EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000013424 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 30923 bases
Position: chrQEPC01005805.1:964202-995124
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000017354	zf-C2H2	PF00096.26	2.4e-12	1	2
ENSSPUP00000017354	zf-C2H2	PF00096.26	2.4e-12	2	2
ENSSPUP00000017354	zf-met	PF12874.7	5.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000018483	PRDM12-201	1065	-	ENSSPUP00000017354	354 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000013424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000013424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000013424	PRDM12	76	42.424	ENSSPUG00000009941	PRDM5	92	42.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000013424	PRDM12	94	92.515	ENSG00000130711	PRDM12	100	88.011	Homo_sapiens
ENSSPUG00000013424	PRDM12	99	76.302	ENSAPOG00000016051	prdm12b	100	76.823	Acanthochromis_polyacanthus
ENSSPUG00000013424	PRDM12	99	67.575	ENSAPOG00000018234	-	100	67.575	Acanthochromis_polyacanthus
ENSSPUG00000013424	PRDM12	91	91.022	ENSAMEG00000016234	PRDM12	99	91.022	Ailuropoda_melanoleuca
ENSSPUG00000013424	PRDM12	99	78.329	ENSACIG00000005193	-	100	78.851	Amphilophus_citrinellus
ENSSPUG00000013424	PRDM12	99	78.457	ENSACIG00000019578	prdm12b	100	78.723	Amphilophus_citrinellus
ENSSPUG00000013424	PRDM12	99	77.309	ENSAOCG00000015040	prdm12b	100	77.573	Amphiprion_ocellaris
ENSSPUG00000013424	PRDM12	100	73.629	ENSAPEG00000022849	-	100	74.935	Amphiprion_percula
ENSSPUG00000013424	PRDM12	99	77.926	ENSAPEG00000015092	prdm12b	100	78.191	Amphiprion_percula
ENSSPUG00000013424	PRDM12	95	81.633	ENSATEG00000014595	-	99	81.633	Anabas_testudineus
ENSSPUG00000013424	PRDM12	96	92.353	ENSANAG00000020616	PRDM12	100	92.353	Aotus_nancymaae
ENSSPUG00000013424	PRDM12	99	75.635	ENSACLG00000007631	-	100	77.411	Astatotilapia_calliptera
ENSSPUG00000013424	PRDM12	99	80.663	ENSACLG00000011876	prdm12b	100	80.663	Astatotilapia_calliptera
ENSSPUG00000013424	PRDM12	99	81.111	ENSAMXG00000008540	PRDM12	100	81.111	Astyanax_mexicanus
ENSSPUG00000013424	PRDM12	99	83.514	ENSAMXG00000033665	prdm12b	100	85.405	Astyanax_mexicanus
ENSSPUG00000013424	PRDM12	94	92.814	ENSBTAG00000023797	PRDM12	100	89.751	Bos_taurus
ENSSPUG00000013424	PRDM12	94	92.515	ENSCJAG00000020540	PRDM12	100	89.722	Callithrix_jacchus
ENSSPUG00000013424	PRDM12	82	92.440	ENSCAFG00000023076	PRDM12	99	88.162	Canis_familiaris
ENSSPUG00000013424	PRDM12	94	93.114	ENSCAFG00020024046	PRDM12	100	89.286	Canis_lupus_dingo
ENSSPUG00000013424	PRDM12	94	93.114	ENSCHIG00000025005	PRDM12	100	89.779	Capra_hircus
ENSSPUG00000013424	PRDM12	88	92.971	ENSCPOG00000005901	PRDM12	95	92.971	Cavia_porcellus
