EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000014590 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: Sm-F
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 5362 bases
Position: chrQEPC01002093.1:312705-318066
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000018906	LSM	PF01423.22	2.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000020137	-	258	-	ENSSPUP00000018906	85 (aa)	-	UPI00085B805A

Gene Model

Click here to download ENSSPUG00000014590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000014590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000014590	-	78	51.515	ENSSPUG00000008657	LSM6	83	51.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000014590	-	99	100.000	ENSG00000139343	SNRPF	98	100.000	Homo_sapiens
ENSSPUG00000014590	-	99	97.619	ENSAPOG00000003377	snrpf	66	97.619	Acanthochromis_polyacanthus
ENSSPUG00000014590	-	87	86.486	ENSAMEG00000018718	-	85	87.671	Ailuropoda_melanoleuca
ENSSPUG00000014590	-	99	100.000	ENSAMEG00000002166	-	99	100.000	Ailuropoda_melanoleuca
ENSSPUG00000014590	-	100	97.647	ENSACIG00000013216	snrpf	100	97.647	Amphilophus_citrinellus
ENSSPUG00000014590	-	100	97.647	ENSAOCG00000015108	snrpf	100	97.647	Amphiprion_ocellaris
ENSSPUG00000014590	-	100	97.647	ENSAPEG00000022022	snrpf	100	97.647	Amphiprion_percula
ENSSPUG00000014590	-	99	97.619	ENSATEG00000022625	snrpf	90	97.619	Anabas_testudineus
ENSSPUG00000014590	-	99	98.810	ENSACAG00000014073	SNRPF	97	98.810	Anolis_carolinensis
ENSSPUG00000014590	-	99	100.000	ENSANAG00000032845	SNRPF	98	100.000	Aotus_nancymaae
ENSSPUG00000014590	-	86	68.493	ENSANAG00000025860	-	82	68.493	Aotus_nancymaae
ENSSPUG00000014590	-	84	91.549	ENSANAG00000020297	-	65	91.549	Aotus_nancymaae
ENSSPUG00000014590	-	100	97.647	ENSACLG00000016066	snrpf	100	97.647	Astatotilapia_calliptera
ENSSPUG00000014590	-	86	94.521	ENSAMXG00000007421	snrpf	85	94.521	Astyanax_mexicanus
ENSSPUG00000014590	-	99	100.000	ENSBTAG00000016271	SNRPF	98	100.000	Bos_taurus
ENSSPUG00000014590	-	89	93.421	ENSBTAG00000050012	-	90	93.151	Bos_taurus
ENSSPUG00000014590	-	93	70.886	WBGene00004918	snr-5	87	72.973	Caenorhabditis_elegans
ENSSPUG00000014590	-	99	100.000	ENSCJAG00000002705	-	98	100.000	Callithrix_jacchus
ENSSPUG00000014590	-	99	100.000	ENSCAFG00000006395	-	76	100.000	Canis_familiaris
ENSSPUG00000014590	-	85	93.056	ENSCAFG00000031151	-	86	93.243	Canis_familiaris
ENSSPUG00000014590	-	92	88.462	ENSCAFG00020013161	-	74	97.143	Canis_lupus_dingo
ENSSPUG00000014590	-	85	93.056	ENSCAFG00020010823	-	86	93.243	Canis_lupus_dingo
