EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000015364 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 127478 bases
Position: chrQEPC01010682.1:671750-799227
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000020017	SpoU_methylase	PF00588.19	3.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000021318	TARBP1-201	4656	-	ENSSPUP00000020017	1551 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000015364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000015364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000015364	TARBP1	100	64.832	ENSG00000059588	TARBP1	99	64.954	Homo_sapiens
ENSSPUG00000015364	TARBP1	99	41.904	ENSAPOG00000016419	si:dkey-85a20.4	86	44.585	Acanthochromis_polyacanthus
ENSSPUG00000015364	TARBP1	85	66.691	ENSAMEG00000003359	TARBP1	99	66.691	Ailuropoda_melanoleuca
ENSSPUG00000015364	TARBP1	97	42.724	ENSATEG00000020266	si:dkey-85a20.4	99	42.156	Anabas_testudineus
ENSSPUG00000015364	TARBP1	84	70.712	ENSAPLG00000007666	TARBP1	99	72.298	Anas_platyrhynchos
ENSSPUG00000015364	TARBP1	99	64.093	ENSACAG00000001142	TARBP1	98	64.218	Anolis_carolinensis
ENSSPUG00000015364	TARBP1	92	65.907	ENSANAG00000022031	TARBP1	99	61.940	Aotus_nancymaae
ENSSPUG00000015364	TARBP1	93	75.787	ENSBTAG00000004517	TARBP1	99	75.787	Bos_taurus
ENSSPUG00000015364	TARBP1	100	64.120	ENSCJAG00000018155	TARBP1	99	64.242	Callithrix_jacchus
ENSSPUG00000015364	TARBP1	89	65.214	ENSCAFG00000011533	TARBP1	99	65.743	Canis_familiaris
ENSSPUG00000015364	TARBP1	88	65.315	ENSCAFG00020027141	TARBP1	99	63.155	Canis_lupus_dingo
ENSSPUG00000015364	TARBP1	99	63.242	ENSCHIG00000011437	TARBP1	99	63.248	Capra_hircus
ENSSPUG00000015364	TARBP1	81	67.352	ENSTSYG00000010382	TARBP1	97	67.656	Carlito_syrichta
ENSSPUG00000015364	TARBP1	79	58.353	ENSCAPG00000010831	TARBP1	99	58.513	Cavia_aperea
ENSSPUG00000015364	TARBP1	99	59.186	ENSCPOG00000013995	TARBP1	99	59.394	Cavia_porcellus
ENSSPUG00000015364	TARBP1	96	76.073	ENSCCAG00000037278	TARBP1	99	76.073	Cebus_capucinus
ENSSPUG00000015364	TARBP1	100	64.713	ENSCATG00000011754	TARBP1	99	64.774	Cercocebus_atys
ENSSPUG00000015364	TARBP1	81	63.914	ENSCLAG00000003655	TARBP1	96	64.067	Chinchilla_lanigera
ENSSPUG00000015364	TARBP1	79	69.057	ENSCSAG00000010100	TARBP1	99	69.057	Chlorocebus_sabaeus
ENSSPUG00000015364	TARBP1	95	72.277	ENSCPBG00000005587	TARBP1	94	78.707	Chrysemys_picta_bellii
ENSSPUG00000015364	TARBP1	84	68.603	ENSCANG00000034343	TARBP1	99	68.603	Colobus_angolensis_palliatus
ENSSPUG00000015364	TARBP1	99	60.372	ENSCGRG00001016690	Tarbp1	99	59.901	Cricetulus_griseus_chok1gshd
ENSSPUG00000015364	TARBP1	91	61.299	ENSCGRG00000016893	Tarbp1	98	61.570	Cricetulus_griseus_crigri
ENSSPUG00000015364	TARBP1	99	38.797	ENSCSEG00000005255	si:dkey-85a20.4	99	38.639	Cynoglossus_semilaevis
ENSSPUG00000015364	TARBP1	99	40.481	ENSDARG00000079055	si:dkey-85a20.4	99	55.517	Danio_rerio
ENSSPUG00000015364	TARBP1	100	63.158	ENSDNOG00000008637	TARBP1	99	64.127	Dasypus_novemcinctus
ENSSPUG00000015364	TARBP1	80	61.799	ENSDORG00000007984	Tarbp1	100	61.799	Dipodomys_ordii
ENSSPUG00000015364	TARBP1	99	65.209	ENSEASG00005000252	TARBP1	99	64.670	Equus_asinus_asinus
ENSSPUG00000015364	TARBP1	99	65.489	ENSECAG00000023673	TARBP1	99	65.678	Equus_caballus
ENSSPUG00000015364	TARBP1	85	45.385	ENSELUG00000012193	si:dkey-85a20.4	87	42.757	Esox_lucius
ENSSPUG00000015364	TARBP1	99	61.506	ENSFCAG00000014183	TARBP1	99	61.651	Felis_catus
ENSSPUG00000015364	TARBP1	80	70.584	ENSFALG00000013565	TARBP1	99	70.588	Ficedula_albicollis
ENSSPUG00000015364	TARBP1	79	62.137	ENSFDAG00000001308	TARBP1	99	60.136	Fukomys_damarensis
ENSSPUG00000015364	TARBP1	93	53.846	ENSFHEG00000007565	si:dkey-85a20.4	98	53.846	Fundulus_heteroclitus
