EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000013734 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 2192 bases
Position: chrQEPC01009705.1:2332150-2334341
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000017780	La	PF05383.17	8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000018935	-	1926	-	ENSSPUP00000017780	641 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000013734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000013734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000013734	-	64	45.814	ENSSPUG00000016552	LARP4	76	40.704
ENSSPUG00000013734	-	100	90.356	ENSSPUG00000002102	-	100	90.504

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000013734	-	91	79.216	ENSG00000107929	LARP4B	90	79.216	Homo_sapiens
ENSSPUG00000013734	-	100	58.333	ENSAPOG00000020531	LARP4B	100	59.149	Acanthochromis_polyacanthus
ENSSPUG00000013734	-	100	77.759	ENSAMEG00000001810	LARP4B	90	77.759	Ailuropoda_melanoleuca
ENSSPUG00000013734	-	78	66.422	ENSAOCG00000007887	-	73	89.286	Amphiprion_ocellaris
ENSSPUG00000013734	-	96	63.823	ENSAPEG00000002512	LARP4B	90	62.399	Amphiprion_percula
ENSSPUG00000013734	-	100	62.303	ENSATEG00000012614	LARP4B	94	63.249	Anabas_testudineus
ENSSPUG00000013734	-	100	90.323	ENSAPLG00000003813	LARP4B	87	90.323	Anas_platyrhynchos
ENSSPUG00000013734	-	100	82.955	ENSACAG00000002858	LARP4B	92	82.955	Anolis_carolinensis
ENSSPUG00000013734	-	91	77.929	ENSANAG00000007531	-	80	77.929	Aotus_nancymaae
ENSSPUG00000013734	-	100	62.599	ENSACLG00000026356	LARP4B	100	59.917	Astatotilapia_calliptera
ENSSPUG00000013734	-	81	60.674	ENSAMXG00000003335	larp4b	73	60.300	Astyanax_mexicanus
ENSSPUG00000013734	-	91	76.910	ENSBTAG00000013899	LARP4B	82	76.650	Bos_taurus
ENSSPUG00000013734	-	99	77.929	ENSCJAG00000018434	LARP4B	89	77.929	Callithrix_jacchus
ENSSPUG00000013734	-	91	78.098	ENSCAFG00020004209	LARP4B	79	78.098	Canis_lupus_dingo
ENSSPUG00000013734	-	100	76.311	ENSCHIG00000013543	LARP4B	90	76.311	Capra_hircus
ENSSPUG00000013734	-	91	78.778	ENSTSYG00000002568	LARP4B	99	78.778	Carlito_syrichta
ENSSPUG00000013734	-	91	73.684	ENSCAPG00000009725	LARP4B	81	73.684	Cavia_aperea
ENSSPUG00000013734	-	99	80.475	ENSCPOG00000009375	LARP4B	88	80.475	Cavia_porcellus
ENSSPUG00000013734	-	91	77.759	ENSCCAG00000024869	LARP4B	80	77.759	Cebus_capucinus
ENSSPUG00000013734	-	91	79.117	ENSCATG00000019750	LARP4B	90	76.570	Cercocebus_atys
ENSSPUG00000013734	-	99	79.626	ENSCLAG00000011570	LARP4B	88	79.626	Chinchilla_lanigera
ENSSPUG00000013734	-	71	96.000	ENSCHOG00000007831	-	62	96.000	Choloepus_hoffmanni
ENSSPUG00000013734	-	100	91.482	ENSCPBG00000017063	LARP4B	89	91.482	Chrysemys_picta_bellii
ENSSPUG00000013734	-	91	76.570	ENSCANG00000038021	LARP4B	90	76.570	Colobus_angolensis_palliatus
ENSSPUG00000013734	-	91	79.796	ENSCGRG00001022930	Larp4b	80	79.796	Cricetulus_griseus_chok1gshd
ENSSPUG00000013734	-	86	86.091	ENSCGRG00000006022	Larp4b	80	79.796	Cricetulus_griseus_crigri
ENSSPUG00000013734	-	100	58.705	ENSCSEG00000007342	LARP4B	100	58.849	Cynoglossus_semilaevis
