EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000015298 (Gene tree)
Gene ID: -
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 35127 bases
Position: chrQEPC01001423.1:6320897-6356023
Accession: 13071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000019889	zf-C2H2	PF00096.26	1.4e-27	1	5
ENSSPUP00000019889	zf-C2H2	PF00096.26	1.4e-27	2	5
ENSSPUP00000019889	zf-C2H2	PF00096.26	1.4e-27	3	5
ENSSPUP00000019889	zf-C2H2	PF00096.26	1.4e-27	4	5
ENSSPUP00000019889	zf-C2H2	PF00096.26	1.4e-27	5	5
ENSSPUP00000019885	zf-C2H2	PF00096.26	1.4e-26	1	5
ENSSPUP00000019885	zf-C2H2	PF00096.26	1.4e-26	2	5
ENSSPUP00000019885	zf-C2H2	PF00096.26	1.4e-26	3	5
ENSSPUP00000019885	zf-C2H2	PF00096.26	1.4e-26	4	5
ENSSPUP00000019885	zf-C2H2	PF00096.26	1.4e-26	5	5
ENSSPUP00000019893	zf-C2H2	PF00096.26	3.2e-20	1	4
ENSSPUP00000019893	zf-C2H2	PF00096.26	3.2e-20	2	4
ENSSPUP00000019893	zf-C2H2	PF00096.26	3.2e-20	3	4
ENSSPUP00000019893	zf-C2H2	PF00096.26	3.2e-20	4	4
ENSSPUP00000019889	zf-met	PF12874.7	2.2e-11	1	1
ENSSPUP00000019885	zf-met	PF12874.7	4.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000021188	PATZ1-202	3644	-	ENSSPUP00000019889	700 (aa)	-	-
ENSSPUT00000021183	PATZ1-201	3716	-	ENSSPUP00000019885	724 (aa)	-	-
ENSSPUT00000021192	PATZ1-203	3578	-	ENSSPUP00000019893	678 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000015298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000015298's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000015298	PATZ1	53	35.849	ENSSPUG00000009764	-	61	35.849
ENSSPUG00000015298	PATZ1	60	42.857	ENSSPUG00000011070	BCL6	55	42.857
ENSSPUG00000015298	PATZ1	51	41.176	ENSSPUG00000000136	-	88	41.176
ENSSPUG00000015298	PATZ1	52	31.746	ENSSPUG00000009941	PRDM5	81	31.518
ENSSPUG00000015298	PATZ1	54	46.479	ENSSPUG00000010059	-	78	46.479
ENSSPUG00000015298	PATZ1	53	40.217	ENSSPUG00000007147	-	91	40.217
ENSSPUG00000015298	PATZ1	50	35.616	ENSSPUG00000009898	-	88	34.503
ENSSPUG00000015298	PATZ1	73	37.963	ENSSPUG00000010087	ZBTB14	91	38.889
ENSSPUG00000015298	PATZ1	50	32.192	ENSSPUG00000001341	ZBTB44	56	30.822
ENSSPUG00000015298	PATZ1	87	37.634	ENSSPUG00000014346	MYNN	99	36.145
ENSSPUG00000015298	PATZ1	50	37.255	ENSSPUG00000018867	-	92	37.255
ENSSPUG00000015298	PATZ1	57	33.333	ENSSPUG00000013355	PRDM15	50	33.333
ENSSPUG00000015298	PATZ1	51	31.602	ENSSPUG00000010016	-	94	32.192
ENSSPUG00000015298	PATZ1	51	37.963	ENSSPUG00000000709	ZNF236	59	37.963
ENSSPUG00000015298	PATZ1	50	33.476	ENSSPUG00000007064	-	98	33.476
ENSSPUG00000015298	PATZ1	50	32.850	ENSSPUG00000000229	-	87	34.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000015298	PATZ1	100	86.629	ENSG00000100105	PATZ1	100	87.055	Homo_sapiens
ENSSPUG00000015298	PATZ1	96	58.148	ENSAPOG00000018447	patz1	99	59.266	Acanthochromis_polyacanthus