ENSSPUG00000013424	PRDM12	94	92.515	ENSCCAG00000037485	PRDM12	100	88.981	Cebus_capucinus
ENSSPUG00000013424	PRDM12	94	92.515	ENSCATG00000020327	PRDM12	100	88.981	Cercocebus_atys
ENSSPUG00000013424	PRDM12	94	92.814	ENSCLAG00000005499	PRDM12	92	92.814	Chinchilla_lanigera
ENSSPUG00000013424	PRDM12	94	92.515	ENSCSAG00000014756	PRDM12	100	88.736	Chlorocebus_sabaeus
ENSSPUG00000013424	PRDM12	100	97.175	ENSCPBG00000022628	PRDM12	100	97.175	Chrysemys_picta_bellii
ENSSPUG00000013424	PRDM12	94	92.515	ENSCGRG00001015005	Prdm12	100	88.251	Cricetulus_griseus_chok1gshd
ENSSPUG00000013424	PRDM12	99	74.615	ENSCVAG00000000944	-	100	75.897	Cyprinodon_variegatus
ENSSPUG00000013424	PRDM12	99	78.437	ENSCVAG00000017166	prdm12b	100	78.976	Cyprinodon_variegatus
ENSSPUG00000013424	PRDM12	99	86.339	ENSDARG00000007430	prdm12b	100	86.339	Danio_rerio
ENSSPUG00000013424	PRDM12	94	92.216	ENSDNOG00000042302	PRDM12	99	89.197	Dasypus_novemcinctus
ENSSPUG00000013424	PRDM12	94	60.976	ENSEBUG00000016780	prdm12b	82	62.331	Eptatretus_burgeri
ENSSPUG00000013424	PRDM12	96	92.941	ENSEASG00005008472	PRDM12	100	89.779	Equus_asinus_asinus
ENSSPUG00000013424	PRDM12	96	92.941	ENSECAG00000005933	PRDM12	100	89.779	Equus_caballus
ENSSPUG00000013424	PRDM12	99	79.722	ENSELUG00000013674	PRDM12	99	79.722	Esox_lucius
ENSSPUG00000013424	PRDM12	99	83.558	ENSELUG00000009905	prdm12b	100	83.558	Esox_lucius
ENSSPUG00000013424	PRDM12	94	93.114	ENSFCAG00000043086	PRDM12	100	89.532	Felis_catus
ENSSPUG00000013424	PRDM12	100	96.328	ENSFALG00000001445	PRDM12	89	96.328	Ficedula_albicollis
ENSSPUG00000013424	PRDM12	99	77.540	ENSFHEG00000003944	prdm12b	100	78.342	Fundulus_heteroclitus
ENSSPUG00000013424	PRDM12	99	77.261	ENSFHEG00000007746	-	100	77.778	Fundulus_heteroclitus
ENSSPUG00000013424	PRDM12	99	81.638	ENSGMOG00000011797	prdm12b	99	81.638	Gadus_morhua
ENSSPUG00000013424	PRDM12	100	96.328	ENSGALG00000003895	PRDM12	100	96.328	Gallus_gallus
ENSSPUG00000013424	PRDM12	100	76.658	ENSGAFG00000010827	prdm12b	100	77.984	Gambusia_affinis
ENSSPUG00000013424	PRDM12	100	79.839	ENSGACG00000016713	prdm12b	100	79.839	Gasterosteus_aculeatus
ENSSPUG00000013424	PRDM12	100	96.893	ENSGAGG00000014083	PRDM12	100	96.893	Gopherus_agassizii
ENSSPUG00000013424	PRDM12	94	92.216	ENSGGOG00000010568	PRDM12	100	87.978	Gorilla_gorilla
ENSSPUG00000013424	PRDM12	99	75.635	ENSHBUG00000022537	-	93	77.411	Haplochromis_burtoni
ENSSPUG00000013424	PRDM12	99	79.144	ENSHBUG00000022878	prdm12b	100	79.144	Haplochromis_burtoni
ENSSPUG00000013424	PRDM12	94	91.617	ENSHGLG00000013939	PRDM12	100	87.397	Heterocephalus_glaber_female
ENSSPUG00000013424	PRDM12	99	75.138	ENSHCOG00000021167	-	100	75.138	Hippocampus_comes
ENSSPUG00000013424	PRDM12	92	80.409	ENSHCOG00000003663	prdm12b	100	74.046	Hippocampus_comes