ENSSPUG00000013734	-	100	64.912	ENSCVAG00000008910	LARP4B	100	59.501	Cyprinodon_variegatus
ENSSPUG00000013734	-	85	56.014	ENSDARG00000062146	larp4b	74	57.374	Danio_rerio
ENSSPUG00000013734	-	91	81.834	ENSDNOG00000045543	-	82	87.826	Dasypus_novemcinctus
ENSSPUG00000013734	-	98	76.831	ENSDORG00000009328	Larp4b	87	76.831	Dipodomys_ordii
ENSSPUG00000013734	-	81	77.350	ENSETEG00000011249	LARP4B	75	77.350	Echinops_telfairi
ENSSPUG00000013734	-	91	78.778	ENSEASG00005019068	-	90	78.778	Equus_asinus_asinus
ENSSPUG00000013734	-	91	78.778	ENSECAG00000024040	LARP4B	90	78.778	Equus_caballus
ENSSPUG00000013734	-	91	78.024	ENSEEUG00000008391	LARP4B	78	78.194	Erinaceus_europaeus
ENSSPUG00000013734	-	88	40.836	ENSELUG00000001417	-	94	40.610	Esox_lucius
ENSSPUG00000013734	-	100	64.000	ENSELUG00000008626	LARP4B	90	64.696	Esox_lucius
ENSSPUG00000013734	-	100	78.608	ENSFCAG00000000721	-	90	78.608	Felis_catus
ENSSPUG00000013734	-	100	90.136	ENSFALG00000006961	LARP4B	89	90.136	Ficedula_albicollis
ENSSPUG00000013734	-	100	79.492	ENSFDAG00000006158	LARP4B	87	79.492	Fukomys_damarensis
ENSSPUG00000013734	-	91	55.246	ENSFHEG00000013037	LARP4B	65	90.756	Fundulus_heteroclitus
ENSSPUG00000013734	-	71	78.983	ENSGMOG00000010818	-	75	78.983	Gadus_morhua
ENSSPUG00000013734	-	100	89.679	ENSGALG00000006672	LARP4B	89	89.679	Gallus_gallus
ENSSPUG00000013734	-	91	63.184	ENSGACG00000017535	LARP4B	76	63.516	Gasterosteus_aculeatus
ENSSPUG00000013734	-	91	90.460	ENSGAGG00000008598	LARP4B	86	90.460	Gopherus_agassizii
ENSSPUG00000013734	-	91	79.387	ENSGGOG00000003572	LARP4B	90	79.387	Gorilla_gorilla
ENSSPUG00000013734	-	100	62.124	ENSHBUG00000007535	LARP4B	100	59.501	Haplochromis_burtoni
ENSSPUG00000013734	-	99	80.169	ENSHGLG00000012936	LARP4B	88	86.811	Heterocephalus_glaber_female
ENSSPUG00000013734	-	99	80.169	ENSHGLG00100016220	-	89	80.169	Heterocephalus_glaber_male
ENSSPUG00000013734	-	78	68.938	ENSHGLG00100017261	-	79	68.938	Heterocephalus_glaber_male
ENSSPUG00000013734	-	99	58.884	ENSHCOG00000011581	LARP4B	89	59.178	Hippocampus_comes
ENSSPUG00000013734	-	82	59.108	ENSIPUG00000009705	larp4b	75	58.736	Ictalurus_punctatus
ENSSPUG00000013734	-	99	77.327	ENSSTOG00000000587	LARP4B	89	77.327	Ictidomys_tridecemlineatus
ENSSPUG00000013734	-	98	79.966	ENSJJAG00000020847	Larp4b	88	79.966	Jaculus_jaculus
ENSSPUG00000013734	-	100	63.091	ENSKMAG00000021674	LARP4B	100	60.304	Kryptolebias_marmoratus
ENSSPUG00000013734	-	79	70.276	ENSLBEG00000025293	-	81	67.530	Labrus_bergylta
ENSSPUG00000013734	-	91	79.082	ENSLACG00000009492	LARP4B	86	79.082	Latimeria_chalumnae
ENSSPUG00000013734	-	99	77.273	ENSLOCG00000012290	larp4b	93	74.372	Lepisosteus_oculatus
ENSSPUG00000013734	-	98	83.390	ENSLAFG00000015334	LARP4B	87	83.390	Loxodonta_africana
ENSSPUG00000013734	-	91	79.117	ENSMFAG00000001766	LARP4B	90	76.570	Macaca_fascicularis
ENSSPUG00000013734	-	91	79.117	ENSMMUG00000005279	LARP4B	90	79.117	Macaca_mulatta
ENSSPUG00000013734	-	91	78.947	ENSMNEG00000014019	LARP4B	90	76.401	Macaca_nemestrina
ENSSPUG00000013734	-	91	78.983	ENSMLEG00000035198	LARP4B	90	76.441	Mandrillus_leucophaeus
