EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000015219 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 209337 bases
Position: chrQEPC01000281.1:933740-1143076
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000019761	RRM_1	PF00076.22	1.3e-09	1	1
ENSSPUP00000019749	RRM_1	PF00076.22	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000021037	SCAF8-201	5353	-	ENSSPUP00000019749	1322 (aa)	-	-
ENSSPUT00000021049	SCAF8-202	5131	-	ENSSPUP00000019761	1248 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000015219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000015219's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000015219	SCAF8	100	77.946	ENSG00000213079	SCAF8	100	77.660	Homo_sapiens
ENSSPUG00000015219	SCAF8	79	77.762	ENSAPOG00000015527	SCAF8	74	73.037	Acanthochromis_polyacanthus
ENSSPUG00000015219	SCAF8	100	76.523	ENSAMEG00000007583	SCAF8	97	76.672	Ailuropoda_melanoleuca
ENSSPUG00000015219	SCAF8	79	77.905	ENSAOCG00000002421	SCAF8	76	70.347	Amphiprion_ocellaris
ENSSPUG00000015219	SCAF8	80	74.711	ENSATEG00000006959	SCAF8	97	67.370	Anabas_testudineus
ENSSPUG00000015219	SCAF8	100	84.215	ENSAPLG00000005765	SCAF8	100	84.592	Anas_platyrhynchos
ENSSPUG00000015219	SCAF8	99	80.000	ENSACAG00000005282	SCAF8	99	80.000	Anolis_carolinensis
ENSSPUG00000015219	SCAF8	100	78.021	ENSANAG00000036184	SCAF8	100	77.870	Aotus_nancymaae
ENSSPUG00000015219	SCAF8	82	70.186	ENSACLG00000018828	SCAF8	80	70.186	Astatotilapia_calliptera
ENSSPUG00000015219	SCAF8	100	77.585	ENSBTAG00000031917	SCAF8	100	77.509	Bos_taurus
ENSSPUG00000015219	SCAF8	100	77.887	ENSCJAG00000012631	SCAF8	97	76.654	Callithrix_jacchus
ENSSPUG00000015219	SCAF8	99	77.845	ENSCAFG00000000570	SCAF8	99	77.693	Canis_familiaris
ENSSPUG00000015219	SCAF8	99	77.828	ENSCAFG00020015048	SCAF8	99	77.668	Canis_lupus_dingo
ENSSPUG00000015219	SCAF8	100	77.585	ENSCHIG00000025041	SCAF8	100	77.434	Capra_hircus
ENSSPUG00000015219	SCAF8	99	76.976	ENSTSYG00000010991	SCAF8	97	76.824	Carlito_syrichta
ENSSPUG00000015219	SCAF8	63	89.655	ENSCAPG00000003300	SCAF8	86	89.407	Cavia_aperea
ENSSPUG00000015219	SCAF8	100	67.345	ENSCPOG00000030311	-	100	65.361	Cavia_porcellus
ENSSPUG00000015219	SCAF8	99	68.788	ENSCPOG00000022216	-	99	69.674	Cavia_porcellus
ENSSPUG00000015219	SCAF8	100	77.660	ENSCCAG00000024952	SCAF8	100	77.644	Cebus_capucinus
ENSSPUG00000015219	SCAF8	100	77.946	ENSCATG00000035361	SCAF8	100	77.962	Cercocebus_atys
ENSSPUG00000015219	SCAF8	100	76.528	ENSCLAG00000004910	SCAF8	100	76.976	Chinchilla_lanigera
ENSSPUG00000015219	SCAF8	100	76.877	ENSCSAG00000013430	SCAF8	100	76.597	Chlorocebus_sabaeus
ENSSPUG00000015219	SCAF8	98	94.760	ENSCPBG00000016330	SCAF8	100	86.672	Chrysemys_picta_bellii
ENSSPUG00000015219	SCAF8	100	77.795	ENSCANG00000039499	SCAF8	99	77.338	Colobus_angolensis_palliatus
ENSSPUG00000015219	SCAF8	100	76.244	ENSCGRG00001020167	Scaf8	100	76.244	Cricetulus_griseus_chok1gshd
