EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000013214 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 65191 bases
Position: chrQEPC01013498.1:535055-600245
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000017238	KH_1	PF00013.29	8.6e-53	1	3
ENSSPUP00000017238	KH_1	PF00013.29	8.6e-53	2	3
ENSSPUP00000017238	KH_1	PF00013.29	8.6e-53	3	3
ENSSPUP00000017255	KH_1	PF00013.29	4.6e-45	1	2
ENSSPUP00000017255	KH_1	PF00013.29	4.6e-45	2	2
ENSSPUP00000017267	KH_1	PF00013.29	7.7e-35	1	2
ENSSPUP00000017267	KH_1	PF00013.29	7.7e-35	2	2
ENSSPUP00000017238	KH_2	PF07650.17	6.6e-14	1	1
ENSSPUP00000017255	KH_2	PF07650.17	1.9e-11	1	1
ENSSPUP00000017267	KH_2	PF07650.17	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000018382	-	948	-	ENSSPUP00000017255	315 (aa)	-	-
ENSSPUT00000018364	-	1401	-	ENSSPUP00000017238	466 (aa)	-	-
ENSSPUT00000018394	-	651	-	ENSSPUP00000017267	216 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000013214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000013214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000013214	-	94	70.330	ENSSPUG00000000194	PCBP4	82	70.330
ENSSPUG00000013214	-	92	38.095	ENSSPUG00000013444	FUBP3	64	38.095
ENSSPUG00000013214	-	73	32.353	ENSSPUG00000016462	KHSRP	50	37.879
ENSSPUG00000013214	-	92	77.073	ENSSPUG00000006081	PCBP2	97	69.529
ENSSPUG00000013214	-	81	41.667	ENSSPUG00000003339	-	59	46.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000013214	-	92	82.131	ENSAPOG00000016582	-	95	77.810	Acanthochromis_polyacanthus
ENSSPUG00000013214	-	90	84.264	ENSAPOG00000020003	pcbp3	85	75.793	Acanthochromis_polyacanthus
ENSSPUG00000013214	-	90	86.935	ENSAMEG00000001697	-	93	82.392	Ailuropoda_melanoleuca
ENSSPUG00000013214	-	92	82.131	ENSACIG00000002739	-	95	77.681	Amphilophus_citrinellus
ENSSPUG00000013214	-	93	81.639	ENSACIG00000010933	pcbp3	93	89.011	Amphilophus_citrinellus
ENSSPUG00000013214	-	90	83.582	ENSAOCG00000008592	-	93	81.315	Amphiprion_ocellaris
ENSSPUG00000013214	-	91	79.000	ENSAOCG00000007806	-	95	79.000	Amphiprion_ocellaris
ENSSPUG00000013214	-	90	84.925	ENSAPEG00000005209	-	95	77.168	Amphiprion_percula
ENSSPUG00000013214	-	91	84.880	ENSAPEG00000008011	pcbp3	91	84.880	Amphiprion_percula
ENSSPUG00000013214	-	88	87.435	ENSATEG00000009833	-	95	77.616	Anabas_testudineus
ENSSPUG00000013214	-	91	85.467	ENSATEG00000015787	-	98	79.825	Anabas_testudineus
ENSSPUG00000013214	-	100	86.709	ENSAPLG00000008951	-	100	84.375	Anas_platyrhynchos
ENSSPUG00000013214	-	92	85.854	ENSAPLG00000002975	-	93	79.672	Anas_platyrhynchos