ENSSPUG00000013734	-	100	61.465	ENSMAMG00000013742	LARP4B	94	61.943	Mastacembelus_armatus
ENSSPUG00000013734	-	91	62.124	ENSMZEG00005014594	-	86	62.381	Maylandia_zebra
ENSSPUG00000013734	-	100	59.654	ENSMZEG00005006498	-	97	65.823	Maylandia_zebra
ENSSPUG00000013734	-	100	86.224	ENSMGAG00000005472	LARP4B	89	86.224	Meleagris_gallopavo
ENSSPUG00000013734	-	99	79.492	ENSMAUG00000021657	Larp4b	88	79.492	Mesocricetus_auratus
ENSSPUG00000013734	-	91	76.831	ENSMICG00000001301	LARP4B	83	77.002	Microcebus_murinus
ENSSPUG00000013734	-	98	62.946	ENSMOCG00000021452	Larp4b	86	63.411	Microtus_ochrogaster
ENSSPUG00000013734	-	100	58.382	ENSMMOG00000011253	-	100	59.019	Mola_mola
ENSSPUG00000013734	-	100	80.268	ENSMODG00000005957	LARP4B	97	80.268	Monodelphis_domestica
ENSSPUG00000013734	-	100	52.847	ENSMALG00000012432	LARP4B	100	53.869	Monopterus_albus
ENSSPUG00000013734	-	99	75.117	MGP_CAROLIEiJ_G0018216	Larp4b	84	75.272	Mus_caroli
ENSSPUG00000013734	-	91	80.000	ENSMUSG00000033499	Larp4b	79	80.169	Mus_musculus
ENSSPUG00000013734	-	91	80.000	MGP_PahariEiJ_G0019266	Larp4b	80	80.000	Mus_pahari
ENSSPUG00000013734	-	91	79.831	MGP_SPRETEiJ_G0019074	Larp4b	79	80.000	Mus_spretus
ENSSPUG00000013734	-	91	77.816	ENSMPUG00000016220	LARP4B	76	77.986	Mustela_putorius_furo
ENSSPUG00000013734	-	99	69.499	ENSMLUG00000005880	LARP4B	91	72.178	Myotis_lucifugus
ENSSPUG00000013734	-	99	78.136	ENSNGAG00000001750	Larp4b	89	78.136	Nannospalax_galili
ENSSPUG00000013734	-	100	52.654	ENSNBRG00000020018	LARP4B	100	52.941	Neolamprologus_brichardi
ENSSPUG00000013734	-	91	78.778	ENSNLEG00000013442	LARP4B	90	78.778	Nomascus_leucogenys
ENSSPUG00000013734	-	80	77.500	ENSMEUG00000013114	-	78	77.500	Notamacropus_eugenii
ENSSPUG00000013734	-	99	77.181	ENSOPRG00000003300	LARP4B	88	77.181	Ochotona_princeps
ENSSPUG00000013734	-	91	75.552	ENSODEG00000001109	LARP4B	100	59.253	Octodon_degus
ENSSPUG00000013734	-	100	63.399	ENSONIG00000017705	LARP4B	82	62.540	Oreochromis_niloticus
ENSSPUG00000013734	-	100	82.609	ENSOANG00000006100	LARP4B	89	82.776	Ornithorhynchus_anatinus
ENSSPUG00000013734	-	91	80.306	ENSOCUG00000004950	LARP4B	75	80.306	Oryctolagus_cuniculus
ENSSPUG00000013734	-	92	61.356	ENSORLG00000006080	LARP4B	82	61.672	Oryzias_latipes
ENSSPUG00000013734	-	100	59.613	ENSORLG00020020940	LARP4B	100	60.028	Oryzias_latipes_hni
ENSSPUG00000013734	-	100	59.583	ENSORLG00015020608	LARP4B	100	59.059	Oryzias_latipes_hsok
ENSSPUG00000013734	-	100	60.095	ENSOMEG00000019619	LARP4B	100	58.136	Oryzias_melastigma
ENSSPUG00000013734	-	91	77.080	ENSOGAG00000011540	LARP4B	85	77.080	Otolemur_garnettii
ENSSPUG00000013734	-	100	76.094	ENSOARG00000015320	LARP4B	89	76.094	Ovis_aries
ENSSPUG00000013734	-	91	79.046	ENSPPAG00000039232	LARP4B	90	79.046	Pan_paniscus
ENSSPUG00000013734	-	100	78.705	ENSPPRG00000009489	LARP4B	90	78.705	Panthera_pardus
ENSSPUG00000013734	-	100	78.705	ENSPTIG00000008543	LARP4B	90	78.705	Panthera_tigris_altaica
ENSSPUG00000013734	-	91	79.046	ENSPTRG00000002235	LARP4B	90	79.046	Pan_troglodytes
ENSSPUG00000013734	-	91	79.117	ENSPANG00000023546	LARP4B	90	76.570	Papio_anubis