ENSSPUG00000014590	-	96	92.683	ENSTSYG00000031636	-	62	94.595	Carlito_syrichta
ENSSPUG00000014590	-	86	86.301	ENSTSYG00000030635	-	84	86.301	Carlito_syrichta
ENSSPUG00000014590	-	99	94.118	ENSTSYG00000036502	-	98	94.118	Carlito_syrichta
ENSSPUG00000014590	-	99	100.000	ENSCAPG00000007242	SNRPF	99	100.000	Cavia_aperea
ENSSPUG00000014590	-	99	100.000	ENSCPOG00000013898	SNRPF	98	100.000	Cavia_porcellus
ENSSPUG00000014590	-	99	100.000	ENSCCAG00000037378	-	98	100.000	Cebus_capucinus
ENSSPUG00000014590	-	99	98.810	ENSCCAG00000017356	-	98	98.810	Cebus_capucinus
ENSSPUG00000014590	-	99	90.476	ENSCCAG00000033627	-	57	91.781	Cebus_capucinus
ENSSPUG00000014590	-	99	100.000	ENSCLAG00000007200	SNRPF	98	100.000	Chinchilla_lanigera
ENSSPUG00000014590	-	99	100.000	ENSCSAG00000003602	-	68	100.000	Chlorocebus_sabaeus
ENSSPUG00000014590	-	73	100.000	ENSCHOG00000009392	SNRPF	97	100.000	Choloepus_hoffmanni
ENSSPUG00000014590	-	86	91.781	ENSCPBG00000006227	-	85	91.781	Chrysemys_picta_bellii
ENSSPUG00000014590	-	99	94.048	ENSCPBG00000024287	-	66	94.048	Chrysemys_picta_bellii
ENSSPUG00000014590	-	99	89.286	ENSCPBG00000026463	-	85	90.411	Chrysemys_picta_bellii
ENSSPUG00000014590	-	99	88.095	ENSCPBG00000001985	-	87	90.411	Chrysemys_picta_bellii
ENSSPUG00000014590	-	99	88.095	ENSCSAVG00000007498	-	83	90.411	Ciona_savignyi
ENSSPUG00000014590	-	99	100.000	ENSCGRG00001017100	-	98	100.000	Cricetulus_griseus_chok1gshd
ENSSPUG00000014590	-	87	93.243	ENSCGRG00001008965	-	57	93.243	Cricetulus_griseus_chok1gshd
ENSSPUG00000014590	-	93	93.671	ENSCGRG00000018878	-	92	93.243	Cricetulus_griseus_crigri
ENSSPUG00000014590	-	99	100.000	ENSCGRG00000000336	-	98	100.000	Cricetulus_griseus_crigri
ENSSPUG00000014590	-	86	95.890	ENSCSEG00000004748	snrpf	85	95.890	Cynoglossus_semilaevis
ENSSPUG00000014590	-	99	97.619	ENSCVAG00000000397	snrpf	67	97.619	Cyprinodon_variegatus
ENSSPUG00000014590	-	99	95.349	ENSDARG00000105037	snrpf	98	95.349	Danio_rerio
ENSSPUG00000014590	-	99	98.810	ENSDNOG00000048989	-	75	98.810	Dasypus_novemcinctus
ENSSPUG00000014590	-	85	84.722	ENSDNOG00000049373	-	63	84.722	Dasypus_novemcinctus
ENSSPUG00000014590	-	99	100.000	ENSDNOG00000043775	-	54	100.000	Dasypus_novemcinctus
ENSSPUG00000014590	-	82	98.571	ENSDORG00000029740	-	85	98.571	Dipodomys_ordii
ENSSPUG00000014590	-	82	88.571	ENSDORG00000025351	-	97	88.571	Dipodomys_ordii
ENSSPUG00000014590	-	99	78.571	FBgn0000426	SmF	83	82.192	Drosophila_melanogaster
ENSSPUG00000014590	-	99	100.000	ENSETEG00000001558	-	98	100.000	Echinops_telfairi
ENSSPUG00000014590	-	96	75.610	ENSEBUG00000001793	-	72	86.567	Eptatretus_burgeri
