSPUG00000013101	SRP54	86	96.544	ENSACAG00000010631	-	100	96.544	Anolis_carolinensis
ENSSPUG00000013101	SRP54	100	99.206	ENSANAG00000022133	SRP54	100	99.206	Aotus_nancymaae
ENSSPUG00000013101	SRP54	100	96.032	ENSACLG00000015866	srp54	100	96.032	Astatotilapia_calliptera
ENSSPUG00000013101	SRP54	100	96.032	ENSAMXG00000032669	SRP54	100	96.032	Astyanax_mexicanus
ENSSPUG00000013101	SRP54	100	99.206	ENSBTAG00000019085	SRP54	100	99.206	Bos_taurus
ENSSPUG00000013101	SRP54	98	71.687	WBGene00009012	F21D5.7	100	71.687	Caenorhabditis_elegans
ENSSPUG00000013101	SRP54	100	99.206	ENSCJAG00000006581	SRP54	100	99.206	Callithrix_jacchus
ENSSPUG00000013101	SRP54	100	99.206	ENSCAFG00000013331	SRP54	100	99.206	Canis_familiaris
ENSSPUG00000013101	SRP54	100	99.206	ENSCAFG00020023427	SRP54	100	99.206	Canis_lupus_dingo
ENSSPUG00000013101	SRP54	100	99.206	ENSCHIG00000026345	SRP54	100	99.206	Capra_hircus
ENSSPUG00000013101	SRP54	94	87.789	ENSTSYG00000035333	-	93	87.789	Carlito_syrichta
ENSSPUG00000013101	SRP54	100	99.008	ENSTSYG00000002680	-	100	99.008	Carlito_syrichta
ENSSPUG00000013101	SRP54	94	63.673	ENSCAPG00000008780	SRP54	100	63.673	Cavia_aperea
ENSSPUG00000013101	SRP54	100	98.810	ENSCPOG00000003691	SRP54	100	98.810	Cavia_porcellus
ENSSPUG00000013101	SRP54	90	98.810	ENSCCAG00000024179	SRP54	100	99.045	Cebus_capucinus
ENSSPUG00000013101	SRP54	100	99.206	ENSCATG00000034083	SRP54	100	99.206	Cercocebus_atys
ENSSPUG00000013101	SRP54	100	99.206	ENSCLAG00000015076	SRP54	100	99.206	Chinchilla_lanigera
ENSSPUG00000013101	SRP54	100	99.206	ENSCSAG00000015575	SRP54	100	99.206	Chlorocebus_sabaeus
ENSSPUG00000013101	SRP54	95	87.110	ENSCHOG00000008986	SRP54	100	87.110	Choloepus_hoffmanni
ENSSPUG00000013101	SRP54	100	100.000	ENSCPBG00000026195	SRP54	100	100.000	Chrysemys_picta_bellii
ENSSPUG00000013101	SRP54	100	81.746	ENSCING00000007380	-	100	81.746	Ciona_intestinalis
ENSSPUG00000013101	SRP54	100	99.206	ENSCANG00000028532	SRP54	100	99.206	Colobus_angolensis_palliatus
ENSSPUG00000013101	SRP54	100	98.810	ENSCGRG00001009525	-	100	98.810	Cricetulus_griseus_chok1gshd
ENSSPUG00000013101	SRP54	76	98.961	ENSCGRG00000009453	-	89	98.961	Cricetulus_griseus_crigri
ENSSPUG00000013101	SRP54	100	95.040	ENSCSEG00000012392	srp54	100	95.040	Cynoglossus_semilaevis
ENSSPUG00000013101	SRP54	100	95.833	ENSCVAG00000010395	srp54	100	95.833	Cyprinodon_variegatus
ENSSPUG00000013101	SRP54	100	96.032	ENSDARG00000098367	srp54	100	96.032	Danio_rerio
ENSSPUG00000013101	SRP54	100	99.206	ENSDNOG00000032525	SRP54	100	99.206	Dasypus_novemcinctus
ENSSPUG00000013101	SRP54	89	84.292	ENSDORG00000005159	-	98	84.292	Dipodomys_ordii
