EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000014803 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 12779 bases
Position: chrQEPC01011341.1:19863697-19876475
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000019223	zf-CCCH	PF00642.24	4.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000020477	-	672	-	ENSSPUP00000019223	223 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000014803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000014803's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000014803	-	97	60.853	ENSSPUG00000003549	CPSF4	96	60.853

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000014803	-	97	64.135	ENSG00000160917	CPSF4	100	86.607	Homo_sapiens
ENSSPUG00000014803	-	57	44.578	ENSAPOG00000004921	cpsf4	93	44.578	Acanthochromis_polyacanthus
ENSSPUG00000014803	-	97	59.690	ENSAMEG00000006252	CPSF4	96	58.915	Ailuropoda_melanoleuca
ENSSPUG00000014803	-	97	61.966	ENSACIG00000009248	cpsf4	95	61.966	Amphilophus_citrinellus
ENSSPUG00000014803	-	97	59.449	ENSAOCG00000019616	cpsf4	96	59.449	Amphiprion_ocellaris
ENSSPUG00000014803	-	97	59.449	ENSAPEG00000011679	cpsf4	96	59.449	Amphiprion_percula
ENSSPUG00000014803	-	97	61.250	ENSATEG00000007010	cpsf4	96	61.250	Anabas_testudineus
ENSSPUG00000014803	-	97	59.302	ENSACAG00000012941	CPSF4	85	59.231	Anolis_carolinensis
ENSSPUG00000014803	-	97	59.690	ENSANAG00000021360	CPSF4	96	59.615	Aotus_nancymaae
ENSSPUG00000014803	-	97	66.359	ENSACLG00000010374	cpsf4	95	66.359	Astatotilapia_calliptera
ENSSPUG00000014803	-	97	57.143	ENSAMXG00000031647	cpsf4	96	57.529	Astyanax_mexicanus
ENSSPUG00000014803	-	97	64.407	ENSBTAG00000002090	CPSF4	95	64.831	Bos_taurus
ENSSPUG00000014803	-	97	60.156	ENSCJAG00000015826	CPSF4	96	60.156	Callithrix_jacchus
ENSSPUG00000014803	-	97	59.690	ENSCAFG00000015036	CPSF4	100	73.964	Canis_familiaris
ENSSPUG00000014803	-	97	54.264	ENSCAFG00020014462	CPSF4	96	54.615	Canis_lupus_dingo
ENSSPUG00000014803	-	97	59.690	ENSCHIG00000014313	CPSF4	96	58.915	Capra_hircus
ENSSPUG00000014803	-	97	64.557	ENSTSYG00000005712	-	95	65.236	Carlito_syrichta
ENSSPUG00000014803	-	97	59.494	ENSTSYG00000014604	-	96	59.916	Carlito_syrichta
ENSSPUG00000014803	-	84	61.058	ENSTSYG00000008195	-	94	61.751	Carlito_syrichta
ENSSPUG00000014803	-	74	57.005	ENSCAPG00000013881	CPSF4	82	56.938	Cavia_aperea
ENSSPUG00000014803	-	97	64.135	ENSCPOG00000001783	CPSF4	95	64.807	Cavia_porcellus
ENSSPUG00000014803	-	97	59.690	ENSCCAG00000028291	CPSF4	96	59.615	Cebus_capucinus
ENSSPUG00000014803	-	97	67.105	ENSCATG00000038440	CPSF4	95	67.105	Cercocebus_atys
ENSSPUG00000014803	-	97	59.690	ENSCLAG00000007050	CPSF4	96	60.000	Chinchilla_lanigera
ENSSPUG00000014803	-	97	59.690	ENSCSAG00000017795	CPSF4	96	59.615	Chlorocebus_sabaeus