ENSSPUG00000014590	-	99	100.000	ENSECAG00000019817	SNRPF	68	100.000	Equus_caballus
ENSSPUG00000014590	-	99	100.000	ENSEEUG00000013509	SNRPF	99	100.000	Erinaceus_europaeus
ENSSPUG00000014590	-	86	94.521	ENSELUG00000003121	RUXF	85	94.521	Esox_lucius
ENSSPUG00000014590	-	99	91.667	ENSELUG00000007737	RUXF	84	93.151	Esox_lucius
ENSSPUG00000014590	-	96	78.049	ENSFCAG00000031148	-	70	76.316	Felis_catus
ENSSPUG00000014590	-	86	75.342	ENSFCAG00000021942	-	84	75.342	Felis_catus
ENSSPUG00000014590	-	99	100.000	ENSFCAG00000029966	-	98	100.000	Felis_catus
ENSSPUG00000014590	-	99	100.000	ENSFALG00000010799	SNRPF	98	100.000	Ficedula_albicollis
ENSSPUG00000014590	-	99	100.000	ENSFDAG00000002831	-	98	100.000	Fukomys_damarensis
ENSSPUG00000014590	-	99	97.619	ENSFHEG00000003240	snrpf	74	97.619	Fundulus_heteroclitus
ENSSPUG00000014590	-	99	97.619	ENSGMOG00000007741	snrpf	99	97.619	Gadus_morhua
ENSSPUG00000014590	-	99	100.000	ENSGALG00000011409	SNRPF	98	100.000	Gallus_gallus
ENSSPUG00000014590	-	100	96.471	ENSGAFG00000016187	snrpf	98	96.471	Gambusia_affinis
ENSSPUG00000014590	-	99	96.429	ENSGACG00000020055	snrpf	99	96.429	Gasterosteus_aculeatus
ENSSPUG00000014590	-	87	93.243	ENSGAGG00000012945	-	67	94.521	Gopherus_agassizii
ENSSPUG00000014590	-	93	91.139	ENSGAGG00000022991	-	80	94.118	Gopherus_agassizii
ENSSPUG00000014590	-	71	91.667	ENSGAGG00000011163	-	100	91.667	Gopherus_agassizii
ENSSPUG00000014590	-	79	86.567	ENSGAGG00000014132	-	81	86.567	Gopherus_agassizii
ENSSPUG00000014590	-	71	96.667	ENSGAGG00000020974	-	50	96.667	Gopherus_agassizii
ENSSPUG00000014590	-	91	75.325	ENSGGOG00000039564	-	88	73.973	Gorilla_gorilla
ENSSPUG00000014590	-	96	80.488	ENSGGOG00000039936	-	81	78.082	Gorilla_gorilla
ENSSPUG00000014590	-	100	100.000	ENSGGOG00000001127	-	100	100.000	Gorilla_gorilla
ENSSPUG00000014590	-	99	100.000	ENSHGLG00000009108	SNRPF	98	100.000	Heterocephalus_glaber_female
ENSSPUG00000014590	-	99	98.810	ENSHGLG00000021172	-	98	98.810	Heterocephalus_glaber_female
ENSSPUG00000014590	-	99	98.810	ENSHGLG00100019596	-	98	98.810	Heterocephalus_glaber_male
ENSSPUG00000014590	-	99	100.000	ENSHGLG00100008103	-	99	100.000	Heterocephalus_glaber_male
ENSSPUG00000014590	-	75	84.507	ENSHCOG00000018663	snrpf	55	84.507	Hippocampus_comes
ENSSPUG00000014590	-	100	97.647	ENSIPUG00000018994	snrpf	100	97.647	Ictalurus_punctatus
ENSSPUG00000014590	-	99	100.000	ENSSTOG00000010434	-	98	100.000	Ictidomys_tridecemlineatus
ENSSPUG00000014590	-	99	80.952	ENSJJAG00000004558	-	87	82.192	Jaculus_jaculus
ENSSPUG00000014590	-	79	94.030	ENSJJAG00000004828	-	100	94.030	Jaculus_jaculus