ENSSPUG00000013424	PRDM12	99	84.783	ENSIPUG00000017053	prdm12b	100	85.326	Ictalurus_punctatus
ENSSPUG00000013424	PRDM12	99	78.297	ENSIPUG00000019544	PRDM12	100	78.297	Ictalurus_punctatus
ENSSPUG00000013424	PRDM12	95	92.899	ENSSTOG00000005986	PRDM12	88	92.899	Ictidomys_tridecemlineatus
ENSSPUG00000013424	PRDM12	93	93.030	ENSJJAG00000005424	Prdm12	100	93.030	Jaculus_jaculus
ENSSPUG00000013424	PRDM12	99	73.267	ENSKMAG00000016921	prdm12b	100	73.762	Kryptolebias_marmoratus
ENSSPUG00000013424	PRDM12	99	81.564	ENSKMAG00000021205	-	99	81.564	Kryptolebias_marmoratus
ENSSPUG00000013424	PRDM12	99	77.778	ENSLBEG00000017769	prdm12b	100	78.307	Labrus_bergylta
ENSSPUG00000013424	PRDM12	99	77.632	ENSLBEG00000007776	-	100	78.947	Labrus_bergylta
ENSSPUG00000013424	PRDM12	99	92.351	ENSLACG00000017560	PRDM12	99	92.351	Latimeria_chalumnae
ENSSPUG00000013424	PRDM12	99	87.052	ENSLOCG00000005429	prdm12b	99	87.603	Lepisosteus_oculatus
ENSSPUG00000013424	PRDM12	94	91.471	ENSLAFG00000006979	PRDM12	93	91.354	Loxodonta_africana
ENSSPUG00000013424	PRDM12	100	86.104	ENSMFAG00000040322	PRDM12	100	88.283	Macaca_fascicularis
ENSSPUG00000013424	PRDM12	94	92.515	ENSMNEG00000037234	PRDM12	100	88.981	Macaca_nemestrina
ENSSPUG00000013424	PRDM12	99	74.112	ENSMAMG00000018988	-	100	76.607	Mastacembelus_armatus
ENSSPUG00000013424	PRDM12	99	79.200	ENSMAMG00000013212	prdm12b	100	79.733	Mastacembelus_armatus
ENSSPUG00000013424	PRDM12	99	75.253	ENSMZEG00005000415	PRDM12	100	77.020	Maylandia_zebra
ENSSPUG00000013424	PRDM12	98	96.264	ENSMGAG00000005438	PRDM12	98	96.264	Meleagris_gallopavo
ENSSPUG00000013424	PRDM12	100	88.493	ENSMAUG00000013040	Prdm12	100	88.493	Mesocricetus_auratus
ENSSPUG00000013424	PRDM12	96	92.669	ENSMICG00000015480	PRDM12	100	89.503	Microcebus_murinus
ENSSPUG00000013424	PRDM12	99	90.883	ENSMOCG00000021026	Prdm12	93	92.669	Microtus_ochrogaster
ENSSPUG00000013424	PRDM12	100	96.056	ENSMODG00000012108	PRDM12	100	96.056	Monodelphis_domestica
ENSSPUG00000013424	PRDM12	99	68.464	ENSMALG00000021901	prdm12b	99	68.464	Monopterus_albus
ENSSPUG00000013424	PRDM12	94	92.515	MGP_CAROLIEiJ_G0023414	Prdm12	100	88.493	Mus_caroli
ENSSPUG00000013424	PRDM12	94	92.515	ENSMUSG00000079466	Prdm12	100	88.493	Mus_musculus
ENSSPUG00000013424	PRDM12	94	92.515	MGP_PahariEiJ_G0024871	Prdm12	100	88.493	Mus_pahari
ENSSPUG00000013424	PRDM12	94	92.515	MGP_SPRETEiJ_G0024331	Prdm12	100	88.493	Mus_spretus
ENSSPUG00000013424	PRDM12	92	93.272	ENSNGAG00000018480	Prdm12	100	88.547	Nannospalax_galili
ENSSPUG00000013424	PRDM12	99	76.099	ENSNBRG00000024312	-	100	77.473	Neolamprologus_brichardi
ENSSPUG00000013424	PRDM12	99	78.249	ENSNBRG00000006727	prdm12b	100	78.515	Neolamprologus_brichardi
