EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000013259 (Gene tree)
Gene ID: -
Gene Symbol: PRPF38A
Alias: FLJ14936|Prp38
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 7379 bases
Position: chrQEPC01013865.1:10915579-10922957
Accession: 25930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000017128	PRP38	PF03371.15	1.1e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000018250	PRPF38A-201	1191	-	ENSSPUP00000017128	312 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000013259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000013259's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000013259	PRPF38A	100	96.154	ENSG00000134748	PRPF38A	100	96.154	Homo_sapiens
ENSSPUG00000013259	PRPF38A	71	88.235	ENSAPOG00000011652	prpf38a	100	81.470	Acanthochromis_polyacanthus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSAMEG00000009319	PRPF38A	100	96.154	Ailuropoda_melanoleuca
ENSSPUG00000013259	PRPF38A	71	86.425	ENSACIG00000012292	prpf38a	76	85.714	Amphilophus_citrinellus
ENSSPUG00000013259	PRPF38A	71	88.235	ENSAOCG00000018004	prpf38a	100	81.470	Amphiprion_ocellaris
ENSSPUG00000013259	PRPF38A	71	88.235	ENSAPEG00000021414	prpf38a	100	81.470	Amphiprion_percula
ENSSPUG00000013259	PRPF38A	71	86.878	ENSATEG00000004608	prpf38a	100	80.192	Anabas_testudineus
ENSSPUG00000013259	PRPF38A	79	96.356	ENSAPLG00000005827	PRPF38A	99	96.356	Anas_platyrhynchos
ENSSPUG00000013259	PRPF38A	100	96.795	ENSACAG00000008249	PRPF38A	100	96.795	Anolis_carolinensis
ENSSPUG00000013259	PRPF38A	100	64.557	ENSANAG00000029204	-	100	59.494	Aotus_nancymaae
ENSSPUG00000013259	PRPF38A	100	96.154	ENSANAG00000027839	PRPF38A	100	96.154	Aotus_nancymaae
ENSSPUG00000013259	PRPF38A	71	89.140	ENSACLG00000021595	prpf38a	100	82.109	Astatotilapia_calliptera
ENSSPUG00000013259	PRPF38A	100	81.150	ENSAMXG00000029274	prpf38a	100	81.150	Astyanax_mexicanus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSBTAG00000002720	PRPF38A	100	96.154	Bos_taurus
ENSSPUG00000013259	PRPF38A	63	62.564	WBGene00008380	prp-38	68	59.817	Caenorhabditis_elegans
ENSSPUG00000013259	PRPF38A	100	96.154	ENSCJAG00000021594	PRPF38A	100	96.154	Callithrix_jacchus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSCAFG00000003740	PRPF38A	100	96.154	Canis_familiaris
ENSSPUG00000013259	PRPF38A	100	96.154	ENSCAFG00020010939	PRPF38A	100	96.154	Canis_lupus_dingo
ENSSPUG00000013259	PRPF38A	100	96.154	ENSCHIG00000024730	PRPF38A	100	96.154	Capra_hircus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSTSYG00000009868	-	100	96.154	Carlito_syrichta
ENSSPUG00000013259	PRPF38A	86	94.424	ENSTSYG00000031994	-	95	94.424	Carlito_syrichta
ENSSPUG00000013259	PRPF38A	100	96.154	ENSCPOG00000005079	PRPF38A	100	96.154	Cavia_porcellus
ENSSPUG00000013259	PRPF38A	100	95.192	ENSCCAG00000026502	PRPF38A	100	95.192	Cebus_capucinus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSCATG00000032296	PRPF38A	100	96.154	Cercocebus_atys
ENSSPUG00000013259	PRPF38A	100	62.500	ENSCATG00000044190	-	100	61.218	Cercocebus_atys
ENSSPUG00000013259	PRPF38A	100	96.154	ENSCLAG00000005816	PRPF38A	100	96.154	Chinchilla_lanigera