ENSSPUG00000013214	-	91	97.569	ENSACAG00000009819	-	92	97.569	Anolis_carolinensis
ENSSPUG00000013214	-	94	82.028	ENSACAG00000004607	-	93	82.524	Anolis_carolinensis
ENSSPUG00000013214	-	70	93.182	ENSANAG00000030702	-	91	93.182	Aotus_nancymaae
ENSSPUG00000013214	-	91	84.536	ENSACLG00000011835	pcbp3	91	84.536	Astatotilapia_calliptera
ENSSPUG00000013214	-	88	85.340	ENSACLG00000003801	-	92	80.756	Astatotilapia_calliptera
ENSSPUG00000013214	-	90	85.787	ENSAMXG00000013588	-	97	75.731	Astyanax_mexicanus
ENSSPUG00000013214	-	95	74.272	ENSAMXG00000001760	zgc:110045	100	67.304	Astyanax_mexicanus
ENSSPUG00000013214	-	91	86.505	ENSAMXG00000003440	pcbp3	91	86.505	Astyanax_mexicanus
ENSSPUG00000013214	-	90	86.935	ENSCAFG00020019472	-	84	80.184	Canis_lupus_dingo
ENSSPUG00000013214	-	90	86.935	ENSCSAG00000007440	-	84	83.045	Chlorocebus_sabaeus
ENSSPUG00000013214	-	92	85.854	ENSCPBG00000012151	-	86	85.854	Chrysemys_picta_bellii
ENSSPUG00000013214	-	100	93.446	ENSCPBG00000000733	-	100	96.629	Chrysemys_picta_bellii
ENSSPUG00000013214	-	88	84.293	ENSCSEG00000016984	-	92	71.429	Cynoglossus_semilaevis
ENSSPUG00000013214	-	90	83.756	ENSCSEG00000000822	pcbp3	96	76.023	Cynoglossus_semilaevis
ENSSPUG00000013214	-	92	82.927	ENSCVAG00000005262	-	97	81.443	Cyprinodon_variegatus
ENSSPUG00000013214	-	91	85.172	ENSCVAG00000014482	pcbp3	91	85.172	Cyprinodon_variegatus
ENSSPUG00000013214	-	91	86.851	ENSDARG00000054378	pcbp3	92	86.851	Danio_rerio
ENSSPUG00000013214	-	56	68.868	ENSDARG00000110961	zgc:110045	100	66.981	Danio_rerio
ENSSPUG00000013214	-	79	82.000	ENSETEG00000015988	-	97	68.466	Echinops_telfairi
ENSSPUG00000013214	-	91	68.621	ENSEBUG00000016192	pcbp3	99	68.621	Eptatretus_burgeri
ENSSPUG00000013214	-	96	75.166	ENSEBUG00000007485	-	89	74.178	Eptatretus_burgeri
ENSSPUG00000013214	-	88	67.857	ENSEBUG00000005495	pcbp3	73	56.897	Eptatretus_burgeri
ENSSPUG00000013214	-	91	85.517	ENSELUG00000003521	pcbp3	90	85.517	Esox_lucius
ENSSPUG00000013214	-	88	86.082	ENSELUG00000001560	-	94	74.438	Esox_lucius
ENSSPUG00000013214	-	100	91.176	ENSFALG00000004411	-	100	90.756	Ficedula_albicollis
ENSSPUG00000013214	-	92	85.854	ENSFALG00000003949	-	92	84.375	Ficedula_albicollis
ENSSPUG00000013214	-	92	83.415	ENSFHEG00000006539	-	97	76.420	Fundulus_heteroclitus
ENSSPUG00000013214	-	90	84.264	ENSFHEG00000016615	pcbp3	97	74.230	Fundulus_heteroclitus
ENSSPUG00000013214	-	92	60.127	ENSGMOG00000008611	-	98	57.143	Gadus_morhua
ENSSPUG00000013214	-	74	88.415	ENSGMOG00000011992	pcbp3	76	88.415	Gadus_morhua
ENSSPUG00000013214	-	91	99.306	ENSGALG00000013155	-	98	91.570	Gallus_gallus