ENSSPUG00000015219	SCAF8	99	76.006	ENSCGRG00000004120	Scaf8	99	76.006	Cricetulus_griseus_crigri
ENSSPUG00000015219	SCAF8	82	64.144	ENSCSEG00000000043	-	78	69.603	Cynoglossus_semilaevis
ENSSPUG00000015219	SCAF8	82	70.909	ENSCVAG00000000925	SCAF8	77	70.629	Cyprinodon_variegatus
ENSSPUG00000015219	SCAF8	96	72.327	ENSDNOG00000025271	SCAF8	100	75.708	Dasypus_novemcinctus
ENSSPUG00000015219	SCAF8	99	76.248	ENSDORG00000006391	Scaf8	100	76.324	Dipodomys_ordii
ENSSPUG00000015219	SCAF8	100	77.132	ENSEASG00005018879	SCAF8	100	77.225	Equus_asinus_asinus
ENSSPUG00000015219	SCAF8	100	77.341	ENSECAG00000005540	SCAF8	100	77.434	Equus_caballus
ENSSPUG00000015219	SCAF8	78	70.000	ENSELUG00000002779	SCAF8	73	69.430	Esox_lucius
ENSSPUG00000015219	SCAF8	100	77.946	ENSFCAG00000023424	SCAF8	100	77.866	Felis_catus
ENSSPUG00000015219	SCAF8	100	84.940	ENSFALG00000012433	SCAF8	100	84.940	Ficedula_albicollis
ENSSPUG00000015219	SCAF8	100	76.621	ENSFDAG00000010335	SCAF8	100	76.471	Fukomys_damarensis
ENSSPUG00000015219	SCAF8	83	69.259	ENSFHEG00000008284	SCAF8	77	69.221	Fundulus_heteroclitus
ENSSPUG00000015219	SCAF8	55	69.408	ENSGMOG00000018812	SCAF8	62	75.762	Gadus_morhua
ENSSPUG00000015219	SCAF8	99	85.129	ENSGALG00000013635	SCAF8	98	85.053	Gallus_gallus
ENSSPUG00000015219	SCAF8	83	73.377	ENSGAFG00000018033	SCAF8	71	77.378	Gambusia_affinis
ENSSPUG00000015219	SCAF8	83	65.513	ENSGACG00000006909	SCAF8	93	72.349	Gasterosteus_aculeatus
ENSSPUG00000015219	SCAF8	64	81.425	ENSGAGG00000017820	-	88	82.222	Gopherus_agassizii
ENSSPUG00000015219	SCAF8	100	77.946	ENSGGOG00000008645	SCAF8	100	77.660	Gorilla_gorilla
ENSSPUG00000015219	SCAF8	82	70.311	ENSHBUG00000019537	SCAF8	80	70.311	Haplochromis_burtoni
ENSSPUG00000015219	SCAF8	100	76.998	ENSHGLG00000003619	SCAF8	100	77.225	Heterocephalus_glaber_female
ENSSPUG00000015219	SCAF8	100	76.395	ENSHGLG00100004708	SCAF8	100	77.052	Heterocephalus_glaber_male
ENSSPUG00000015219	SCAF8	99	77.449	ENSSTOG00000026043	SCAF8	99	77.390	Ictidomys_tridecemlineatus
ENSSPUG00000015219	SCAF8	100	75.641	ENSJJAG00000020480	Scaf8	100	75.716	Jaculus_jaculus
ENSSPUG00000015219	SCAF8	79	77.299	ENSKMAG00000012767	SCAF8	71	77.826	Kryptolebias_marmoratus
ENSSPUG00000015219	SCAF8	70	77.037	ENSLBEG00000012484	-	64	77.731	Labrus_bergylta
ENSSPUG00000015219	SCAF8	83	75.732	ENSLACG00000001394	SCAF8	99	76.485	Latimeria_chalumnae
ENSSPUG00000015219	SCAF8	87	75.360	ENSLOCG00000016856	SCAF8	94	74.705	Lepisosteus_oculatus
ENSSPUG00000015219	SCAF8	100	76.604	ENSLAFG00000000022	SCAF8	100	76.714	Loxodonta_africana
ENSSPUG00000015219	SCAF8	100	78.097	ENSMFAG00000032738	SCAF8	100	77.811	Macaca_fascicularis
ENSSPUG00000015219	SCAF8	100	78.097	ENSMMUG00000015163	SCAF8	100	77.811	Macaca_mulatta
ENSSPUG00000015219	SCAF8	100	78.097	ENSMNEG00000043466	SCAF8	100	77.811	Macaca_nemestrina
ENSSPUG00000015219	SCAF8	99	77.778	ENSMLEG00000034845	SCAF8	99	77.643	Mandrillus_leucophaeus