ENSSPUG00000014803	-	74	84.337	ENSCPBG00000010269	-	100	84.337	Chrysemys_picta_bellii
ENSSPUG00000014803	-	73	55.610	ENSCPBG00000020869	CPSF4	95	55.610	Chrysemys_picta_bellii
ENSSPUG00000014803	-	100	58.482	ENSCING00000021080	-	97	52.941	Ciona_intestinalis
ENSSPUG00000014803	-	98	57.727	ENSCSAVG00000011469	-	68	57.727	Ciona_savignyi
ENSSPUG00000014803	-	97	67.111	ENSCANG00000019384	CPSF4	95	67.111	Colobus_angolensis_palliatus
ENSSPUG00000014803	-	97	64.135	ENSCGRG00001024184	Cpsf4	95	64.807	Cricetulus_griseus_chok1gshd
ENSSPUG00000014803	-	97	59.690	ENSCGRG00000013892	Cpsf4	96	58.915	Cricetulus_griseus_crigri
ENSSPUG00000014803	-	97	59.055	ENSCSEG00000019055	cpsf4	96	59.055	Cynoglossus_semilaevis
ENSSPUG00000014803	-	98	58.203	ENSCVAG00000016528	cpsf4	97	58.203	Cyprinodon_variegatus
ENSSPUG00000014803	-	97	56.923	ENSDARG00000020217	cpsf4	96	56.154	Danio_rerio
ENSSPUG00000014803	-	97	59.690	ENSDNOG00000006344	CPSF4	96	58.915	Dasypus_novemcinctus
ENSSPUG00000014803	-	73	57.073	ENSDORG00000000742	Cpsf4	94	56.098	Dipodomys_ordii
ENSSPUG00000014803	-	98	55.656	FBgn0015621	Clp	70	55.656	Drosophila_melanogaster
ENSSPUG00000014803	-	74	80.000	ENSETEG00000002608	CPSF4	61	80.000	Echinops_telfairi
ENSSPUG00000014803	-	98	62.553	ENSEBUG00000012552	cpsf4	96	62.553	Eptatretus_burgeri
ENSSPUG00000014803	-	97	64.135	ENSEASG00005002487	CPSF4	95	64.807	Equus_asinus_asinus
ENSSPUG00000014803	-	97	59.690	ENSECAG00000007525	CPSF4	96	58.915	Equus_caballus
ENSSPUG00000014803	-	97	57.854	ENSELUG00000011481	cpsf4	96	57.088	Esox_lucius
ENSSPUG00000014803	-	97	59.690	ENSFCAG00000015070	CPSF4	96	58.915	Felis_catus
ENSSPUG00000014803	-	97	64.831	ENSFALG00000013799	CPSF4	95	64.831	Ficedula_albicollis
ENSSPUG00000014803	-	74	58.721	ENSFALG00000012906	-	100	58.721	Ficedula_albicollis
ENSSPUG00000014803	-	85	59.307	ENSFDAG00000014092	CPSF4	95	59.227	Fukomys_damarensis
ENSSPUG00000014803	-	98	59.375	ENSFHEG00000010880	cpsf4	97	59.375	Fundulus_heteroclitus
ENSSPUG00000014803	-	97	60.729	ENSGMOG00000002330	cpsf4	96	60.729	Gadus_morhua
ENSSPUG00000014803	-	61	34.483	ENSGALG00000004441	-	90	34.483	Gallus_gallus
ENSSPUG00000014803	-	97	64.407	ENSGALG00000004714	CPSF4	95	64.407	Gallus_gallus
ENSSPUG00000014803	-	98	60.156	ENSGAFG00000010580	cpsf4	97	60.156	Gambusia_affinis
ENSSPUG00000014803	-	97	60.324	ENSGACG00000007792	cpsf4	96	60.324	Gasterosteus_aculeatus
ENSSPUG00000014803	-	97	58.915	ENSGAGG00000021835	CPSF4	96	58.915	Gopherus_agassizii
ENSSPUG00000014803	-	81	79.444	ENSGAGG00000020579	-	100	79.444	Gopherus_agassizii
ENSSPUG00000014803	-	97	59.690	ENSGGOG00000015131	CPSF4	96	59.615	Gorilla_gorilla
