EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000014873 (Gene tree)
Gene ID: -
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 33083 bases
Position: chrQEPC01008474.1:532860-565942
Accession: 9784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000019313	MMR_HSR1	PF01926.23	0.00014	1	1
ENSSPUP00000019314	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000020573	RAB5B-202	1834	-	ENSSPUP00000019314	215 (aa)	-	-
ENSSPUT00000020571	RAB5B-201	1875	-	ENSSPUP00000019313	215 (aa)	-	-
ENSSPUT00000020586	RAB5B-203	525	-	ENSSPUP00000019327	174 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000014873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000014873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000014873	RAB5B	93	34.300	ENSSPUG00000003459	-	99	34.300
ENSSPUG00000014873	RAB5B	90	43.299	ENSSPUG00000007945	RAB1B	96	43.299
ENSSPUG00000014873	RAB5B	90	48.454	ENSSPUG00000000017	RAB22A	98	48.454
ENSSPUG00000014873	RAB5B	88	40.000	ENSSPUG00000017677	-	93	39.698
ENSSPUG00000014873	RAB5B	67	35.862	ENSSPUG00000018361	RHEB	84	35.862
ENSSPUG00000014873	RAB5B	69	35.333	ENSSPUG00000007384	RAP2B	89	36.196
ENSSPUG00000014873	RAB5B	90	42.784	ENSSPUG00000012822	RAB1A	95	42.784
ENSSPUG00000014873	RAB5B	75	38.554	ENSSPUG00000005574	RAB33A	72	38.554
ENSSPUG00000014873	RAB5B	73	34.375	ENSSPUG00000014551	RAB36	70	34.375
ENSSPUG00000014873	RAB5B	98	88.152	ENSSPUG00000012950	-	98	88.152
ENSSPUG00000014873	RAB5B	90	34.848	ENSSPUG00000017531	RAB9B	97	34.848
ENSSPUG00000014873	RAB5B	87	87.166	ENSSPUG00000001173	RAB5A	96	87.166
ENSSPUG00000014873	RAB5B	75	44.099	ENSSPUG00000010112	RAB2B	97	38.863
ENSSPUG00000014873	RAB5B	77	40.116	ENSSPUG00000008120	RAB33B	73	40.116
ENSSPUG00000014873	RAB5B	90	38.462	ENSSPUG00000016258	RAB35	96	38.462
ENSSPUG00000014873	RAB5B	75	45.342	ENSSPUG00000018803	RAB14	71	45.342
ENSSPUG00000014873	RAB5B	93	35.294	ENSSPUG00000013564	-	99	35.294
ENSSPUG00000014873	RAB5B	90	41.584	ENSSPUG00000013698	RAB11A	99	41.584
ENSSPUG00000014873	RAB5B	84	35.870	ENSSPUG00000003222	RAB12	72	37.640
ENSSPUG00000014873	RAB5B	55	31.707	ENSSPUG00000007980	ARL8A	62	31.707
ENSSPUG00000014873	RAB5B	91	40.196	ENSSPUG00000002526	-	94	40.196
ENSSPUG00000014873	RAB5B	82	41.808	ENSSPUG00000001533	-	84	41.808
ENSSPUG00000014873	RAB5B	85	34.054	ENSSPUG00000010337	RAB42	82	34.054
ENSSPUG00000014873	RAB5B	58	56.800	ENSSPUG00000015409	RAB17	57	56.800
ENSSPUG00000014873	RAB5B	76	32.727	ENSSPUG00000018789	-	96	31.319
ENSSPUG00000014873	RAB5B	77	30.120	ENSSPUG00000016774	RRAS2	90	30.120
ENSSPUG00000014873	RAB5B	75	43.478	ENSSPUG00000006349	RAB30	79	43.478
ENSSPUG00000014873	RAB5B	69	37.162	ENSSPUG00000006274	RAB23	67	38.125
ENSSPUG00000014873	RAB5B	80	35.673	ENSSPUG00000000617	RAB15	81	35.673
ENSSPUG00000014873	RAB5B	86	35.602	ENSSPUG00000000552	RAB39B	90	35.602