ENSSPUG00000013259	PRPF38A	78	96.875	ENSCHOG00000008388	PRPF38A	77	96.875	Choloepus_hoffmanni
ENSSPUG00000013259	PRPF38A	100	96.795	ENSCPBG00000014791	PRPF38A	100	96.795	Chrysemys_picta_bellii
ENSSPUG00000013259	PRPF38A	68	71.171	ENSCSAVG00000009580	-	78	67.373	Ciona_savignyi
ENSSPUG00000013259	PRPF38A	74	95.238	ENSCANG00000032608	PRPF38A	77	95.238	Colobus_angolensis_palliatus
ENSSPUG00000013259	PRPF38A	100	95.833	ENSCGRG00001018502	-	100	95.833	Cricetulus_griseus_chok1gshd
ENSSPUG00000013259	PRPF38A	74	80.087	ENSCGRG00001002557	-	77	80.702	Cricetulus_griseus_chok1gshd
ENSSPUG00000013259	PRPF38A	100	95.833	ENSCGRG00000014868	Prpf38a	100	95.833	Cricetulus_griseus_crigri
ENSSPUG00000013259	PRPF38A	71	87.330	ENSCSEG00000001269	prpf38a	79	86.580	Cynoglossus_semilaevis
ENSSPUG00000013259	PRPF38A	71	88.235	ENSCVAG00000012305	prpf38a	100	80.831	Cyprinodon_variegatus
ENSSPUG00000013259	PRPF38A	100	80.831	ENSDARG00000039213	prpf38a	100	80.831	Danio_rerio
ENSSPUG00000013259	PRPF38A	100	96.154	ENSDNOG00000042326	PRPF38A	100	96.154	Dasypus_novemcinctus
ENSSPUG00000013259	PRPF38A	100	82.692	ENSDORG00000023857	-	100	82.692	Dipodomys_ordii
ENSSPUG00000013259	PRPF38A	84	78.707	ENSDORG00000023691	-	78	83.700	Dipodomys_ordii
ENSSPUG00000013259	PRPF38A	84	78.707	ENSDORG00000025371	-	78	83.700	Dipodomys_ordii
ENSSPUG00000013259	PRPF38A	64	72.637	FBgn0050342	Prp38	57	74.468	Drosophila_melanogaster
ENSSPUG00000013259	PRPF38A	76	79.412	ENSEBUG00000012588	prpf38a	75	79.399	Eptatretus_burgeri
ENSSPUG00000013259	PRPF38A	100	96.154	ENSEASG00005014427	PRPF38A	100	96.154	Equus_asinus_asinus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSECAG00000022628	PRPF38A	100	96.154	Equus_caballus
ENSSPUG00000013259	PRPF38A	71	85.973	ENSELUG00000021094	prpf38a	100	79.872	Esox_lucius
ENSSPUG00000013259	PRPF38A	100	96.154	ENSFCAG00000002518	PRPF38A	100	96.154	Felis_catus
ENSSPUG00000013259	PRPF38A	99	83.601	ENSFALG00000003612	-	77	88.312	Ficedula_albicollis
ENSSPUG00000013259	PRPF38A	87	95.572	ENSFALG00000005598	-	100	95.572	Ficedula_albicollis
ENSSPUG00000013259	PRPF38A	100	95.833	ENSFDAG00000011287	PRPF38A	100	95.833	Fukomys_damarensis
ENSSPUG00000013259	PRPF38A	84	78.409	ENSFHEG00000014317	prpf38a	78	86.580	Fundulus_heteroclitus
ENSSPUG00000013259	PRPF38A	53	93.976	ENSGMOG00000011384	prpf38a	54	93.976	Gadus_morhua
ENSSPUG00000013259	PRPF38A	100	96.474	ENSGALG00000010627	PRPF38A	100	96.474	Gallus_gallus
ENSSPUG00000013259	PRPF38A	71	88.235	ENSGAFG00000012422	prpf38a	100	80.831	Gambusia_affinis
ENSSPUG00000013259	PRPF38A	71	86.099	ENSGACG00000005423	prpf38a	100	79.683	Gasterosteus_aculeatus
ENSSPUG00000013259	PRPF38A	100	96.474	ENSGAGG00000020547	PRPF38A	100	96.474	Gopherus_agassizii
ENSSPUG00000013259	PRPF38A	100	96.154	ENSGGOG00000003940	PRPF38A	100	96.154	Gorilla_gorilla
ENSSPUG00000013259	PRPF38A	61	93.122	ENSHBUG00000020572	prpf38a	80	93.085	Haplochromis_burtoni
ENSSPUG00000013259	PRPF38A	100	96.154	ENSHGLG00000000475	PRPF38A	100	96.154	Heterocephalus_glaber_female
ENSSPUG00000013259	PRPF38A	100	81.410	ENSHGLG00000007918	-	100	79.808	Heterocephalus_glaber_female