ENSSPUG00000015219	SCAF8	79	67.589	ENSMAMG00000009457	SCAF8	76	67.194	Mastacembelus_armatus
ENSSPUG00000015219	SCAF8	82	70.186	ENSMZEG00005005698	SCAF8	80	70.186	Maylandia_zebra
ENSSPUG00000015219	SCAF8	99	84.714	ENSMGAG00000012762	SCAF8	100	84.639	Meleagris_gallopavo
ENSSPUG00000015219	SCAF8	99	75.456	ENSMAUG00000009513	Scaf8	100	75.380	Mesocricetus_auratus
ENSSPUG00000015219	SCAF8	100	77.526	ENSMICG00000028965	SCAF8	100	77.225	Microcebus_murinus
ENSSPUG00000015219	SCAF8	100	76.244	ENSMOCG00000014950	Scaf8	100	76.244	Microtus_ochrogaster
ENSSPUG00000015219	SCAF8	81	65.605	ENSMMOG00000002216	SCAF8	78	65.096	Mola_mola
ENSSPUG00000015219	SCAF8	99	80.395	ENSMODG00000008301	SCAF8	99	80.243	Monodelphis_domestica
ENSSPUG00000015219	SCAF8	82	70.173	ENSMALG00000011584	SCAF8	78	70.173	Monopterus_albus
ENSSPUG00000015219	SCAF8	100	75.774	MGP_CAROLIEiJ_G0021016	Scaf8	100	75.472	Mus_caroli
ENSSPUG00000015219	SCAF8	100	75.623	ENSMUSG00000046201	Scaf8	100	75.321	Mus_musculus
ENSSPUG00000015219	SCAF8	100	76.075	MGP_PahariEiJ_G0023334	Scaf8	100	75.774	Mus_pahari
ENSSPUG00000015219	SCAF8	100	76.654	ENSMPUG00000001974	SCAF8	100	76.729	Mustela_putorius_furo
ENSSPUG00000015219	SCAF8	100	76.151	ENSMLUG00000029190	SCAF8	100	75.849	Myotis_lucifugus
ENSSPUG00000015219	SCAF8	100	76.395	ENSNGAG00000012332	Scaf8	100	76.395	Nannospalax_galili
ENSSPUG00000015219	SCAF8	87	73.104	ENSNBRG00000009067	SCAF8	96	69.160	Neolamprologus_brichardi
ENSSPUG00000015219	SCAF8	100	77.016	ENSNLEG00000015509	SCAF8	99	76.320	Nomascus_leucogenys
ENSSPUG00000015219	SCAF8	71	83.186	ENSOPRG00000018413	-	77	83.000	Ochotona_princeps
ENSSPUG00000015219	SCAF8	100	76.923	ENSODEG00000007296	SCAF8	100	76.940	Octodon_degus
ENSSPUG00000015219	SCAF8	92	68.144	ENSONIG00000008119	SCAF8	95	73.464	Oreochromis_niloticus
ENSSPUG00000015219	SCAF8	99	77.693	ENSOCUG00000026063	SCAF8	99	77.238	Oryctolagus_cuniculus
ENSSPUG00000015219	SCAF8	79	71.990	ENSORLG00000017358	SCAF8	75	72.382	Oryzias_latipes
ENSSPUG00000015219	SCAF8	79	71.990	ENSORLG00020002214	SCAF8	75	72.382	Oryzias_latipes_hni
ENSSPUG00000015219	SCAF8	79	76.471	ENSORLG00015015779	SCAF8	75	72.513	Oryzias_latipes_hsok
ENSSPUG00000015219	SCAF8	82	69.479	ENSOMEG00000015471	SCAF8	77	72.775	Oryzias_melastigma
ENSSPUG00000015219	SCAF8	100	75.854	ENSOGAG00000034223	SCAF8	97	75.706	Otolemur_garnettii
ENSSPUG00000015219	SCAF8	99	77.280	ENSOARG00000004159	SCAF8	100	77.128	Ovis_aries
ENSSPUG00000015219	SCAF8	100	77.870	ENSPPAG00000039826	SCAF8	100	77.660	Pan_paniscus
ENSSPUG00000015219	SCAF8	100	77.870	ENSPPRG00000023175	SCAF8	100	77.719	Panthera_pardus
ENSSPUG00000015219	SCAF8	99	77.660	ENSPTIG00000014836	SCAF8	100	77.508	Panthera_tigris_altaica
ENSSPUG00000015219	SCAF8	100	77.870	ENSPTRG00000018727	SCAF8	100	77.660	Pan_troglodytes
ENSSPUG00000015219	SCAF8	100	78.021	ENSPANG00000017489	SCAF8	100	76.000	Papio_anubis