ENSSPUG00000014873	RAB5B	91	38.647	ENSSPUG00000002555	RAB25	99	38.614
ENSSPUG00000014873	RAB5B	91	43.689	ENSSPUG00000002243	-	94	43.689
ENSSPUG00000014873	RAB5B	91	46.939	ENSSPUG00000003439	RAB31	98	46.939
ENSSPUG00000014873	RAB5B	83	31.111	ENSSPUG00000008958	NRAS	94	31.111
ENSSPUG00000014873	RAB5B	90	33.500	ENSSPUG00000015007	RAB29	97	33.500
ENSSPUG00000014873	RAB5B	78	36.310	ENSSPUG00000010896	-	82	36.310
ENSSPUG00000014873	RAB5B	77	41.989	ENSSPUG00000004262	RAB7A	87	41.989
ENSSPUG00000014873	RAB5B	77	45.181	ENSSPUG00000017301	RAB6A	80	45.181
ENSSPUG00000014873	RAB5B	82	32.787	ENSSPUG00000005243	HRAS	96	32.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000014873	RAB5B	100	96.279	ENSG00000111540	RAB5B	100	97.391	Homo_sapiens
ENSSPUG00000014873	RAB5B	100	94.931	ENSAMEG00000003196	RAB5B	100	94.931	Ailuropoda_melanoleuca
ENSSPUG00000014873	RAB5B	100	98.605	ENSACAG00000005380	RAB5B	100	98.605	Anolis_carolinensis
ENSSPUG00000014873	RAB5B	100	96.279	ENSANAG00000033215	RAB5B	95	96.279	Aotus_nancymaae
ENSSPUG00000014873	RAB5B	100	96.279	ENSBTAG00000014129	RAB5B	100	96.279	Bos_taurus
ENSSPUG00000014873	RAB5B	100	96.279	ENSCJAG00000041780	RAB5B	95	96.279	Callithrix_jacchus
ENSSPUG00000014873	RAB5B	100	96.279	ENSCAFG00000000087	RAB5B	100	96.279	Canis_familiaris
ENSSPUG00000014873	RAB5B	100	96.279	ENSCAFG00020026094	RAB5B	100	96.279	Canis_lupus_dingo
ENSSPUG00000014873	RAB5B	98	96.209	ENSCHIG00000010333	RAB5B	98	96.209	Capra_hircus
ENSSPUG00000014873	RAB5B	100	96.744	ENSTSYG00000009576	RAB5B	100	96.744	Carlito_syrichta
ENSSPUG00000014873	RAB5B	100	96.279	ENSCPOG00000034818	RAB5B	100	96.279	Cavia_porcellus
ENSSPUG00000014873	RAB5B	100	95.349	ENSCCAG00000019480	RAB5B	100	95.349	Cebus_capucinus
ENSSPUG00000014873	RAB5B	83	97.207	ENSCATG00000034978	RAB5B	98	97.207	Cercocebus_atys
ENSSPUG00000014873	RAB5B	100	95.349	ENSCSAG00000005277	RAB5B	100	95.349	Chlorocebus_sabaeus
ENSSPUG00000014873	RAB5B	100	97.674	ENSCPBG00000012712	RAB5B	100	97.674	Chrysemys_picta_bellii
ENSSPUG00000014873	RAB5B	100	96.744	ENSCGRG00001000428	Rab5b	100	96.744	Cricetulus_griseus_chok1gshd
ENSSPUG00000014873	RAB5B	100	96.744	ENSCGRG00000009508	-	100	96.744	Cricetulus_griseus_crigri
ENSSPUG00000014873	RAB5B	100	96.279	ENSDORG00000025063	Rab5b	100	96.279	Dipodomys_ordii
ENSSPUG00000014873	RAB5B	100	96.279	ENSECAG00000023306	RAB5B	100	96.279	Equus_caballus
ENSSPUG00000014873	RAB5B	100	95.349	ENSEEUG00000006745	RAB5B	100	95.349	Erinaceus_europaeus
ENSSPUG00000014873	RAB5B	100	96.279	ENSFDAG00000008326	RAB5B	100	96.279	Fukomys_damarensis
ENSSPUG00000014873	RAB5B	100	95.349	ENSHGLG00000005995	RAB5B	100	95.349	Heterocephalus_glaber_female
ENSSPUG00000014873	RAB5B	100	95.349	ENSHGLG00100012955	RAB5B	100	95.349	Heterocephalus_glaber_male
ENSSPUG00000014873	RAB5B	100	94.884	ENSSTOG00000010536	RAB5B	100	94.884	Ictidomys_tridecemlineatus