ENSSPUG00000013259	PRPF38A	100	81.410	ENSHGLG00100003928	-	100	79.808	Heterocephalus_glaber_male
ENSSPUG00000013259	PRPF38A	100	96.154	ENSHGLG00100008935	PRPF38A	100	96.154	Heterocephalus_glaber_male
ENSSPUG00000013259	PRPF38A	84	71.642	ENSHCOG00000020781	prpf38a	72	80.435	Hippocampus_comes
ENSSPUG00000013259	PRPF38A	84	76.336	ENSIPUG00000005757	prpf38a	75	84.483	Ictalurus_punctatus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSSTOG00000015610	PRPF38A	100	96.154	Ictidomys_tridecemlineatus
ENSSPUG00000013259	PRPF38A	100	95.513	ENSJJAG00000015811	Prpf38a	100	95.513	Jaculus_jaculus
ENSSPUG00000013259	PRPF38A	71	88.235	ENSKMAG00000006588	prpf38a	100	80.831	Kryptolebias_marmoratus
ENSSPUG00000013259	PRPF38A	96	78.859	ENSLBEG00000020585	prpf38a	100	79.233	Labrus_bergylta
ENSSPUG00000013259	PRPF38A	100	92.628	ENSLACG00000011495	PRPF38A	100	92.628	Latimeria_chalumnae
ENSSPUG00000013259	PRPF38A	100	79.872	ENSLOCG00000006262	prpf38a	100	79.233	Lepisosteus_oculatus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSLAFG00000025862	PRPF38A	100	96.154	Loxodonta_africana
ENSSPUG00000013259	PRPF38A	100	96.154	ENSMFAG00000039449	PRPF38A	100	96.154	Macaca_fascicularis
ENSSPUG00000013259	PRPF38A	87	95.203	ENSMMUG00000014333	PRPF38A	98	94.853	Macaca_mulatta
ENSSPUG00000013259	PRPF38A	100	62.179	ENSMNEG00000040242	-	100	61.218	Macaca_nemestrina
ENSSPUG00000013259	PRPF38A	100	96.154	ENSMNEG00000031221	PRPF38A	100	96.154	Macaca_nemestrina
ENSSPUG00000013259	PRPF38A	100	96.154	ENSMLEG00000041105	PRPF38A	100	96.154	Mandrillus_leucophaeus
ENSSPUG00000013259	PRPF38A	71	88.688	ENSMAMG00000015431	prpf38a	100	81.789	Mastacembelus_armatus
ENSSPUG00000013259	PRPF38A	71	89.140	ENSMZEG00005017838	prpf38a	100	82.109	Maylandia_zebra
ENSSPUG00000013259	PRPF38A	74	95.238	ENSMGAG00000011176	PRPF38A	77	95.238	Meleagris_gallopavo
ENSSPUG00000013259	PRPF38A	85	90.530	ENSMAUG00000018029	-	87	90.043	Mesocricetus_auratus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSMICG00000014193	PRPF38A	100	96.154	Microcebus_murinus
ENSSPUG00000013259	PRPF38A	100	95.833	ENSMOCG00000013080	Prpf38a	100	95.833	Microtus_ochrogaster
ENSSPUG00000013259	PRPF38A	83	82.558	ENSMMOG00000016972	prpf38a	81	86.580	Mola_mola
ENSSPUG00000013259	PRPF38A	100	97.125	ENSMODG00000000644	PRPF38A	100	97.125	Monodelphis_domestica
ENSSPUG00000013259	PRPF38A	71	87.783	ENSMALG00000019363	prpf38a	97	81.150	Monopterus_albus
ENSSPUG00000013259	PRPF38A	100	94.872	MGP_CAROLIEiJ_G0026269	Prpf38a	100	94.872	Mus_caroli
ENSSPUG00000013259	PRPF38A	100	94.872	ENSMUSG00000063800	Prpf38a	100	94.872	Mus_musculus
ENSSPUG00000013259	PRPF38A	100	94.872	MGP_PahariEiJ_G0028602	Prpf38a	100	94.872	Mus_pahari
ENSSPUG00000013259	PRPF38A	100	94.551	MGP_SPRETEiJ_G0027238	Prpf38a	100	94.551	Mus_spretus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSMPUG00000006896	PRPF38A	100	96.154	Mustela_putorius_furo
ENSSPUG00000013259	PRPF38A	100	95.833	ENSNGAG00000011884	Prpf38a	100	95.833	Nannospalax_galili
ENSSPUG00000013259	PRPF38A	71	87.783	ENSNBRG00000004013	prpf38a	74	87.013	Neolamprologus_brichardi
ENSSPUG00000013259	PRPF38A	100	64.423	ENSNLEG00000033398	-	94	64.423	Nomascus_leucogenys