ENSSPUG00000015298	PATZ1	100	86.202	ENSAMEG00000007074	PATZ1	100	87.055	Ailuropoda_melanoleuca
ENSSPUG00000015298	PATZ1	97	56.776	ENSACIG00000016779	patz1	99	58.792	Amphilophus_citrinellus
ENSSPUG00000015298	PATZ1	97	57.850	ENSAPEG00000013354	patz1	99	57.345	Amphiprion_percula
ENSSPUG00000015298	PATZ1	97	57.532	ENSATEG00000011260	patz1	99	57.245	Anabas_testudineus
ENSSPUG00000015298	PATZ1	83	95.704	ENSAPLG00000003934	PATZ1	99	95.704	Anas_platyrhynchos
ENSSPUG00000015298	PATZ1	100	86.629	ENSANAG00000029603	PATZ1	100	87.055	Aotus_nancymaae
ENSSPUG00000015298	PATZ1	96	61.321	ENSAMXG00000002273	patz1	98	61.321	Astyanax_mexicanus
ENSSPUG00000015298	PATZ1	100	86.060	ENSBTAG00000005478	PATZ1	100	86.913	Bos_taurus
ENSSPUG00000015298	PATZ1	100	86.629	ENSCJAG00000010978	PATZ1	100	87.055	Callithrix_jacchus
ENSSPUG00000015298	PATZ1	100	86.202	ENSCAFG00000013087	PATZ1	100	87.055	Canis_familiaris
ENSSPUG00000015298	PATZ1	100	85.775	ENSCHIG00000020203	PATZ1	100	86.629	Capra_hircus
ENSSPUG00000015298	PATZ1	100	86.629	ENSTSYG00000033183	PATZ1	100	87.055	Carlito_syrichta
ENSSPUG00000015298	PATZ1	100	86.629	ENSCCAG00000028772	PATZ1	100	87.055	Cebus_capucinus
ENSSPUG00000015298	PATZ1	100	87.234	ENSCATG00000006101	PATZ1	100	87.055	Cercocebus_atys
ENSSPUG00000015298	PATZ1	100	94.571	ENSCPBG00000011277	PATZ1	100	94.571	Chrysemys_picta_bellii
ENSSPUG00000015298	PATZ1	100	87.234	ENSCANG00000024972	PATZ1	100	87.055	Colobus_angolensis_palliatus
ENSSPUG00000015298	PATZ1	100	84.922	ENSCGRG00001004071	Patz1	100	85.206	Cricetulus_griseus_chok1gshd
ENSSPUG00000015298	PATZ1	91	87.752	ENSCGRG00000004814	Patz1	100	87.907	Cricetulus_griseus_crigri
ENSSPUG00000015298	PATZ1	97	54.866	ENSCSEG00000001385	patz1	99	54.545	Cynoglossus_semilaevis
ENSSPUG00000015298	PATZ1	97	56.863	ENSCVAG00000007684	patz1	99	56.863	Cyprinodon_variegatus
ENSSPUG00000015298	PATZ1	95	57.336	ENSDARG00000076584	patz1	98	55.588	Danio_rerio
ENSSPUG00000015298	PATZ1	90	84.882	ENSDNOG00000003183	PATZ1	100	85.827	Dasypus_novemcinctus
ENSSPUG00000015298	PATZ1	100	86.344	ENSDORG00000023834	Patz1	100	87.198	Dipodomys_ordii
ENSSPUG00000015298	PATZ1	100	86.629	ENSECAG00000025030	PATZ1	100	86.913	Equus_caballus
ENSSPUG00000015298	PATZ1	97	59.099	ENSELUG00000002333	patz1	99	58.752	Esox_lucius
ENSSPUG00000015298	PATZ1	100	86.202	ENSFCAG00000030253	PATZ1	100	87.055	Felis_catus
ENSSPUG00000015298	PATZ1	84	95.918	ENSFALG00000007450	PATZ1	100	95.918	Ficedula_albicollis
ENSSPUG00000015298	PATZ1	95	84.132	ENSFDAG00000005614	PATZ1	100	85.285	Fukomys_damarensis
ENSSPUG00000015298	PATZ1	97	56.620	ENSFHEG00000014755	patz1	99	56.056	Fundulus_heteroclitus
ENSSPUG00000015298	PATZ1	95	55.777	ENSGMOG00000001062	patz1	97	55.367	Gadus_morhua
ENSSPUG00000015298	PATZ1	100	91.619	ENSGALG00000006934	PATZ1	100	91.619	Gallus_gallus