ENSSPUG00000013101	SRP54	96	77.526	FBgn0010747	Srp54k	98	77.108	Drosophila_melanogaster
ENSSPUG00000013101	SRP54	100	98.016	ENSETEG00000016307	-	100	98.016	Echinops_telfairi
ENSSPUG00000013101	SRP54	83	57.416	ENSETEG00000012102	-	99	57.416	Echinops_telfairi
ENSSPUG00000013101	SRP54	100	87.698	ENSEBUG00000009437	-	100	87.698	Eptatretus_burgeri
ENSSPUG00000013101	SRP54	100	99.206	ENSEASG00005002057	SRP54	100	99.206	Equus_asinus_asinus
ENSSPUG00000013101	SRP54	99	98.996	ENSECAG00000018042	SRP54	98	98.996	Equus_caballus
ENSSPUG00000013101	SRP54	100	82.540	ENSEEUG00000001511	SRP54	100	82.540	Erinaceus_europaeus
ENSSPUG00000013101	SRP54	100	95.238	ENSELUG00000003395	srp54	100	95.238	Esox_lucius
ENSSPUG00000013101	SRP54	100	99.008	ENSFCAG00000032033	SRP54	100	99.008	Felis_catus
ENSSPUG00000013101	SRP54	100	99.603	ENSFALG00000005995	SRP54	100	99.603	Ficedula_albicollis
ENSSPUG00000013101	SRP54	100	99.206	ENSFDAG00000016767	SRP54	100	99.206	Fukomys_damarensis
ENSSPUG00000013101	SRP54	100	95.437	ENSFHEG00000004263	srp54	100	95.437	Fundulus_heteroclitus
ENSSPUG00000013101	SRP54	95	90.167	ENSGMOG00000011391	srp54	100	90.167	Gadus_morhua
ENSSPUG00000013101	SRP54	100	99.603	ENSGALG00000023135	SRP54	100	99.603	Gallus_gallus
ENSSPUG00000013101	SRP54	100	96.032	ENSGAFG00000011586	srp54	100	96.032	Gambusia_affinis
ENSSPUG00000013101	SRP54	100	95.437	ENSGACG00000004181	srp54	100	95.437	Gasterosteus_aculeatus
ENSSPUG00000013101	SRP54	100	100.000	ENSGAGG00000014766	SRP54	100	100.000	Gopherus_agassizii
ENSSPUG00000013101	SRP54	100	99.206	ENSGGOG00000002926	SRP54	100	99.206	Gorilla_gorilla
ENSSPUG00000013101	SRP54	100	96.032	ENSHBUG00000005678	srp54	100	96.032	Haplochromis_burtoni
ENSSPUG00000013101	SRP54	100	99.206	ENSHGLG00000002850	SRP54	100	99.206	Heterocephalus_glaber_female
ENSSPUG00000013101	SRP54	100	99.206	ENSHGLG00100005263	SRP54	100	99.206	Heterocephalus_glaber_male
ENSSPUG00000013101	SRP54	100	68.317	ENSHGLG00100007281	-	100	68.317	Heterocephalus_glaber_male
ENSSPUG00000013101	SRP54	100	94.048	ENSHCOG00000021127	srp54	100	94.048	Hippocampus_comes
ENSSPUG00000013101	SRP54	100	95.635	ENSIPUG00000001420	srp54	100	95.635	Ictalurus_punctatus
ENSSPUG00000013101	SRP54	100	99.206	ENSSTOG00000016023	SRP54	100	99.206	Ictidomys_tridecemlineatus
ENSSPUG00000013101	SRP54	100	94.048	ENSJJAG00000013417	-	100	94.048	Jaculus_jaculus
ENSSPUG00000013101	SRP54	87	76.136	ENSJJAG00000016404	-	100	76.136	Jaculus_jaculus
ENSSPUG00000013101	SRP54	100	95.437	ENSKMAG00000007707	srp54	100	95.437	Kryptolebias_marmoratus