ENSSPUG00000013734	-	99	63.462	ENSPKIG00000012368	LARP4B	93	63.462	Paramormyrops_kingsleyae
ENSSPUG00000013734	-	64	94.222	ENSPSIG00000005600	LARP4B	80	94.222	Pelodiscus_sinensis
ENSSPUG00000013734	-	88	55.276	ENSPMGG00000008261	LARP4B	83	55.591	Periophthalmus_magnuspinnatus
ENSSPUG00000013734	-	99	79.626	ENSPEMG00000014052	Larp4b	89	79.626	Peromyscus_maniculatus_bairdii
ENSSPUG00000013734	-	100	63.333	ENSPFOG00000000029	LARP4B	92	62.303	Poecilia_formosa
ENSSPUG00000013734	-	100	63.333	ENSPLAG00000002871	LARP4B	100	58.496	Poecilia_latipinna
ENSSPUG00000013734	-	100	63.333	ENSPMEG00000016361	LARP4B	100	59.642	Poecilia_mexicana
ENSSPUG00000013734	-	100	78.644	ENSPPYG00000002035	LARP4B	88	78.644	Pongo_abelii
ENSSPUG00000013734	-	99	77.759	ENSPCOG00000014688	LARP4B	90	77.759	Propithecus_coquereli
ENSSPUG00000013734	-	91	71.574	ENSPVAG00000009784	LARP4B	83	71.574	Pteropus_vampyrus
ENSSPUG00000013734	-	100	62.599	ENSPNYG00000024252	LARP4B	100	59.917	Pundamilia_nyererei
ENSSPUG00000013734	-	84	60.219	ENSPNAG00000028956	larp4b	75	59.854	Pygocentrus_nattereri
ENSSPUG00000013734	-	91	79.762	ENSRNOG00000015888	Larp4b	80	79.932	Rattus_norvegicus
ENSSPUG00000013734	-	91	78.947	ENSRBIG00000033294	LARP4B	90	78.947	Rhinopithecus_bieti
ENSSPUG00000013734	-	91	78.947	ENSRROG00000033879	LARP4B	90	78.947	Rhinopithecus_roxellana
ENSSPUG00000013734	-	91	71.647	ENSSBOG00000021109	LARP4B	79	71.647	Saimiri_boliviensis_boliviensis
ENSSPUG00000013734	-	100	82.373	ENSSHAG00000013392	LARP4B	97	82.373	Sarcophilus_harrisii
ENSSPUG00000013734	-	95	69.231	ENSSFOG00015003256	LARP4B	80	69.231	Scleropages_formosus
ENSSPUG00000013734	-	100	63.333	ENSSMAG00000005982	-	100	59.031	Scophthalmus_maximus
ENSSPUG00000013734	-	100	62.401	ENSSDUG00000006704	LARP4B	100	60.773	Seriola_dumerili
ENSSPUG00000013734	-	100	60.322	ENSSLDG00000020660	LARP4B	100	60.176	Seriola_lalandi_dorsalis
ENSSPUG00000013734	-	72	90.816	ENSSARG00000001243	-	77	90.816	Sorex_araneus
ENSSPUG00000013734	-	100	58.226	ENSSPAG00000014628	LARP4B	100	58.226	Stegastes_partitus
ENSSPUG00000013734	-	91	75.042	ENSSSCG00000011162	LARP4B	76	79.869	Sus_scrofa
ENSSPUG00000013734	-	100	89.171	ENSTGUG00000000811	-	90	89.171	Taeniopygia_guttata
ENSSPUG00000013734	-	88	69.231	ENSTNIG00000007991	LARP4B	84	74.468	Tetraodon_nigroviridis
ENSSPUG00000013734	-	91	60.884	ENSTNIG00000004571	-	79	61.866	Tetraodon_nigroviridis
ENSSPUG00000013734	-	80	84.438	ENSTTRG00000011151	LARP4B	70	84.438	Tursiops_truncatus
ENSSPUG00000013734	-	85	80.527	ENSUAMG00000016461	LARP4B	84	80.527	Ursus_americanus
ENSSPUG00000013734	-	91	78.268	ENSUMAG00000016127	LARP4B	90	78.268	Ursus_maritimus
ENSSPUG00000013734	-	51	89.474	ENSVPAG00000000128	-	63	89.474	Vicugna_pacos
ENSSPUG00000013734	-	100	78.268	ENSVVUG00000008641	LARP4B	90	78.268	Vulpes_vulpes
ENSSPUG00000013734	-	99	80.952	ENSXETG00000016882	larp4b	89	80.952	Xenopus_tropicalis
ENSSPUG00000013734	-	100	54.472	ENSXCOG00000019952	LARP4B	90	69.364	Xiphophorus_couchianus
ENSSPUG00000013734	-	100	63.333	ENSXMAG00000021533	LARP4B	100	60.417	Xiphophorus_maculatus