ENSSPUG00000013214	-	94	82.791	ENSGALG00000004394	-	87	90.123	Gallus_gallus
ENSSPUG00000013214	-	90	84.080	ENSGAFG00000010274	-	98	74.105	Gambusia_affinis
ENSSPUG00000013214	-	100	79.430	ENSGAFG00000011430	pcbp3	94	77.746	Gambusia_affinis
ENSSPUG00000013214	-	88	85.128	ENSGACG00000002266	-	92	76.547	Gasterosteus_aculeatus
ENSSPUG00000013214	-	91	79.208	ENSGACG00000014955	-	93	72.581	Gasterosteus_aculeatus
ENSSPUG00000013214	-	90	91.579	ENSGAGG00000000271	-	100	92.708	Gopherus_agassizii
ENSSPUG00000013214	-	93	79.621	ENSGAGG00000006956	-	88	83.412	Gopherus_agassizii
ENSSPUG00000013214	-	88	85.340	ENSHBUG00000021782	-	92	80.756	Haplochromis_burtoni
ENSSPUG00000013214	-	91	84.828	ENSHBUG00000010697	pcbp3	91	84.828	Haplochromis_burtoni
ENSSPUG00000013214	-	91	85.467	ENSHCOG00000017868	pcbp3	91	85.467	Hippocampus_comes
ENSSPUG00000013214	-	84	88.710	ENSHCOG00000006067	-	91	88.710	Hippocampus_comes
ENSSPUG00000013214	-	91	86.851	ENSIPUG00000006238	pcbp3	92	86.851	Ictalurus_punctatus
ENSSPUG00000013214	-	52	75.824	ENSIPUG00000003914	zgc:110045	100	62.201	Ictalurus_punctatus
ENSSPUG00000013214	-	91	84.880	ENSKMAG00000003046	pcbp3	91	84.880	Kryptolebias_marmoratus
ENSSPUG00000013214	-	84	89.617	ENSKMAG00000018530	-	98	73.554	Kryptolebias_marmoratus
ENSSPUG00000013214	-	90	85.279	ENSLBEG00000006201	pcbp3	93	76.453	Labrus_bergylta
ENSSPUG00000013214	-	83	76.538	ENSLBEG00000006542	-	97	65.278	Labrus_bergylta
ENSSPUG00000013214	-	94	82.028	ENSLACG00000010386	pcbp3	79	78.457	Latimeria_chalumnae
ENSSPUG00000013214	-	100	91.350	ENSLACG00000010804	zgc:110045	100	91.561	Latimeria_chalumnae
ENSSPUG00000013214	-	100	87.975	ENSLOCG00000005058	zgc:110045	100	90.084	Lepisosteus_oculatus
ENSSPUG00000013214	-	91	87.543	ENSLOCG00000009369	pcbp3	93	87.543	Lepisosteus_oculatus
ENSSPUG00000013214	-	88	87.958	ENSMAMG00000011620	-	95	77.907	Mastacembelus_armatus
ENSSPUG00000013214	-	90	84.264	ENSMAMG00000022336	pcbp3	94	74.716	Mastacembelus_armatus
ENSSPUG00000013214	-	92	84.536	ENSMZEG00005008993	pcbp3	92	87.097	Maylandia_zebra
ENSSPUG00000013214	-	84	88.462	ENSMZEG00005014882	-	98	72.981	Maylandia_zebra
ENSSPUG00000013214	-	83	84.492	ENSMGAG00000001883	-	93	75.081	Meleagris_gallopavo
ENSSPUG00000013214	-	100	92.227	ENSMGAG00000006794	-	100	90.756	Meleagris_gallopavo
ENSSPUG00000013214	-	91	81.597	ENSMMOG00000000730	pcbp3	86	74.074	Mola_mola
ENSSPUG00000013214	-	90	84.264	ENSMMOG00000005216	-	95	76.453	Mola_mola
ENSSPUG00000013214	-	75	77.570	ENSMODG00000027884	-	93	77.570	Monodelphis_domestica