ENSSPUG00000014873	RAB5B	100	96.279	ENSJJAG00000019506	Rab5b	100	96.279	Jaculus_jaculus
ENSSPUG00000014873	RAB5B	100	95.392	ENSLAFG00000018009	RAB5B	95	95.392	Loxodonta_africana
ENSSPUG00000014873	RAB5B	100	95.349	ENSMFAG00000029992	RAB5B	100	95.349	Macaca_fascicularis
ENSSPUG00000014873	RAB5B	100	95.349	ENSMMUG00000031853	RAB5B	100	95.349	Macaca_mulatta
ENSSPUG00000014873	RAB5B	100	95.349	ENSMNEG00000005338	RAB5B	100	95.349	Macaca_nemestrina
ENSSPUG00000014873	RAB5B	100	95.349	ENSMLEG00000034462	RAB5B	100	95.349	Mandrillus_leucophaeus
ENSSPUG00000014873	RAB5B	100	96.279	ENSMAUG00000011613	Rab5b	100	96.279	Mesocricetus_auratus
ENSSPUG00000014873	RAB5B	100	95.814	ENSMICG00000011086	RAB5B	100	95.814	Microcebus_murinus
ENSSPUG00000014873	RAB5B	100	96.279	ENSMUSG00000000711	Rab5b	100	96.279	Mus_musculus
ENSSPUG00000014873	RAB5B	100	96.279	MGP_PahariEiJ_G0031135	Rab5b	100	96.279	Mus_pahari
ENSSPUG00000014873	RAB5B	100	95.814	MGP_SPRETEiJ_G0016774	Rab5b	100	95.814	Mus_spretus
ENSSPUG00000014873	RAB5B	99	94.907	ENSMPUG00000000946	RAB5B	89	94.907	Mustela_putorius_furo
ENSSPUG00000014873	RAB5B	100	96.279	ENSNLEG00000017570	-	100	96.279	Nomascus_leucogenys
ENSSPUG00000014873	RAB5B	100	96.279	ENSOPRG00000007883	RAB5B	100	96.279	Ochotona_princeps
ENSSPUG00000014873	RAB5B	100	95.814	ENSODEG00000003860	RAB5B	100	95.814	Octodon_degus
ENSSPUG00000014873	RAB5B	100	96.279	ENSOCUG00000013895	RAB5B	95	96.279	Oryctolagus_cuniculus
ENSSPUG00000014873	RAB5B	100	96.279	ENSOARG00000010651	RAB5B	95	96.279	Ovis_aries
ENSSPUG00000014873	RAB5B	100	96.279	ENSPPAG00000035431	RAB5B	100	96.279	Pan_paniscus
ENSSPUG00000014873	RAB5B	100	96.279	ENSPTRG00000005071	RAB5B	98	96.682	Pan_troglodytes
ENSSPUG00000014873	RAB5B	99	94.393	ENSPANG00000021075	RAB5B	97	94.393	Papio_anubis
ENSSPUG00000014873	RAB5B	100	96.279	ENSPCOG00000016461	RAB5B	100	96.279	Propithecus_coquereli
ENSSPUG00000014873	RAB5B	100	95.814	ENSRNOG00000006130	Rab5b	100	95.814	Rattus_norvegicus
ENSSPUG00000014873	RAB5B	100	95.349	ENSRBIG00000013165	RAB5B	100	95.349	Rhinopithecus_bieti
ENSSPUG00000014873	RAB5B	100	95.349	ENSRROG00000037973	RAB5B	100	95.349	Rhinopithecus_roxellana
ENSSPUG00000014873	RAB5B	100	81.395	ENSSBOG00000035419	RAB5B	100	81.395	Saimiri_boliviensis_boliviensis
ENSSPUG00000014873	RAB5B	100	96.279	ENSSHAG00000007727	RAB5B	100	96.279	Sarcophilus_harrisii
ENSSPUG00000014873	RAB5B	100	96.279	ENSSARG00000006237	RAB5B	100	96.279	Sorex_araneus
ENSSPUG00000014873	RAB5B	100	96.279	ENSTTRG00000015001	RAB5B	100	96.279	Tursiops_truncatus
ENSSPUG00000014873	RAB5B	100	95.814	ENSUAMG00000014651	RAB5B	100	95.814	Ursus_americanus
ENSSPUG00000014873	RAB5B	100	95.814	ENSUMAG00000016263	RAB5B	100	95.814	Ursus_maritimus
ENSSPUG00000014873	RAB5B	68	97.260	ENSVVUG00000022054	RAB5B	81	97.260	Vulpes_vulpes