ENSSPUG00000014590	-	99	100.000	ENSJJAG00000011272	-	98	100.000	Jaculus_jaculus
ENSSPUG00000014590	-	99	84.524	ENSJJAG00000010502	-	87	86.301	Jaculus_jaculus
ENSSPUG00000014590	-	100	97.647	ENSKMAG00000013566	snrpf	99	97.647	Kryptolebias_marmoratus
ENSSPUG00000014590	-	99	96.429	ENSLBEG00000008800	snrpf	98	96.429	Labrus_bergylta
ENSSPUG00000014590	-	99	100.000	ENSLACG00000002456	-	72	100.000	Latimeria_chalumnae
ENSSPUG00000014590	-	86	94.521	ENSLOCG00000015744	snrpf	85	94.521	Lepisosteus_oculatus
ENSSPUG00000014590	-	99	100.000	ENSLAFG00000017426	SNRPF	98	100.000	Loxodonta_africana
ENSSPUG00000014590	-	100	96.471	ENSMAMG00000016593	snrpf	100	96.471	Mastacembelus_armatus
ENSSPUG00000014590	-	100	97.647	ENSMZEG00005014701	snrpf	100	97.647	Maylandia_zebra
ENSSPUG00000014590	-	99	100.000	ENSMGAG00000011453	-	76	100.000	Meleagris_gallopavo
ENSSPUG00000014590	-	87	100.000	ENSMAUG00000016909	-	100	100.000	Mesocricetus_auratus
ENSSPUG00000014590	-	72	93.443	ENSMAUG00000010289	-	76	93.443	Mesocricetus_auratus
ENSSPUG00000014590	-	86	94.521	ENSMAUG00000008799	-	85	94.521	Mesocricetus_auratus
ENSSPUG00000014590	-	87	100.000	ENSMAUG00000019737	-	100	100.000	Mesocricetus_auratus
ENSSPUG00000014590	-	99	100.000	ENSMICG00000012153	-	98	100.000	Microcebus_murinus
ENSSPUG00000014590	-	86	93.151	ENSMICG00000030494	-	58	93.151	Microcebus_murinus
ENSSPUG00000014590	-	86	86.301	ENSMOCG00000022166	-	80	86.301	Microtus_ochrogaster
ENSSPUG00000014590	-	99	100.000	ENSMOCG00000020437	Snrpf	98	100.000	Microtus_ochrogaster
ENSSPUG00000014590	-	80	83.824	ENSMOCG00000020220	-	87	83.824	Microtus_ochrogaster
ENSSPUG00000014590	-	99	96.429	ENSMMOG00000007127	snrpf	99	96.429	Mola_mola
ENSSPUG00000014590	-	99	100.000	ENSMODG00000008091	SNRPF	74	100.000	Monodelphis_domestica
ENSSPUG00000014590	-	100	97.647	ENSMALG00000012328	snrpf	100	97.647	Monopterus_albus
ENSSPUG00000014590	-	99	100.000	MGP_CAROLIEiJ_G0015735	-	98	100.000	Mus_caroli
ENSSPUG00000014590	-	99	100.000	ENSMUSG00000020018	Snrpf	98	100.000	Mus_musculus
ENSSPUG00000014590	-	99	100.000	MGP_PahariEiJ_G0031350	Snrpf	98	100.000	Mus_pahari
ENSSPUG00000014590	-	99	100.000	MGP_SPRETEiJ_G0016553	Snrpf	98	100.000	Mus_spretus
ENSSPUG00000014590	-	99	100.000	ENSMPUG00000007176	-	75	100.000	Mustela_putorius_furo
ENSSPUG00000014590	-	99	100.000	ENSMLUG00000029201	-	79	100.000	Myotis_lucifugus
ENSSPUG00000014590	-	99	100.000	ENSMLUG00000013577	-	99	100.000	Myotis_lucifugus
ENSSPUG00000014590	-	99	100.000	ENSMLUG00000026149	-	79	100.000	Myotis_lucifugus
ENSSPUG00000014590	-	99	80.952	ENSMLUG00000026269	-	69	79.452	Myotis_lucifugus