ENSSPUG00000013259	PRPF38A	97	70.530	ENSNLEG00000012592	-	99	70.530	Nomascus_leucogenys
ENSSPUG00000013259	PRPF38A	93	95.848	ENSNLEG00000017999	PRPF38A	93	95.848	Nomascus_leucogenys
ENSSPUG00000013259	PRPF38A	100	92.949	ENSMEUG00000003860	PRPF38A	100	92.949	Notamacropus_eugenii
ENSSPUG00000013259	PRPF38A	73	95.175	ENSOPRG00000008985	PRPF38A	96	94.805	Ochotona_princeps
ENSSPUG00000013259	PRPF38A	100	96.154	ENSODEG00000005869	PRPF38A	100	96.154	Octodon_degus
ENSSPUG00000013259	PRPF38A	71	88.235	ENSONIG00000007816	prpf38a	100	81.470	Oreochromis_niloticus
ENSSPUG00000013259	PRPF38A	100	63.694	ENSOANG00000009541	-	100	63.694	Ornithorhynchus_anatinus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSOCUG00000000963	PRPF38A	100	96.154	Oryctolagus_cuniculus
ENSSPUG00000013259	PRPF38A	96	80.000	ENSORLG00000013485	prpf38a	99	80.128	Oryzias_latipes
ENSSPUG00000013259	PRPF38A	96	80.000	ENSORLG00020002130	prpf38a	99	80.128	Oryzias_latipes_hni
ENSSPUG00000013259	PRPF38A	96	79.667	ENSORLG00015021393	prpf38a	99	79.808	Oryzias_latipes_hsok
ENSSPUG00000013259	PRPF38A	96	79.530	ENSOMEG00000016333	prpf38a	100	79.553	Oryzias_melastigma
ENSSPUG00000013259	PRPF38A	100	96.154	ENSOGAG00000005423	PRPF38A	100	96.154	Otolemur_garnettii
ENSSPUG00000013259	PRPF38A	100	96.154	ENSOARG00000005373	PRPF38A	100	96.154	Ovis_aries
ENSSPUG00000013259	PRPF38A	100	74.038	ENSPPAG00000033867	-	100	74.038	Pan_paniscus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSPPAG00000030905	PRPF38A	100	96.154	Pan_paniscus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSPPRG00000013268	PRPF38A	100	96.154	Panthera_pardus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSPTIG00000015419	PRPF38A	100	96.154	Panthera_tigris_altaica
ENSSPUG00000013259	PRPF38A	100	96.154	ENSPTRG00000000739	PRPF38A	100	96.154	Pan_troglodytes
ENSSPUG00000013259	PRPF38A	100	96.154	ENSPANG00000015483	PRPF38A	100	96.154	Papio_anubis
ENSSPUG00000013259	PRPF38A	100	79.808	ENSPKIG00000011439	prpf38a	100	79.487	Paramormyrops_kingsleyae
ENSSPUG00000013259	PRPF38A	100	97.115	ENSPSIG00000017487	PRPF38A	100	97.115	Pelodiscus_sinensis
ENSSPUG00000013259	PRPF38A	81	79.134	ENSPMGG00000021352	prpf38a	99	77.346	Periophthalmus_magnuspinnatus
ENSSPUG00000013259	PRPF38A	100	95.833	ENSPEMG00000023277	-	100	95.833	Peromyscus_maniculatus_bairdii
ENSSPUG00000013259	PRPF38A	100	88.889	ENSPEMG00000011212	-	100	87.937	Peromyscus_maniculatus_bairdii
ENSSPUG00000013259	PRPF38A	100	96.805	ENSPCIG00000022369	-	100	96.805	Phascolarctos_cinereus
ENSSPUG00000013259	PRPF38A	83	79.537	ENSPFOG00000004248	prpf38a	100	80.831	Poecilia_formosa
ENSSPUG00000013259	PRPF38A	92	74.830	ENSPLAG00000010328	prpf38a	100	80.831	Poecilia_latipinna
ENSSPUG00000013259	PRPF38A	84	77.154	ENSPMEG00000011804	prpf38a	100	80.831	Poecilia_mexicana
ENSSPUG00000013259	PRPF38A	95	71.010	ENSPREG00000002835	prpf38a	58	92.021	Poecilia_reticulata
ENSSPUG00000013259	PRPF38A	100	87.697	ENSPPYG00000001348	PRPF38A	100	87.697	Pongo_abelii
ENSSPUG00000013259	PRPF38A	100	96.154	ENSPCAG00000013328	PRPF38A	100	96.154	Procavia_capensis