ENSSPUG00000014803	-	97	59.449	ENSHBUG00000013699	cpsf4	96	59.449	Haplochromis_burtoni
ENSSPUG00000014803	-	97	60.000	ENSHGLG00000017150	CPSF4	96	59.615	Heterocephalus_glaber_female
ENSSPUG00000014803	-	81	58.222	ENSHGLG00100009215	-	95	57.778	Heterocephalus_glaber_male
ENSSPUG00000014803	-	78	52.273	ENSHGLG00100017302	-	81	52.273	Heterocephalus_glaber_male
ENSSPUG00000014803	-	98	60.311	ENSHCOG00000004397	cpsf4	97	60.311	Hippocampus_comes
ENSSPUG00000014803	-	97	56.923	ENSIPUG00000017147	cpsf4	96	56.538	Ictalurus_punctatus
ENSSPUG00000014803	-	97	64.407	ENSSTOG00000001688	CPSF4	95	64.831	Ictidomys_tridecemlineatus
ENSSPUG00000014803	-	97	59.690	ENSJJAG00000019426	Cpsf4	96	60.000	Jaculus_jaculus
ENSSPUG00000014803	-	97	57.480	ENSKMAG00000015642	cpsf4	96	57.480	Kryptolebias_marmoratus
ENSSPUG00000014803	-	99	61.765	ENSLACG00000018470	-	97	61.765	Latimeria_chalumnae
ENSSPUG00000014803	-	97	59.387	ENSLACG00000010938	CPSF4	96	59.387	Latimeria_chalumnae
ENSSPUG00000014803	-	97	56.977	ENSLOCG00000004814	cpsf4	96	56.977	Lepisosteus_oculatus
ENSSPUG00000014803	-	97	58.140	ENSLAFG00000000159	CPSF4	96	59.615	Loxodonta_africana
ENSSPUG00000014803	-	97	67.111	ENSMFAG00000001462	CPSF4	95	67.111	Macaca_fascicularis
ENSSPUG00000014803	-	97	59.690	ENSMMUG00000019191	CPSF4	96	59.615	Macaca_mulatta
ENSSPUG00000014803	-	97	67.111	ENSMNEG00000032306	CPSF4	95	67.111	Macaca_nemestrina
ENSSPUG00000014803	-	97	67.105	ENSMLEG00000034721	CPSF4	95	67.105	Mandrillus_leucophaeus
ENSSPUG00000014803	-	97	58.039	ENSMAMG00000006244	cpsf4	96	58.039	Mastacembelus_armatus
ENSSPUG00000014803	-	97	59.449	ENSMZEG00005007515	cpsf4	96	59.449	Maylandia_zebra
ENSSPUG00000014803	-	82	63.366	ENSMGAG00000004235	CPSF4	95	63.366	Meleagris_gallopavo
ENSSPUG00000014803	-	97	59.690	ENSMAUG00000021253	Cpsf4	96	58.915	Mesocricetus_auratus
ENSSPUG00000014803	-	97	59.690	ENSMICG00000017429	CPSF4	96	59.615	Microcebus_murinus
ENSSPUG00000014803	-	97	59.690	ENSMOCG00000014901	Cpsf4	96	58.915	Microtus_ochrogaster
ENSSPUG00000014803	-	97	59.608	ENSMMOG00000001813	cpsf4	98	70.000	Mola_mola
ENSSPUG00000014803	-	97	58.527	ENSMODG00000001367	CPSF4	96	60.000	Monodelphis_domestica
ENSSPUG00000014803	-	97	58.431	ENSMALG00000012611	cpsf4	96	58.431	Monopterus_albus
ENSSPUG00000014803	-	97	64.407	MGP_CAROLIEiJ_G0028012	Cpsf4	95	64.831	Mus_caroli
ENSSPUG00000014803	-	97	64.407	ENSMUSG00000029625	Cpsf4	95	64.831	Mus_musculus
ENSSPUG00000014803	-	97	64.407	MGP_PahariEiJ_G0024581	Cpsf4	95	64.831	Mus_pahari
ENSSPUG00000014803	-	97	64.407	MGP_SPRETEiJ_G0029013	Cpsf4	95	64.831	Mus_spretus
ENSSPUG00000014803	-	97	59.690	ENSMPUG00000016508	CPSF4	96	58.915	Mustela_putorius_furo
ENSSPUG00000014803	-	82	63.861	ENSMLUG00000010980	CPSF4	95	64.851	Myotis_lucifugus