ENSSPUG00000013214	-	91	85.121	ENSMALG00000000691	pcbp3	95	86.170	Monopterus_albus
ENSSPUG00000013214	-	90	83.077	ENSMPUG00000001779	-	89	70.652	Mustela_putorius_furo
ENSSPUG00000013214	-	91	85.417	ENSNBRG00000016409	-	98	77.159	Neolamprologus_brichardi
ENSSPUG00000013214	-	91	81.973	ENSNBRG00000016714	-	98	75.000	Neolamprologus_brichardi
ENSSPUG00000013214	-	94	83.099	ENSOPRG00000003431	-	99	77.049	Ochotona_princeps
ENSSPUG00000013214	-	90	83.085	ENSONIG00000004611	-	92	80.756	Oreochromis_niloticus
ENSSPUG00000013214	-	92	79.343	ENSONIG00000012122	-	93	79.870	Oreochromis_niloticus
ENSSPUG00000013214	-	92	85.366	ENSOCUG00000002696	-	88	82.759	Oryctolagus_cuniculus
ENSSPUG00000013214	-	90	84.080	ENSORLG00000022739	-	92	81.443	Oryzias_latipes
ENSSPUG00000013214	-	90	83.582	ENSORLG00000000059	pcbp3	95	81.315	Oryzias_latipes
ENSSPUG00000013214	-	88	85.128	ENSORLG00020012671	pcbp3	93	80.756	Oryzias_latipes_hni
ENSSPUG00000013214	-	90	84.264	ENSORLG00020006124	-	92	82.007	Oryzias_latipes_hni
ENSSPUG00000013214	-	90	84.080	ENSORLG00015008051	-	98	74.451	Oryzias_latipes_hsok
ENSSPUG00000013214	-	88	85.128	ENSORLG00015000429	pcbp3	93	80.756	Oryzias_latipes_hsok
ENSSPUG00000013214	-	92	80.756	ENSOMEG00000020811	pcbp3	93	80.756	Oryzias_melastigma
ENSSPUG00000013214	-	90	84.772	ENSOMEG00000020162	-	92	82.007	Oryzias_melastigma
ENSSPUG00000013214	-	86	88.144	ENSOGAG00000008044	-	93	78.025	Otolemur_garnettii
ENSSPUG00000013214	-	96	82.192	ENSPKIG00000020913	-	95	86.977	Paramormyrops_kingsleyae
ENSSPUG00000013214	-	90	86.294	ENSPKIG00000019329	pcbp3	90	82.986	Paramormyrops_kingsleyae
ENSSPUG00000013214	-	92	72.195	ENSPSIG00000014970	-	97	67.209	Pelodiscus_sinensis
ENSSPUG00000013214	-	77	99.588	ENSPSIG00000008350	-	100	92.969	Pelodiscus_sinensis
ENSSPUG00000013214	-	91	85.069	ENSPMGG00000022383	pcbp3	91	85.069	Periophthalmus_magnuspinnatus
ENSSPUG00000013214	-	91	68.601	ENSPMAG00000004551	pcbp3	84	69.036	Petromyzon_marinus
ENSSPUG00000013214	-	86	87.368	ENSPMAG00000004637	-	99	87.500	Petromyzon_marinus
ENSSPUG00000013214	-	96	84.906	ENSPCIG00000028092	-	93	87.889	Phascolarctos_cinereus
ENSSPUG00000013214	-	88	86.387	ENSPLAG00000004074	-	89	74.230	Poecilia_latipinna
ENSSPUG00000013214	-	91	80.719	ENSPLAG00000011449	pcbp3	89	73.585	Poecilia_latipinna
ENSSPUG00000013214	-	84	89.560	ENSPMEG00000006653	-	94	86.842	Poecilia_mexicana
ENSSPUG00000013214	-	91	85.172	ENSPMEG00000021239	pcbp3	98	75.956	Poecilia_mexicana
ENSSPUG00000013214	-	90	84.772	ENSPREG00000020585	-	90	84.080	Poecilia_reticulata