ENSSPUG00000013259	PRPF38A	100	74.679	ENSPCOG00000020709	-	76	78.788	Propithecus_coquereli
ENSSPUG00000013259	PRPF38A	100	96.154	ENSPCOG00000016387	-	100	96.154	Propithecus_coquereli
ENSSPUG00000013259	PRPF38A	100	96.154	ENSPVAG00000009803	PRPF38A	100	96.154	Pteropus_vampyrus
ENSSPUG00000013259	PRPF38A	71	89.140	ENSPNYG00000005571	prpf38a	100	82.109	Pundamilia_nyererei
ENSSPUG00000013259	PRPF38A	100	81.789	ENSPNAG00000010399	prpf38a	100	81.789	Pygocentrus_nattereri
ENSSPUG00000013259	PRPF38A	100	95.513	ENSRNOG00000009451	Prpf38a	100	95.513	Rattus_norvegicus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSRBIG00000036442	PRPF38A	100	96.154	Rhinopithecus_bieti
ENSSPUG00000013259	PRPF38A	100	60.256	ENSRBIG00000034053	-	57	74.126	Rhinopithecus_bieti
ENSSPUG00000013259	PRPF38A	100	96.154	ENSRROG00000032788	PRPF38A	100	96.154	Rhinopithecus_roxellana
ENSSPUG00000013259	PRPF38A	100	61.218	ENSRROG00000034606	-	100	58.013	Rhinopithecus_roxellana
ENSSPUG00000013259	PRPF38A	98	75.490	ENSRROG00000040003	-	99	75.490	Rhinopithecus_roxellana
ENSSPUG00000013259	PRPF38A	100	96.154	ENSSBOG00000019515	PRPF38A	100	96.154	Saimiri_boliviensis_boliviensis
ENSSPUG00000013259	PRPF38A	87	96.310	ENSSHAG00000006906	-	100	96.310	Sarcophilus_harrisii
ENSSPUG00000013259	PRPF38A	96	69.536	ENSSHAG00000006029	-	74	79.638	Sarcophilus_harrisii
ENSSPUG00000013259	PRPF38A	100	80.831	ENSSFOG00015013572	prpf38a	100	79.872	Scleropages_formosus
ENSSPUG00000013259	PRPF38A	71	87.330	ENSSMAG00000015379	prpf38a	75	86.580	Scophthalmus_maximus
ENSSPUG00000013259	PRPF38A	71	87.783	ENSSDUG00000001324	prpf38a	100	81.150	Seriola_dumerili
ENSSPUG00000013259	PRPF38A	71	87.783	ENSSLDG00000014803	prpf38a	100	81.150	Seriola_lalandi_dorsalis
ENSSPUG00000013259	PRPF38A	100	79.167	ENSSARG00000014458	PRPF38A	100	79.167	Sorex_araneus
ENSSPUG00000013259	PRPF38A	71	70.136	ENSSPAG00000010449	prpf38a	100	63.782	Stegastes_partitus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSSSCG00000028288	PRPF38A	100	96.154	Sus_scrofa
ENSSPUG00000013259	PRPF38A	100	92.628	ENSTGUG00000008995	PRPF38A	100	92.628	Taeniopygia_guttata
ENSSPUG00000013259	PRPF38A	71	86.425	ENSTRUG00000003374	prpf38a	71	85.714	Takifugu_rubripes
ENSSPUG00000013259	PRPF38A	71	84.305	ENSTNIG00000005533	prpf38a	100	78.413	Tetraodon_nigroviridis
ENSSPUG00000013259	PRPF38A	100	95.513	ENSTBEG00000000725	PRPF38A	100	95.513	Tupaia_belangeri
ENSSPUG00000013259	PRPF38A	100	96.154	ENSTTRG00000016139	PRPF38A	100	96.154	Tursiops_truncatus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSUAMG00000000625	PRPF38A	100	96.154	Ursus_americanus
ENSSPUG00000013259	PRPF38A	100	96.154	ENSUMAG00000022674	PRPF38A	100	96.154	Ursus_maritimus
ENSSPUG00000013259	PRPF38A	74	94.805	ENSVPAG00000000907	PRPF38A	100	90.385	Vicugna_pacos
ENSSPUG00000013259	PRPF38A	100	96.154	ENSVVUG00000004475	PRPF38A	100	96.154	Vulpes_vulpes
ENSSPUG00000013259	PRPF38A	100	84.026	ENSXETG00000008060	prpf38a	100	87.859	Xenopus_tropicalis
ENSSPUG00000013259	PRPF38A	71	86.099	ENSXCOG00000007393	prpf38a	77	85.408	Xiphophorus_couchianus
ENSSPUG00000013259	PRPF38A	71	88.235	ENSXMAG00000026143	prpf38a	100	80.831	Xiphophorus_maculatus