ENSSPUG00000013101	SRP54	100	95.833	ENSLBEG00000018690	srp54	100	95.833	Labrus_bergylta
ENSSPUG00000013101	SRP54	100	95.833	ENSLBEG00000021122	srp54	100	95.833	Labrus_bergylta
ENSSPUG00000013101	SRP54	100	96.032	ENSLACG00000017890	SRP54	100	96.032	Latimeria_chalumnae
ENSSPUG00000013101	SRP54	100	96.825	ENSLOCG00000009440	srp54	100	96.825	Lepisosteus_oculatus
ENSSPUG00000013101	SRP54	100	99.206	ENSLAFG00000012007	SRP54	100	99.206	Loxodonta_africana
ENSSPUG00000013101	SRP54	100	99.206	ENSMFAG00000044371	SRP54	100	99.206	Macaca_fascicularis
ENSSPUG00000013101	SRP54	100	99.206	ENSMMUG00000015073	FAM177A1	100	99.206	Macaca_mulatta
ENSSPUG00000013101	SRP54	100	99.206	ENSMNEG00000006947	SRP54	100	99.206	Macaca_nemestrina
ENSSPUG00000013101	SRP54	100	99.206	ENSMLEG00000042251	SRP54	100	99.206	Mandrillus_leucophaeus
ENSSPUG00000013101	SRP54	100	96.032	ENSMAMG00000004803	srp54	100	96.032	Mastacembelus_armatus
ENSSPUG00000013101	SRP54	100	96.032	ENSMZEG00005027528	srp54	100	96.032	Maylandia_zebra
ENSSPUG00000013101	SRP54	100	94.862	ENSMGAG00000012481	SRP54	100	94.862	Meleagris_gallopavo
ENSSPUG00000013101	SRP54	100	99.008	ENSMAUG00000014447	-	100	99.008	Mesocricetus_auratus
ENSSPUG00000013101	SRP54	100	99.206	ENSMICG00000010270	SRP54	100	99.206	Microcebus_murinus
ENSSPUG00000013101	SRP54	87	98.864	ENSMOCG00000000948	-	100	98.864	Microtus_ochrogaster
ENSSPUG00000013101	SRP54	90	92.731	ENSMMOG00000020303	srp54	99	92.731	Mola_mola
ENSSPUG00000013101	SRP54	100	99.008	ENSMODG00000012925	-	100	99.008	Monodelphis_domestica
ENSSPUG00000013101	SRP54	100	99.008	ENSMODG00000023150	-	100	99.008	Monodelphis_domestica
ENSSPUG00000013101	SRP54	88	95.034	ENSMALG00000009163	srp54	98	95.034	Monopterus_albus
ENSSPUG00000013101	SRP54	100	99.008	MGP_CAROLIEiJ_G0017754	-	100	99.008	Mus_caroli
ENSSPUG00000013101	SRP54	100	99.008	ENSMUSG00000073079	Srp54a	100	99.091	Mus_musculus
ENSSPUG00000013101	SRP54	100	98.214	ENSMUSG00000079108	Srp54c	100	98.214	Mus_musculus
ENSSPUG00000013101	SRP54	100	99.008	ENSMUSG00000112449	Srp54b	100	99.008	Mus_musculus
ENSSPUG00000013101	SRP54	100	99.008	MGP_PahariEiJ_G0029510	-	100	99.008	Mus_pahari
ENSSPUG00000013101	SRP54	100	99.206	ENSMPUG00000016302	SRP54	100	99.206	Mustela_putorius_furo
ENSSPUG00000013101	SRP54	100	98.611	ENSMLUG00000008958	SRP54	100	98.611	Myotis_lucifugus
ENSSPUG00000013101	SRP54	100	89.087	ENSNGAG00000019806	-	100	89.087	Nannospalax_galili
ENSSPUG00000013101	SRP54	87	95.682	ENSNBRG00000006000	srp54	100	95.682	Neolamprologus_brichardi
ENSSPUG00000013101	SRP54	100	99.206	ENSNLEG00000003496	SRP54	100	99.206	Nomascus_leucogenys
