EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000013358 (Gene tree)
Gene ID: -
Gene Symbol: ZC3H13
Alias: DKFZp434D1812|KIAA0853|Xio
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 96806 bases
Position: chrQEPC01002071.1:375976-472781
Accession: 20368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000017320	zf-CCCH	PF00642.24	5e-07	1	1
ENSSPUP00000017313	zf-CCCH	PF00642.24	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000018441	ZC3H13-201	4623	-	ENSSPUP00000017313	1540 (aa)	-	-
ENSSPUT00000018449	ZC3H13-202	4491	-	ENSSPUP00000017320	1496 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000013358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000013358's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000013358	ZC3H13	58	82.362	ENSAMEG00000013117	ZC3H13	53	82.209	Ailuropoda_melanoleuca
ENSSPUG00000013358	ZC3H13	63	82.822	ENSTSYG00000000992	ZC3H13	65	82.669	Carlito_syrichta
ENSSPUG00000013358	ZC3H13	51	93.805	ENSCHOG00000009724	ZC3H13	50	93.805	Choloepus_hoffmanni
ENSSPUG00000013358	ZC3H13	58	63.054	ENSCSEG00000010275	zc3h13	56	60.714	Cynoglossus_semilaevis
ENSSPUG00000013358	ZC3H13	60	63.362	ENSDARG00000037177	zc3h13	56	63.362	Danio_rerio
ENSSPUG00000013358	ZC3H13	62	82.126	ENSDNOG00000005390	ZC3H13	53	81.972	Dasypus_novemcinctus
ENSSPUG00000013358	ZC3H13	58	82.669	ENSEASG00005017100	ZC3H13	53	82.515	Equus_asinus_asinus
ENSSPUG00000013358	ZC3H13	60	80.687	ENSFDAG00000012323	ZC3H13	52	80.687	Fukomys_damarensis
ENSSPUG00000013358	ZC3H13	56	61.135	ENSGACG00000015166	zc3h13	55	58.264	Gasterosteus_aculeatus
ENSSPUG00000013358	ZC3H13	59	81.748	ENSHGLG00100007460	ZC3H13	53	80.258	Heterocephalus_glaber_male
ENSSPUG00000013358	ZC3H13	60	63.082	ENSKMAG00000010701	zc3h13	88	59.664	Kryptolebias_marmoratus
ENSSPUG00000013358	ZC3H13	60	75.142	ENSLACG00000003806	ZC3H13	55	74.432	Latimeria_chalumnae
ENSSPUG00000013358	ZC3H13	60	80.087	ENSMPUG00000001602	ZC3H13	51	82.006	Mustela_putorius_furo
ENSSPUG00000013358	ZC3H13	58	82.096	ENSMLUG00000006920	ZC3H13	53	82.096	Myotis_lucifugus
ENSSPUG00000013358	ZC3H13	60	77.922	ENSNGAG00000002157	Zc3h13	53	77.922	Nannospalax_galili
ENSSPUG00000013358	ZC3H13	57	65.174	ENSONIG00000012236	zc3h13	54	63.256	Oreochromis_niloticus
ENSSPUG00000013358	ZC3H13	61	81.442	ENSPPAG00000034465	ZC3H13	54	82.251	Pan_paniscus
ENSSPUG00000013358	ZC3H13	60	81.818	ENSPPRG00000005440	ZC3H13	53	82.055	Panthera_pardus
ENSSPUG00000013358	ZC3H13	60	81.818	ENSPTIG00000014867	ZC3H13	52	81.818	Panthera_tigris_altaica
ENSSPUG00000013358	ZC3H13	63	80.982	ENSPANG00000014127	ZC3H13	53	81.818	Papio_anubis
ENSSPUG00000013358	ZC3H13	56	63.303	ENSPKIG00000019756	zc3h13	50	57.563	Paramormyrops_kingsleyae
ENSSPUG00000013358	ZC3H13	55	84.604	ENSPSIG00000012518	ZC3H13	98	82.759	Pelodiscus_sinensis
ENSSPUG00000013358	ZC3H13	62	62.140	ENSPFOG00000005039	zc3h13	55	62.140	Poecilia_formosa
ENSSPUG00000013358	ZC3H13	62	62.551	ENSPLAG00000014095	zc3h13	56	62.551	Poecilia_latipinna
ENSSPUG00000013358	ZC3H13	62	62.140	ENSPMEG00000006928	zc3h13	56	62.140	Poecilia_mexicana
ENSSPUG00000013358	ZC3H13	70	87.903	ENSPCAG00000001146	ZC3H13	70	85.887	Procavia_capensis
ENSSPUG00000013358	ZC3H13	51	93.514	ENSPVAG00000012353	ZC3H13	74	83.616	Pteropus_vampyrus
ENSSPUG00000013358	ZC3H13	59	64.159	ENSPNAG00000011008	zc3h13	55	63.478	Pygocentrus_nattereri
ENSSPUG00000013358	ZC3H13	59	63.043	ENSSDUG00000021808	zc3h13	91	58.652	Seriola_dumerili
ENSSPUG00000013358	ZC3H13	55	80.828	ENSSARG00000007106	ZC3H13	50	81.135	Sorex_araneus
ENSSPUG00000013358	ZC3H13	59	81.902	ENSSSCG00000009414	ZC3H13	54	81.748	Sus_scrofa
ENSSPUG00000013358	ZC3H13	88	58.952	ENSTNIG00000014523	zc3h13	82	58.264	Tetraodon_nigroviridis
ENSSPUG00000013358	ZC3H13	90	81.385	ENSTTRG00000003611	ZC3H13	87	81.385	Tursiops_truncatus
ENSSPUG00000013358	ZC3H13	82	81.132	ENSVPAG00000005179	ZC3H13	79	81.132	Vicugna_pacos
ENSSPUG00000013358	ZC3H13	61	73.478	ENSXETG00000014637	zc3h13	97	71.648	Xenopus_tropicalis