ENSSPUG00000015298	PATZ1	97	56.203	ENSGAFG00000010053	patz1	99	54.793	Gambusia_affinis
ENSSPUG00000015298	PATZ1	84	96.694	ENSGAGG00000003214	PATZ1	100	97.074	Gopherus_agassizii
ENSSPUG00000015298	PATZ1	100	86.771	ENSGGOG00000017171	PATZ1	100	87.198	Gorilla_gorilla
ENSSPUG00000015298	PATZ1	95	58.240	ENSHCOG00000017644	patz1	99	52.067	Hippocampus_comes
ENSSPUG00000015298	PATZ1	95	56.757	ENSIPUG00000017653	patz1	97	58.182	Ictalurus_punctatus
ENSSPUG00000015298	PATZ1	100	86.060	ENSSTOG00000020707	PATZ1	100	86.913	Ictidomys_tridecemlineatus
ENSSPUG00000015298	PATZ1	100	85.331	ENSJJAG00000015259	Patz1	100	85.795	Jaculus_jaculus
ENSSPUG00000015298	PATZ1	97	56.916	ENSKMAG00000008157	patz1	99	56.590	Kryptolebias_marmoratus
ENSSPUG00000015298	PATZ1	100	86.383	ENSLAFG00000002317	PATZ1	100	86.771	Loxodonta_africana
ENSSPUG00000015298	PATZ1	100	86.771	ENSMFAG00000040968	PATZ1	100	87.055	Macaca_fascicularis
ENSSPUG00000015298	PATZ1	100	86.771	ENSMNEG00000037588	PATZ1	100	87.055	Macaca_nemestrina
ENSSPUG00000015298	PATZ1	100	87.234	ENSMLEG00000030938	PATZ1	100	87.055	Mandrillus_leucophaeus
ENSSPUG00000015298	PATZ1	97	56.593	ENSMAMG00000023652	patz1	99	56.181	Mastacembelus_armatus
ENSSPUG00000015298	PATZ1	83	91.938	ENSMGAG00000008439	PATZ1	100	91.938	Meleagris_gallopavo
ENSSPUG00000015298	PATZ1	100	86.344	ENSMAUG00000004129	Patz1	100	86.629	Mesocricetus_auratus
ENSSPUG00000015298	PATZ1	100	86.913	ENSMICG00000005430	PATZ1	100	87.340	Microcebus_murinus
ENSSPUG00000015298	PATZ1	100	86.486	ENSMOCG00000014488	Patz1	100	86.771	Microtus_ochrogaster
ENSSPUG00000015298	PATZ1	92	52.471	ENSMMOG00000021679	patz1	68	54.595	Mola_mola
ENSSPUG00000015298	PATZ1	97	56.348	ENSMALG00000021172	patz1	99	56.063	Monopterus_albus
ENSSPUG00000015298	PATZ1	100	86.202	MGP_CAROLIEiJ_G0016007	Patz1	100	86.486	Mus_caroli
ENSSPUG00000015298	PATZ1	100	86.344	ENSMUSG00000020453	Patz1	100	86.629	Mus_musculus
ENSSPUG00000015298	PATZ1	100	86.344	MGP_PahariEiJ_G0016884	Patz1	100	86.629	Mus_pahari
ENSSPUG00000015298	PATZ1	100	86.344	MGP_SPRETEiJ_G0016846	Patz1	100	86.629	Mus_spretus
ENSSPUG00000015298	PATZ1	100	86.202	ENSMLUG00000009942	PATZ1	100	86.913	Myotis_lucifugus
ENSSPUG00000015298	PATZ1	100	86.629	ENSNGAG00000010268	Patz1	100	86.913	Nannospalax_galili
ENSSPUG00000015298	PATZ1	97	58.110	ENSNBRG00000016032	patz1	99	58.615	Neolamprologus_brichardi
ENSSPUG00000015298	PATZ1	66	92.903	ENSMEUG00000016293	PATZ1	100	92.903	Notamacropus_eugenii
ENSSPUG00000015298	PATZ1	100	86.913	ENSODEG00000003589	PATZ1	100	86.344	Octodon_degus
ENSSPUG00000015298	PATZ1	97	55.870	ENSONIG00000004248	patz1	99	55.587	Oreochromis_niloticus
ENSSPUG00000015298	PATZ1	100	87.216	ENSOANG00000014654	PATZ1	100	87.500	Ornithorhynchus_anatinus
ENSSPUG00000015298	PATZ1	97	56.490	ENSORLG00020010937	patz1	99	56.047	Oryzias_latipes_hni