ENSSPUG00000015219	SCAF8	91	74.869	ENSPKIG00000021212	SCAF8	100	74.346	Paramormyrops_kingsleyae
ENSSPUG00000015219	SCAF8	86	94.107	ENSPSIG00000008614	SCAF8	99	83.931	Pelodiscus_sinensis
ENSSPUG00000015219	SCAF8	99	75.988	ENSPEMG00000010531	Scaf8	100	75.988	Peromyscus_maniculatus_bairdii
ENSSPUG00000015219	SCAF8	100	80.755	ENSPCIG00000001141	SCAF8	100	80.755	Phascolarctos_cinereus
ENSSPUG00000015219	SCAF8	86	77.143	ENSPFOG00000004176	SCAF8	90	72.775	Poecilia_formosa
ENSSPUG00000015219	SCAF8	82	69.851	ENSPLAG00000021432	SCAF8	75	72.906	Poecilia_latipinna
ENSSPUG00000015219	SCAF8	76	76.506	ENSPMEG00000007591	SCAF8	84	68.961	Poecilia_mexicana
ENSSPUG00000015219	SCAF8	82	69.479	ENSPREG00000000652	SCAF8	77	69.479	Poecilia_reticulata
ENSSPUG00000015219	SCAF8	100	76.546	ENSPPYG00000017121	SCAF8	100	76.036	Pongo_abelii
ENSSPUG00000015219	SCAF8	86	92.140	ENSPCAG00000013044	SCAF8	90	92.308	Procavia_capensis
ENSSPUG00000015219	SCAF8	100	77.753	ENSPCOG00000002067	SCAF8	99	77.432	Propithecus_coquereli
ENSSPUG00000015219	SCAF8	99	75.268	ENSPVAG00000005582	SCAF8	100	75.115	Pteropus_vampyrus
ENSSPUG00000015219	SCAF8	82	70.186	ENSPNYG00000007277	SCAF8	80	70.186	Pundamilia_nyererei
ENSSPUG00000015219	SCAF8	84	63.956	ENSPNAG00000024740	SCAF8	82	69.355	Pygocentrus_nattereri
ENSSPUG00000015219	SCAF8	100	76.226	ENSRNOG00000016919	Scaf8	100	76.226	Rattus_norvegicus
ENSSPUG00000015219	SCAF8	100	77.870	ENSRBIG00000035769	SCAF8	100	77.585	Rhinopithecus_bieti
ENSSPUG00000015219	SCAF8	100	77.795	ENSRROG00000013580	SCAF8	100	77.509	Rhinopithecus_roxellana
ENSSPUG00000015219	SCAF8	100	77.585	ENSSBOG00000027023	SCAF8	100	77.795	Saimiri_boliviensis_boliviensis
ENSSPUG00000015219	SCAF8	100	80.166	ENSSHAG00000009915	SCAF8	100	80.015	Sarcophilus_harrisii
ENSSPUG00000015219	SCAF8	86	66.571	ENSSFOG00015009481	SCAF8	80	78.723	Scleropages_formosus
ENSSPUG00000015219	SCAF8	79	77.077	ENSSMAG00000008275	SCAF8	77	77.312	Scophthalmus_maximus
ENSSPUG00000015219	SCAF8	100	78.172	ENSSSCG00000004070	SCAF8	100	77.929	Sus_scrofa
ENSSPUG00000015219	SCAF8	99	84.878	ENSTGUG00000011151	SCAF8	100	85.095	Taeniopygia_guttata
ENSSPUG00000015219	SCAF8	82	68.238	ENSTRUG00000009243	SCAF8	78	68.114	Takifugu_rubripes
ENSSPUG00000015219	SCAF8	83	66.626	ENSTNIG00000016885	SCAF8	99	66.218	Tetraodon_nigroviridis
ENSSPUG00000015219	SCAF8	99	77.093	ENSTTRG00000014538	SCAF8	100	76.882	Tursiops_truncatus
ENSSPUG00000015219	SCAF8	100	77.585	ENSUAMG00000024736	SCAF8	99	77.567	Ursus_americanus
ENSSPUG00000015219	SCAF8	98	77.231	ENSUMAG00000013404	SCAF8	100	77.385	Ursus_maritimus
ENSSPUG00000015219	SCAF8	71	74.971	ENSVPAG00000012465	SCAF8	99	73.356	Vicugna_pacos
ENSSPUG00000015219	SCAF8	99	77.828	ENSVVUG00000007532	SCAF8	100	77.769	Vulpes_vulpes
ENSSPUG00000015219	SCAF8	86	80.116	ENSXETG00000013132	scaf8	84	79.826	Xenopus_tropicalis
ENSSPUG00000015219	SCAF8	82	69.355	ENSXMAG00000019192	SCAF8	78	69.355	Xiphophorus_maculatus