ENSSPUG00000013424	PRDM12	100	85.352	ENSMEUG00000003828	PRDM12	100	85.352	Notamacropus_eugenii
ENSSPUG00000013424	PRDM12	93	92.121	ENSOPRG00000008680	PRDM12	100	92.121	Ochotona_princeps
ENSSPUG00000013424	PRDM12	96	92.375	ENSODEG00000016282	PRDM12	64	92.375	Octodon_degus
ENSSPUG00000013424	PRDM12	61	95.392	ENSOANG00000001043	PRDM12	100	95.392	Ornithorhynchus_anatinus
ENSSPUG00000013424	PRDM12	88	88.498	ENSOCUG00000008241	PRDM12	100	88.498	Oryctolagus_cuniculus
ENSSPUG00000013424	PRDM12	100	76.517	ENSORLG00000007114	prdm12b	100	76.781	Oryzias_latipes
ENSSPUG00000013424	PRDM12	99	74.615	ENSORLG00000017558	-	100	75.897	Oryzias_latipes
ENSSPUG00000013424	PRDM12	99	74.680	ENSORLG00020013167	-	100	75.703	Oryzias_latipes_hni
ENSSPUG00000013424	PRDM12	100	75.591	ENSORLG00020019565	prdm12b	100	76.640	Oryzias_latipes_hni
ENSSPUG00000013424	PRDM12	100	75.989	ENSORLG00015007621	prdm12b	100	77.045	Oryzias_latipes_hsok
ENSSPUG00000013424	PRDM12	99	74.359	ENSORLG00015003435	-	100	75.641	Oryzias_latipes_hsok
ENSSPUG00000013424	PRDM12	99	78.249	ENSOMEG00000007762	-	100	78.515	Oryzias_melastigma
ENSSPUG00000013424	PRDM12	100	75.457	ENSOMEG00000004134	prdm12b	100	76.501	Oryzias_melastigma
ENSSPUG00000013424	PRDM12	94	93.093	ENSOGAG00000007557	PRDM12	100	93.093	Otolemur_garnettii
ENSSPUG00000013424	PRDM12	83	90.444	ENSPPAG00000031506	-	99	90.444	Pan_paniscus
ENSSPUG00000013424	PRDM12	100	82.451	ENSPPRG00000023024	PRDM12	92	82.451	Panthera_pardus
ENSSPUG00000013424	PRDM12	94	92.515	ENSPTRG00000021475	PRDM12	100	88.251	Pan_troglodytes
ENSSPUG00000013424	PRDM12	94	92.515	ENSPTRG00000043324	-	100	88.251	Pan_troglodytes
ENSSPUG00000013424	PRDM12	94	92.515	ENSPANG00000025967	PRDM12	100	88.981	Papio_anubis
ENSSPUG00000013424	PRDM12	97	77.966	ENSPKIG00000004305	PRDM12	99	78.902	Paramormyrops_kingsleyae
ENSSPUG00000013424	PRDM12	99	84.409	ENSPKIG00000007228	prdm12b	100	84.677	Paramormyrops_kingsleyae
ENSSPUG00000013424	PRDM12	100	96.045	ENSPSIG00000006739	PRDM12	100	96.045	Pelodiscus_sinensis
ENSSPUG00000013424	PRDM12	99	75.718	ENSPMGG00000002356	-	100	75.718	Periophthalmus_magnuspinnatus
ENSSPUG00000013424	PRDM12	100	79.891	ENSPMGG00000008867	prdm12b	100	79.891	Periophthalmus_magnuspinnatus
ENSSPUG00000013424	PRDM12	94	92.470	ENSPEMG00000009969	Prdm12	96	88.920	Peromyscus_maniculatus_bairdii
ENSSPUG00000013424	PRDM12	100	95.775	ENSPCIG00000024119	PRDM12	100	95.775	Phascolarctos_cinereus
ENSSPUG00000013424	PRDM12	99	79.515	ENSPFOG00000019841	prdm12b	100	79.515	Poecilia_formosa
ENSSPUG00000013424	PRDM12	100	76.316	ENSPLAG00000016626	prdm12b	100	77.632	Poecilia_latipinna
ENSSPUG00000013424	PRDM12	97	75.676	ENSPMEG00000016698	prdm12b	100	77.027	Poecilia_mexicana
ENSSPUG00000013424	PRDM12	100	76.115	ENSPREG00000015073	prdm12b	100	77.428	Poecilia_reticulata