ENSSPUG00000014803	-	97	59.690	ENSNGAG00000001567	Cpsf4	96	58.915	Nannospalax_galili
ENSSPUG00000014803	-	85	60.793	ENSNBRG00000003943	cpsf4	92	60.793	Neolamprologus_brichardi
ENSSPUG00000014803	-	97	64.135	ENSNLEG00000011074	CPSF4	95	64.807	Nomascus_leucogenys
ENSSPUG00000014803	-	97	58.527	ENSMEUG00000006955	CPSF4	96	60.000	Notamacropus_eugenii
ENSSPUG00000014803	-	97	59.302	ENSOPRG00000013663	CPSF4	96	59.615	Ochotona_princeps
ENSSPUG00000014803	-	97	50.806	ENSODEG00000018283	-	88	54.936	Octodon_degus
ENSSPUG00000014803	-	97	59.690	ENSODEG00000011181	-	96	58.915	Octodon_degus
ENSSPUG00000014803	-	97	48.750	ENSODEG00000009779	-	95	48.750	Octodon_degus
ENSSPUG00000014803	-	97	59.055	ENSONIG00000008495	cpsf4	96	59.055	Oreochromis_niloticus
ENSSPUG00000014803	-	99	53.114	ENSOANG00000009568	-	98	53.114	Ornithorhynchus_anatinus
ENSSPUG00000014803	-	82	59.193	ENSOANG00000007729	CPSF4	95	59.193	Ornithorhynchus_anatinus
ENSSPUG00000014803	-	97	59.690	ENSOCUG00000002437	CPSF4	67	60.000	Oryctolagus_cuniculus
ENSSPUG00000014803	-	97	60.630	ENSORLG00000022798	cpsf4	96	60.630	Oryzias_latipes
ENSSPUG00000014803	-	97	60.630	ENSORLG00020008548	cpsf4	96	60.630	Oryzias_latipes_hni
ENSSPUG00000014803	-	97	60.236	ENSORLG00015019575	cpsf4	96	60.236	Oryzias_latipes_hsok
ENSSPUG00000014803	-	97	59.843	ENSOMEG00000005176	cpsf4	96	59.843	Oryzias_melastigma
ENSSPUG00000014803	-	97	59.690	ENSOGAG00000010884	CPSF4	96	59.615	Otolemur_garnettii
ENSSPUG00000014803	-	97	55.344	ENSOARG00000018668	CPSF4	96	55.344	Ovis_aries
ENSSPUG00000014803	-	97	59.690	ENSPPAG00000043355	CPSF4	96	59.615	Pan_paniscus
ENSSPUG00000014803	-	97	59.690	ENSPPRG00000003134	CPSF4	96	58.915	Panthera_pardus
ENSSPUG00000014803	-	85	60.173	ENSPTIG00000005604	CPSF4	86	60.086	Panthera_tigris_altaica
ENSSPUG00000014803	-	97	59.690	ENSPTRG00000019453	CPSF4	96	59.615	Pan_troglodytes
ENSSPUG00000014803	-	97	67.111	ENSPANG00000023123	CPSF4	95	67.111	Papio_anubis
ENSSPUG00000014803	-	97	56.274	ENSPKIG00000014278	cpsf4	96	56.274	Paramormyrops_kingsleyae
ENSSPUG00000014803	-	77	62.032	ENSPSIG00000018198	-	97	62.032	Pelodiscus_sinensis
ENSSPUG00000014803	-	73	55.610	ENSPSIG00000011229	CPSF4	95	55.610	Pelodiscus_sinensis
ENSSPUG00000014803	-	97	58.590	ENSPMGG00000017735	cpsf4	95	58.590	Periophthalmus_magnuspinnatus
ENSSPUG00000014803	-	97	59.690	ENSPEMG00000004508	Cpsf4	96	58.915	Peromyscus_maniculatus_bairdii
ENSSPUG00000014803	-	97	58.527	ENSPCIG00000024776	CPSF4	96	60.000	Phascolarctos_cinereus
ENSSPUG00000014803	-	98	60.156	ENSPFOG00000014912	cpsf4	97	60.156	Poecilia_formosa
ENSSPUG00000014803	-	98	62.869	ENSPLAG00000009599	cpsf4	96	62.869	Poecilia_latipinna
ENSSPUG00000014803	-	98	60.156	ENSPMEG00000009790	cpsf4	97	60.156	Poecilia_mexicana