ENSSPUG00000014590	-	99	100.000	ENSMLUG00000027932	-	79	100.000	Myotis_lucifugus
ENSSPUG00000014590	-	99	100.000	ENSNGAG00000024292	-	98	100.000	Nannospalax_galili
ENSSPUG00000014590	-	74	90.476	ENSNGAG00000005851	-	71	90.000	Nannospalax_galili
ENSSPUG00000014590	-	99	97.619	ENSNBRG00000011682	snrpf	86	97.619	Neolamprologus_brichardi
ENSSPUG00000014590	-	86	69.863	ENSMEUG00000000671	SNRPF	86	69.863	Notamacropus_eugenii
ENSSPUG00000014590	-	100	100.000	ENSODEG00000010328	-	100	100.000	Octodon_degus
ENSSPUG00000014590	-	99	100.000	ENSOCUG00000010925	SNRPF	74	100.000	Oryctolagus_cuniculus
ENSSPUG00000014590	-	86	94.521	ENSORLG00020008216	snrpf	86	94.521	Oryzias_latipes_hni
ENSSPUG00000014590	-	86	94.521	ENSORLG00015007418	snrpf	86	94.521	Oryzias_latipes_hsok
ENSSPUG00000014590	-	100	96.471	ENSOMEG00000003018	snrpf	100	96.471	Oryzias_melastigma
ENSSPUG00000014590	-	99	97.619	ENSOGAG00000030323	-	98	97.619	Otolemur_garnettii
ENSSPUG00000014590	-	99	100.000	ENSOARG00000011853	-	73	100.000	Ovis_aries
ENSSPUG00000014590	-	91	75.325	ENSPPAG00000037479	-	88	73.973	Pan_paniscus
ENSSPUG00000014590	-	96	80.488	ENSPPAG00000037544	-	81	78.082	Pan_paniscus
ENSSPUG00000014590	-	96	76.829	ENSPPRG00000007449	-	74	76.712	Panthera_pardus
ENSSPUG00000014590	-	99	100.000	ENSPPRG00000005875	-	98	100.000	Panthera_pardus
ENSSPUG00000014590	-	96	79.268	ENSPTIG00000005117	-	87	76.712	Panthera_tigris_altaica
ENSSPUG00000014590	-	99	100.000	ENSPTIG00000007520	SNRPF	98	100.000	Panthera_tigris_altaica
ENSSPUG00000014590	-	96	80.488	ENSPTRG00000043814	-	81	78.082	Pan_troglodytes
ENSSPUG00000014590	-	91	75.325	ENSPTRG00000047717	-	88	73.973	Pan_troglodytes
ENSSPUG00000014590	-	99	97.619	ENSPKIG00000014784	snrpf	92	97.619	Paramormyrops_kingsleyae
ENSSPUG00000014590	-	99	100.000	ENSPSIG00000016462	SNRPF	98	100.000	Pelodiscus_sinensis
ENSSPUG00000014590	-	99	96.429	ENSPMGG00000023548	snrpf	99	96.429	Periophthalmus_magnuspinnatus
ENSSPUG00000014590	-	99	100.000	ENSPEMG00000023326	Snrpf	98	100.000	Peromyscus_maniculatus_bairdii
ENSSPUG00000014590	-	100	97.647	ENSPLAG00000023932	snrpf	100	97.647	Poecilia_latipinna
ENSSPUG00000014590	-	100	97.647	ENSPMEG00000003377	snrpf	100	97.647	Poecilia_mexicana
ENSSPUG00000014590	-	100	96.471	ENSPREG00000022635	snrpf	98	96.471	Poecilia_reticulata
ENSSPUG00000014590	-	99	100.000	ENSPPYG00000004847	-	98	100.000	Pongo_abelii
ENSSPUG00000014590	-	99	100.000	ENSPCOG00000023833	-	98	100.000	Propithecus_coquereli
ENSSPUG00000014590	-	99	100.000	ENSPVAG00000009036	SNRPF	98	100.000	Pteropus_vampyrus