ENSSPUG00000015298	PATZ1	97	55.935	ENSORLG00015007396	patz1	99	55.798	Oryzias_latipes_hsok
ENSSPUG00000015298	PATZ1	97	57.885	ENSOMEG00000006636	patz1	99	54.676	Oryzias_melastigma
ENSSPUG00000015298	PATZ1	100	86.629	ENSOGAG00000027905	PATZ1	100	87.055	Otolemur_garnettii
ENSSPUG00000015298	PATZ1	100	86.771	ENSPPAG00000033227	PATZ1	100	87.198	Pan_paniscus
ENSSPUG00000015298	PATZ1	100	86.202	ENSPPRG00000001573	PATZ1	100	87.055	Panthera_pardus
ENSSPUG00000015298	PATZ1	84	90.136	ENSPTIG00000007937	PATZ1	90	90.986	Panthera_tigris_altaica
ENSSPUG00000015298	PATZ1	100	86.771	ENSPTRG00000014268	PATZ1	100	87.198	Pan_troglodytes
ENSSPUG00000015298	PATZ1	100	87.234	ENSPANG00000006821	PATZ1	100	87.055	Papio_anubis
ENSSPUG00000015298	PATZ1	96	62.101	ENSPKIG00000019584	patz1	98	61.484	Paramormyrops_kingsleyae
ENSSPUG00000015298	PATZ1	59	89.294	ENSPSIG00000016553	-	91	88.808	Pelodiscus_sinensis
ENSSPUG00000015298	PATZ1	57	98.232	ENSPSIG00000011562	-	100	98.232	Pelodiscus_sinensis
ENSSPUG00000015298	PATZ1	97	57.204	ENSPMGG00000010196	patz1	99	56.919	Periophthalmus_magnuspinnatus
ENSSPUG00000015298	PATZ1	100	86.486	ENSPEMG00000005321	Patz1	100	86.629	Peromyscus_maniculatus_bairdii
ENSSPUG00000015298	PATZ1	96	55.844	ENSPLAG00000010425	patz1	100	56.486	Poecilia_latipinna
ENSSPUG00000015298	PATZ1	96	56.069	ENSPMEG00000000255	patz1	99	55.079	Poecilia_mexicana
ENSSPUG00000015298	PATZ1	97	56.885	ENSPREG00000002440	patz1	99	56.128	Poecilia_reticulata
ENSSPUG00000015298	PATZ1	100	86.771	ENSPPYG00000011732	PATZ1	100	87.198	Pongo_abelii
ENSSPUG00000015298	PATZ1	100	86.771	ENSPCOG00000019729	PATZ1	100	87.198	Propithecus_coquereli
ENSSPUG00000015298	PATZ1	100	86.060	ENSPVAG00000001749	PATZ1	100	87.055	Pteropus_vampyrus
ENSSPUG00000015298	PATZ1	97	58.766	ENSPNYG00000013542	patz1	99	58.205	Pundamilia_nyererei
ENSSPUG00000015298	PATZ1	82	58.497	ENSPNAG00000017222	patz1	99	58.497	Pygocentrus_nattereri
ENSSPUG00000015298	PATZ1	100	87.234	ENSRBIG00000044231	PATZ1	100	87.055	Rhinopithecus_bieti
ENSSPUG00000015298	PATZ1	100	87.234	ENSRROG00000037155	PATZ1	100	87.055	Rhinopithecus_roxellana
ENSSPUG00000015298	PATZ1	100	86.629	ENSSBOG00000003894	PATZ1	100	87.055	Saimiri_boliviensis_boliviensis
ENSSPUG00000015298	PATZ1	77	78.469	ENSSFOG00015013244	patz1	76	76.667	Scleropages_formosus
ENSSPUG00000015298	PATZ1	83	89.555	ENSSSCG00000010027	PATZ1	100	90.411	Sus_scrofa
ENSSPUG00000015298	PATZ1	97	57.400	ENSTRUG00000015366	patz1	99	56.708	Takifugu_rubripes
ENSSPUG00000015298	PATZ1	100	86.060	ENSTTRG00000010279	PATZ1	100	86.913	Tursiops_truncatus
ENSSPUG00000015298	PATZ1	100	82.526	ENSUAMG00000015014	PATZ1	100	83.407	Ursus_americanus
ENSSPUG00000015298	PATZ1	98	71.366	ENSXETG00000004190	patz1	100	70.270	Xenopus_tropicalis
ENSSPUG00000015298	PATZ1	97	56.391	ENSXMAG00000015531	patz1	99	55.556	Xiphophorus_maculatus