ENSSPUG00000013101	SRP54	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSSPUG00000013101	SRP54	58	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSSPUG00000013101	SRP54	100	99.206	ENSODEG00000004865	SRP54	100	99.206	Octodon_degus
ENSSPUG00000013101	SRP54	100	96.032	ENSONIG00000011768	srp54	100	96.032	Oreochromis_niloticus
ENSSPUG00000013101	SRP54	100	99.206	ENSOANG00000014051	SRP54	100	99.206	Ornithorhynchus_anatinus
ENSSPUG00000013101	SRP54	100	98.611	ENSOCUG00000007838	SRP54	100	98.611	Oryctolagus_cuniculus
ENSSPUG00000013101	SRP54	100	95.833	ENSORLG00000010027	srp54	100	95.833	Oryzias_latipes
ENSSPUG00000013101	SRP54	100	95.833	ENSORLG00020001878	srp54	100	95.833	Oryzias_latipes_hni
ENSSPUG00000013101	SRP54	100	95.833	ENSORLG00015021866	srp54	100	95.833	Oryzias_latipes_hsok
ENSSPUG00000013101	SRP54	100	95.635	ENSOMEG00000020952	srp54	100	95.635	Oryzias_melastigma
ENSSPUG00000013101	SRP54	100	99.206	ENSOGAG00000012188	SRP54	100	99.206	Otolemur_garnettii
ENSSPUG00000013101	SRP54	100	99.206	ENSOARG00000007160	SRP54	100	99.206	Ovis_aries
ENSSPUG00000013101	SRP54	100	99.206	ENSPPAG00000017434	SRP54	100	99.206	Pan_paniscus
ENSSPUG00000013101	SRP54	100	98.016	ENSPPRG00000014047	SRP54	100	98.016	Panthera_pardus
ENSSPUG00000013101	SRP54	100	99.008	ENSPTIG00000000744	SRP54	96	99.008	Panthera_tigris_altaica
ENSSPUG00000013101	SRP54	100	99.206	ENSPTRG00000006259	FAM177A1	100	99.206	Pan_troglodytes
ENSSPUG00000013101	SRP54	100	99.206	ENSPANG00000023853	SRP54	100	99.206	Papio_anubis
ENSSPUG00000013101	SRP54	100	95.635	ENSPKIG00000001953	srp54	100	95.635	Paramormyrops_kingsleyae
ENSSPUG00000013101	SRP54	100	99.802	ENSPSIG00000006476	SRP54	100	99.802	Pelodiscus_sinensis
ENSSPUG00000013101	SRP54	91	92.391	ENSPMGG00000004127	srp54	99	92.391	Periophthalmus_magnuspinnatus
ENSSPUG00000013101	SRP54	100	86.905	ENSPEMG00000019634	-	100	86.905	Peromyscus_maniculatus_bairdii
ENSSPUG00000013101	SRP54	100	88.889	ENSPMAG00000006078	-	100	88.889	Petromyzon_marinus
ENSSPUG00000013101	SRP54	100	99.008	ENSPCIG00000016175	SRP54	100	99.008	Phascolarctos_cinereus
ENSSPUG00000013101	SRP54	100	96.032	ENSPFOG00000008870	srp54	100	96.032	Poecilia_formosa
ENSSPUG00000013101	SRP54	100	96.032	ENSPLAG00000009889	srp54	100	96.032	Poecilia_latipinna
ENSSPUG00000013101	SRP54	100	96.032	ENSPMEG00000008601	srp54	100	96.032	Poecilia_mexicana
ENSSPUG00000013101	SRP54	100	96.032	ENSPREG00000004505	srp54	100	96.032	Poecilia_reticulata
ENSSPUG00000013101	SRP54	100	94.048	ENSPPYG00000005739	SRP54	100	94.048	Pongo_abelii
ENSSPUG00000013101	SRP54	100	95.040	ENSPCAG00000006268	SRP54	100	95.040	Procavia_capensis