ENSSPUG00000014803	-	98	59.289	ENSPREG00000018166	cpsf4	97	59.289	Poecilia_reticulata
ENSSPUG00000014803	-	81	58.296	ENSPPYG00000017378	CPSF4	95	58.222	Pongo_abelii
ENSSPUG00000014803	-	97	57.364	ENSPCAG00000001892	CPSF4	96	58.846	Procavia_capensis
ENSSPUG00000014803	-	97	59.690	ENSPCOG00000012771	CPSF4	96	58.915	Propithecus_coquereli
ENSSPUG00000014803	-	97	53.876	ENSPVAG00000007531	CPSF4	96	53.101	Pteropus_vampyrus
ENSSPUG00000014803	-	97	59.449	ENSPNYG00000018559	cpsf4	96	59.449	Pundamilia_nyererei
ENSSPUG00000014803	-	97	57.197	ENSPNAG00000003736	cpsf4	96	57.471	Pygocentrus_nattereri
ENSSPUG00000014803	-	97	64.407	ENSRNOG00000000985	Cpsf4	95	64.831	Rattus_norvegicus
ENSSPUG00000014803	-	81	58.744	ENSRBIG00000033886	CPSF4	95	58.667	Rhinopithecus_bieti
ENSSPUG00000014803	-	97	64.135	ENSRROG00000040431	CPSF4	95	64.807	Rhinopithecus_roxellana
ENSSPUG00000014803	-	97	59.690	ENSSBOG00000020493	CPSF4	94	63.333	Saimiri_boliviensis_boliviensis
ENSSPUG00000014803	-	97	58.527	ENSSHAG00000011533	CPSF4	96	60.000	Sarcophilus_harrisii
ENSSPUG00000014803	-	97	56.604	ENSSFOG00015007883	cpsf4	96	56.604	Scleropages_formosus
ENSSPUG00000014803	-	97	62.241	ENSSMAG00000006374	cpsf4	95	62.241	Scophthalmus_maximus
ENSSPUG00000014803	-	97	59.216	ENSSDUG00000018887	cpsf4	96	59.216	Seriola_dumerili
ENSSPUG00000014803	-	97	59.216	ENSSLDG00000019078	cpsf4	96	59.216	Seriola_lalandi_dorsalis
ENSSPUG00000014803	-	81	58.744	ENSSARG00000012416	CPSF4	95	58.667	Sorex_araneus
ENSSPUG00000014803	-	97	63.478	ENSSPAG00000006174	cpsf4	95	63.478	Stegastes_partitus
ENSSPUG00000014803	-	97	64.135	ENSSSCG00000026896	CPSF4	95	64.807	Sus_scrofa
ENSSPUG00000014803	-	97	64.286	ENSTGUG00000007552	CPSF4	96	64.286	Taeniopygia_guttata
ENSSPUG00000014803	-	97	59.127	ENSTRUG00000024220	cpsf4	96	59.127	Takifugu_rubripes
ENSSPUG00000014803	-	97	58.730	ENSTNIG00000006265	cpsf4	96	58.730	Tetraodon_nigroviridis
ENSSPUG00000014803	-	81	54.185	ENSTBEG00000011406	CPSF4	95	55.111	Tupaia_belangeri
ENSSPUG00000014803	-	78	77.841	ENSTTRG00000003007	CPSF4	65	77.841	Tursiops_truncatus
ENSSPUG00000014803	-	78	77.841	ENSUAMG00000008051	CPSF4	74	72.396	Ursus_americanus
ENSSPUG00000014803	-	97	64.407	ENSUMAG00000009474	CPSF4	95	64.831	Ursus_maritimus
ENSSPUG00000014803	-	97	64.135	ENSVVUG00000008824	CPSF4	95	65.236	Vulpes_vulpes
ENSSPUG00000014803	-	97	56.716	ENSXETG00000009892	cpsf4	96	56.716	Xenopus_tropicalis
ENSSPUG00000014803	-	99	58.015	ENSXETG00000004641	cpsf4l	97	58.015	Xenopus_tropicalis
ENSSPUG00000014803	-	98	60.156	ENSXCOG00000016040	cpsf4	97	60.156	Xiphophorus_couchianus
ENSSPUG00000014803	-	98	60.156	ENSXMAG00000024670	cpsf4	97	60.156	Xiphophorus_maculatus