ENSSPUG00000013424	PRDM12	95	78.324	ENSPREG00000003211	-	94	78.324	Poecilia_reticulata
ENSSPUG00000013424	PRDM12	97	90.988	ENSPPYG00000019694	PRDM12	98	90.988	Pongo_abelii
ENSSPUG00000013424	PRDM12	94	93.114	ENSPCOG00000022255	PRDM12	100	89.071	Propithecus_coquereli
ENSSPUG00000013424	PRDM12	94	93.413	ENSPVAG00000001511	PRDM12	100	89.071	Pteropus_vampyrus
ENSSPUG00000013424	PRDM12	99	78.457	ENSPNYG00000009607	prdm12b	100	78.457	Pundamilia_nyererei
ENSSPUG00000013424	PRDM12	99	75.253	ENSPNYG00000013589	-	100	77.020	Pundamilia_nyererei
ENSSPUG00000013424	PRDM12	99	75.538	ENSPNAG00000013396	PRDM12	100	76.613	Pygocentrus_nattereri
ENSSPUG00000013424	PRDM12	99	84.511	ENSPNAG00000024532	prdm12b	100	85.870	Pygocentrus_nattereri
ENSSPUG00000013424	PRDM12	94	92.515	ENSRNOG00000009218	Prdm12	100	88.493	Rattus_norvegicus
ENSSPUG00000013424	PRDM12	90	93.375	ENSRBIG00000042712	PRDM12	98	85.714	Rhinopithecus_bieti
ENSSPUG00000013424	PRDM12	91	93.458	ENSRROG00000043554	PRDM12	100	93.458	Rhinopithecus_roxellana
ENSSPUG00000013424	PRDM12	100	94.944	ENSSHAG00000015972	PRDM12	100	94.944	Sarcophilus_harrisii
ENSSPUG00000013424	PRDM12	99	75.064	ENSSMAG00000003754	prdm12b	100	75.835	Scophthalmus_maximus
ENSSPUG00000013424	PRDM12	99	77.807	ENSSDUG00000023498	prdm12b	100	77.807	Seriola_dumerili
ENSSPUG00000013424	PRDM12	96	81.050	ENSSDUG00000019071	-	100	77.807	Seriola_dumerili
ENSSPUG00000013424	PRDM12	99	78.478	ENSSLDG00000009557	prdm12b	100	78.478	Seriola_lalandi_dorsalis
ENSSPUG00000013424	PRDM12	99	82.584	ENSSLDG00000013562	-	100	82.584	Seriola_lalandi_dorsalis
ENSSPUG00000013424	PRDM12	99	77.105	ENSSPAG00000018824	prdm12b	100	78.421	Stegastes_partitus
ENSSPUG00000013424	PRDM12	99	68.394	ENSSPAG00000022420	-	100	71.237	Stegastes_partitus
ENSSPUG00000013424	PRDM12	94	93.114	ENSSSCG00000005703	PRDM12	100	89.286	Sus_scrofa
ENSSPUG00000013424	PRDM12	99	79.730	ENSTRUG00000018659	prdm12b	100	80.000	Takifugu_rubripes
ENSSPUG00000013424	PRDM12	99	78.947	ENSTRUG00000013239	-	100	78.947	Takifugu_rubripes
ENSSPUG00000013424	PRDM12	99	77.311	ENSTNIG00000005859	-	99	77.311	Tetraodon_nigroviridis
ENSSPUG00000013424	PRDM12	99	79.189	ENSTNIG00000009020	prdm12b	99	79.459	Tetraodon_nigroviridis
ENSSPUG00000013424	PRDM12	94	93.114	ENSUAMG00000009653	PRDM12	94	92.375	Ursus_americanus
ENSSPUG00000013424	PRDM12	94	93.072	ENSVVUG00000027662	PRDM12	79	93.072	Vulpes_vulpes
ENSSPUG00000013424	PRDM12	100	77.333	ENSXCOG00000002836	prdm12b	100	78.133	Xiphophorus_couchianus
ENSSPUG00000013424	PRDM12	99	77.600	ENSXMAG00000005537	prdm12b	100	78.400	Xiphophorus_maculatus
ENSSPUG00000013424	PRDM12	99	75.521	ENSXMAG00000028012	-	100	76.042	Xiphophorus_maculatus