ENSSPUG00000013214	-	91	81.315	ENSPREG00000015736	pcbp3	98	74.493	Poecilia_reticulata
ENSSPUG00000013214	-	90	82.587	ENSPNYG00000012326	pcbp3	94	74.857	Pundamilia_nyererei
ENSSPUG00000013214	-	88	85.340	ENSPNYG00000013205	-	95	76.453	Pundamilia_nyererei
ENSSPUG00000013214	-	50	80.220	ENSPNAG00000006838	zgc:110045	100	67.143	Pygocentrus_nattereri
ENSSPUG00000013214	-	90	84.080	ENSPNAG00000015104	pcbp3	92	81.443	Pygocentrus_nattereri
ENSSPUG00000013214	-	90	86.294	ENSPNAG00000008541	-	91	84.775	Pygocentrus_nattereri
ENSSPUG00000013214	-	92	85.366	ENSRNOG00000001245	Pcbp3	92	83.045	Rattus_norvegicus
ENSSPUG00000013214	-	92	76.351	ENSRBIG00000028177	-	97	69.531	Rhinopithecus_bieti
ENSSPUG00000013214	-	92	85.854	ENSSHAG00000007890	-	95	79.299	Sarcophilus_harrisii
ENSSPUG00000013214	-	94	85.577	ENSSFOG00015007118	-	95	77.904	Scleropages_formosus
ENSSPUG00000013214	-	91	85.764	ENSSFOG00015014706	pcbp3	91	85.764	Scleropages_formosus
ENSSPUG00000013214	-	92	86.552	ENSSFOG00015010205	pcbp3	98	80.347	Scleropages_formosus
ENSSPUG00000013214	-	90	85.354	ENSSMAG00000003135	-	92	81.100	Scophthalmus_maximus
ENSSPUG00000013214	-	90	84.264	ENSSMAG00000011929	pcbp3	95	76.316	Scophthalmus_maximus
ENSSPUG00000013214	-	91	85.500	ENSSDUG00000008502	-	91	84.653	Seriola_dumerili
ENSSPUG00000013214	-	91	85.172	ENSSDUG00000011608	pcbp3	96	79.360	Seriola_dumerili
ENSSPUG00000013214	-	91	85.172	ENSSLDG00000008518	pcbp3	96	79.360	Seriola_lalandi_dorsalis
ENSSPUG00000013214	-	90	84.080	ENSSLDG00000020161	-	98	74.380	Seriola_lalandi_dorsalis
ENSSPUG00000013214	-	91	79.000	ENSSPAG00000004190	-	95	79.000	Stegastes_partitus
ENSSPUG00000013214	-	91	72.318	ENSSPAG00000023341	-	98	66.667	Stegastes_partitus
ENSSPUG00000013214	-	92	80.288	ENSTGUG00000003316	-	97	70.933	Taeniopygia_guttata
ENSSPUG00000013214	-	92	89.756	ENSTGUG00000008158	-	93	90.657	Taeniopygia_guttata
ENSSPUG00000013214	-	93	82.439	ENSTRUG00000013604	pcbp3	98	75.967	Takifugu_rubripes
ENSSPUG00000013214	-	92	81.100	ENSTRUG00000006280	-	85	81.100	Takifugu_rubripes
ENSSPUG00000013214	-	86	90.000	ENSTTRG00000015075	-	93	81.169	Tursiops_truncatus
ENSSPUG00000013214	-	95	87.033	ENSXETG00000010491	pcbp2	100	89.011	Xenopus_tropicalis
ENSSPUG00000013214	-	92	86.341	ENSXETG00000011483	pcbp1	93	78.317	Xenopus_tropicalis
ENSSPUG00000013214	-	91	85.121	ENSXCOG00000020481	pcbp3	98	75.956	Xiphophorus_couchianus
ENSSPUG00000013214	-	90	84.080	ENSXMAG00000028711	-	95	77.937	Xiphophorus_maculatus
ENSSPUG00000013214	-	91	84.880	ENSXMAG00000008175	pcbp3	91	84.880	Xiphophorus_maculatus