ENSSPUG00000014590	-	100	97.647	ENSPNYG00000021712	snrpf	100	97.647	Pundamilia_nyererei
ENSSPUG00000014590	-	100	96.471	ENSPNAG00000019117	snrpf	100	96.471	Pygocentrus_nattereri
ENSSPUG00000014590	-	99	100.000	ENSRNOG00000005556	Snrpf	98	100.000	Rattus_norvegicus
ENSSPUG00000014590	-	99	96.429	ENSRBIG00000030414	-	98	96.429	Rhinopithecus_bieti
ENSSPUG00000014590	-	99	96.429	ENSRROG00000021975	-	98	96.429	Rhinopithecus_roxellana
ENSSPUG00000014590	-	82	59.155	YPR182W	SMX3	83	59.155	Saccharomyces_cerevisiae
ENSSPUG00000014590	-	99	98.810	ENSSBOG00000012868	-	98	98.810	Saimiri_boliviensis_boliviensis
ENSSPUG00000014590	-	99	100.000	ENSSBOG00000036179	-	98	100.000	Saimiri_boliviensis_boliviensis
ENSSPUG00000014590	-	86	84.932	ENSSBOG00000032297	-	83	84.932	Saimiri_boliviensis_boliviensis
ENSSPUG00000014590	-	89	79.747	ENSSBOG00000027638	-	89	79.747	Saimiri_boliviensis_boliviensis
ENSSPUG00000014590	-	99	100.000	ENSSHAG00000012294	SNRPF	76	100.000	Sarcophilus_harrisii
ENSSPUG00000014590	-	74	96.825	ENSSFOG00015021523	snrpf	94	96.825	Scleropages_formosus
ENSSPUG00000014590	-	99	96.429	ENSSMAG00000005533	snrpf	97	96.429	Scophthalmus_maximus
ENSSPUG00000014590	-	74	96.825	ENSSDUG00000016283	snrpf	75	96.825	Seriola_dumerili
ENSSPUG00000014590	-	99	97.619	ENSSLDG00000005119	snrpf	98	97.619	Seriola_lalandi_dorsalis
ENSSPUG00000014590	-	93	74.684	ENSSLDG00000003885	-	89	78.082	Seriola_lalandi_dorsalis
ENSSPUG00000014590	-	99	97.619	ENSSPAG00000003283	snrpf	95	97.619	Stegastes_partitus
ENSSPUG00000014590	-	99	100.000	ENSSSCG00000000895	SNRPF	98	100.000	Sus_scrofa
ENSSPUG00000014590	-	68	94.828	ENSTRUG00000014956	snrpf	84	94.828	Takifugu_rubripes
ENSSPUG00000014590	-	99	96.429	ENSTNIG00000012672	snrpf	98	96.429	Tetraodon_nigroviridis
ENSSPUG00000014590	-	86	69.863	ENSTTRG00000006070	SNRPF	85	69.863	Tursiops_truncatus
ENSSPUG00000014590	-	99	100.000	ENSUAMG00000008176	-	98	100.000	Ursus_americanus
ENSSPUG00000014590	-	99	86.905	ENSUAMG00000001101	-	86	89.041	Ursus_americanus
ENSSPUG00000014590	-	99	100.000	ENSUMAG00000003528	-	98	100.000	Ursus_maritimus
ENSSPUG00000014590	-	86	89.041	ENSUMAG00000006177	-	86	89.041	Ursus_maritimus
ENSSPUG00000014590	-	99	100.000	ENSVPAG00000008712	-	98	100.000	Vicugna_pacos
ENSSPUG00000014590	-	89	92.105	ENSVVUG00000023821	-	94	91.781	Vulpes_vulpes
ENSSPUG00000014590	-	86	74.667	ENSXETG00000021630	snrpf	86	72.000	Xenopus_tropicalis
ENSSPUG00000014590	-	100	96.471	ENSXCOG00000013860	snrpf	98	96.471	Xiphophorus_couchianus
ENSSPUG00000014590	-	100	97.647	ENSXMAG00000015448	snrpf	100	97.647	Xiphophorus_maculatus