ENSSPUG00000013101	SRP54	100	97.228	ENSPCOG00000022473	SRP54	100	97.228	Propithecus_coquereli
ENSSPUG00000013101	SRP54	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSSPUG00000013101	SRP54	100	96.032	ENSPNYG00000009717	srp54	100	96.032	Pundamilia_nyererei
ENSSPUG00000013101	SRP54	100	96.230	ENSPNAG00000008544	srp54	100	96.230	Pygocentrus_nattereri
ENSSPUG00000013101	SRP54	100	98.810	ENSRNOG00000032776	Srp54a	100	98.810	Rattus_norvegicus
ENSSPUG00000013101	SRP54	100	99.206	ENSRROG00000041292	SRP54	100	99.206	Rhinopithecus_roxellana
ENSSPUG00000013101	SRP54	86	53.061	YPR088C	SRP54	95	48.467	Saccharomyces_cerevisiae
ENSSPUG00000013101	SRP54	94	99.156	ENSSBOG00000035145	SRP54	100	99.156	Saimiri_boliviensis_boliviensis
ENSSPUG00000013101	SRP54	68	99.417	ENSSHAG00000000671	SRP54	100	99.417	Sarcophilus_harrisii
ENSSPUG00000013101	SRP54	100	96.230	ENSSFOG00015013920	srp54	100	96.230	Scleropages_formosus
ENSSPUG00000013101	SRP54	100	89.888	ENSSMAG00000002441	srp54	100	89.888	Scophthalmus_maximus
ENSSPUG00000013101	SRP54	100	95.635	ENSSDUG00000018586	srp54	100	95.635	Seriola_dumerili
ENSSPUG00000013101	SRP54	100	95.437	ENSSLDG00000010476	srp54	100	95.437	Seriola_lalandi_dorsalis
ENSSPUG00000013101	SRP54	100	99.206	ENSSARG00000002744	SRP54	100	99.206	Sorex_araneus
ENSSPUG00000013101	SRP54	100	95.833	ENSSPAG00000002354	srp54	100	95.833	Stegastes_partitus
ENSSPUG00000013101	SRP54	100	99.206	ENSSSCG00000001955	SRP54	100	99.206	Sus_scrofa
ENSSPUG00000013101	SRP54	94	99.578	ENSTGUG00000011945	-	95	99.578	Taeniopygia_guttata
ENSSPUG00000013101	SRP54	100	95.040	ENSTRUG00000007057	srp54	100	95.040	Takifugu_rubripes
ENSSPUG00000013101	SRP54	100	94.643	ENSTNIG00000002589	srp54	100	94.643	Tetraodon_nigroviridis
ENSSPUG00000013101	SRP54	89	90.604	ENSTBEG00000011409	SRP54	100	90.604	Tupaia_belangeri
ENSSPUG00000013101	SRP54	100	89.087	ENSTTRG00000000928	SRP54	100	89.087	Tursiops_truncatus
ENSSPUG00000013101	SRP54	52	99.237	ENSUAMG00000012385	SRP54	100	99.237	Ursus_americanus
ENSSPUG00000013101	SRP54	100	99.206	ENSUMAG00000011234	SRP54	100	99.206	Ursus_maritimus
ENSSPUG00000013101	SRP54	94	98.945	ENSVPAG00000005668	SRP54	100	98.945	Vicugna_pacos
ENSSPUG00000013101	SRP54	100	99.206	ENSVVUG00000019962	SRP54	100	99.206	Vulpes_vulpes
ENSSPUG00000013101	SRP54	100	82.249	ENSXETG00000012290	srp54	100	82.249	Xenopus_tropicalis
ENSSPUG00000013101	SRP54	88	95.485	ENSXCOG00000004658	srp54	96	95.485	Xiphophorus_couchianus
ENSSPUG00000013101	SRP54	100	96.032	ENSXMAG00000018315	srp54	100	96.032	Xiphophorus_maculatus