ENSSPUG00000015364	TARBP1	86	42.221	ENSGMOG00000004549	si:dkey-85a20.4	99	42.221	Gadus_morhua
ENSSPUG00000015364	TARBP1	100	65.689	ENSGALG00000011000	TARBP1	100	66.242	Gallus_gallus
ENSSPUG00000015364	TARBP1	99	41.344	ENSGAFG00000007387	si:dkey-85a20.4	86	44.147	Gambusia_affinis
ENSSPUG00000015364	TARBP1	86	44.097	ENSGACG00000005865	si:dkey-85a20.4	99	44.097	Gasterosteus_aculeatus
ENSSPUG00000015364	TARBP1	99	81.031	ENSGAGG00000012102	TARBP1	100	72.862	Gopherus_agassizii
ENSSPUG00000015364	TARBP1	85	66.231	ENSGGOG00000022879	TARBP1	99	66.231	Gorilla_gorilla
ENSSPUG00000015364	TARBP1	97	42.706	ENSHBUG00000008877	si:dkey-85a20.4	86	45.525	Haplochromis_burtoni
ENSSPUG00000015364	TARBP1	99	59.901	ENSHGLG00000011592	TARBP1	99	60.853	Heterocephalus_glaber_female
ENSSPUG00000015364	TARBP1	94	61.704	ENSHGLG00100015169	TARBP1	99	61.704	Heterocephalus_glaber_male
ENSSPUG00000015364	TARBP1	96	43.574	ENSIPUG00000005249	si:dkey-85a20.4	83	42.867	Ictalurus_punctatus
ENSSPUG00000015364	TARBP1	83	62.407	ENSSTOG00000032291	TARBP1	96	62.333	Ictidomys_tridecemlineatus
ENSSPUG00000015364	TARBP1	91	59.782	ENSJJAG00000017840	Tarbp1	99	59.638	Jaculus_jaculus
ENSSPUG00000015364	TARBP1	84	48.413	ENSKMAG00000017546	si:dkey-85a20.4	87	48.677	Kryptolebias_marmoratus
ENSSPUG00000015364	TARBP1	72	49.844	ENSLBEG00000012132	si:dkey-85a20.4	79	49.844	Labrus_bergylta
ENSSPUG00000015364	TARBP1	99	51.852	ENSLACG00000004337	TARBP1	99	51.519	Latimeria_chalumnae
ENSSPUG00000015364	TARBP1	98	52.744	ENSLOCG00000016214	si:dkey-85a20.4	96	52.744	Lepisosteus_oculatus
ENSSPUG00000015364	TARBP1	96	63.826	ENSLAFG00000011394	TARBP1	99	64.353	Loxodonta_africana
ENSSPUG00000015364	TARBP1	100	63.485	ENSMFAG00000041068	TARBP1	99	63.362	Macaca_fascicularis
ENSSPUG00000015364	TARBP1	100	63.010	ENSMMUG00000021703	TARBP1	99	63.071	Macaca_mulatta
ENSSPUG00000015364	TARBP1	100	64.713	ENSMNEG00000045002	TARBP1	99	64.774	Macaca_nemestrina
ENSSPUG00000015364	TARBP1	84	68.557	ENSMLEG00000044182	TARBP1	99	68.557	Mandrillus_leucophaeus
ENSSPUG00000015364	TARBP1	98	42.609	ENSMAMG00000021760	si:dkey-85a20.4	87	44.986	Mastacembelus_armatus
ENSSPUG00000015364	TARBP1	97	42.706	ENSMZEG00005005751	si:dkey-85a20.4	86	45.455	Maylandia_zebra
ENSSPUG00000015364	TARBP1	99	59.615	ENSMAUG00000020968	Tarbp1	99	59.291	Mesocricetus_auratus
ENSSPUG00000015364	TARBP1	99	58.900	ENSMICG00000015280	TARBP1	99	58.987	Microcebus_murinus
ENSSPUG00000015364	TARBP1	99	59.567	ENSMOCG00000004128	Tarbp1	99	59.615	Microtus_ochrogaster
ENSSPUG00000015364	TARBP1	97	45.976	ENSMMOG00000007795	si:dkey-85a20.4	99	40.646	Mola_mola
ENSSPUG00000015364	TARBP1	100	63.964	ENSMODG00000008504	TARBP1	100	64.101	Monodelphis_domestica
ENSSPUG00000015364	TARBP1	99	41.739	ENSMALG00000002916	si:dkey-85a20.4	99	41.846	Monopterus_albus
ENSSPUG00000015364	TARBP1	99	59.441	MGP_CAROLIEiJ_G0031729	Tarbp1	99	59.080	Mus_caroli
ENSSPUG00000015364	TARBP1	99	59.402	ENSMUSG00000090290	Tarbp1	99	59.077	Mus_musculus
ENSSPUG00000015364	TARBP1	99	59.814	MGP_PahariEiJ_G0023326	Tarbp1	99	59.490	Mus_pahari
ENSSPUG00000015364	TARBP1	99	59.340	MGP_SPRETEiJ_G0032846	Tarbp1	99	59.264	Mus_spretus
ENSSPUG00000015364	TARBP1	77	66.212	ENSMPUG00000002802	TARBP1	99	66.292	Mustela_putorius_furo
ENSSPUG00000015364	TARBP1	84	62.336	ENSMLUG00000002414	TARBP1	99	62.336	Myotis_lucifugus
ENSSPUG00000015364	TARBP1	100	64.936	ENSNLEG00000002518	TARBP1	99	64.997	Nomascus_leucogenys
ENSSPUG00000015364	TARBP1	66	77.331	ENSMEUG00000011370	-	67	77.331	Notamacropus_eugenii
ENSSPUG00000015364	TARBP1	70	73.632	ENSOPRG00000013822	TARBP1	68	73.632	Ochotona_princeps
ENSSPUG00000015364	TARBP1	99	59.051	ENSODEG00000005238	TARBP1	99	58.728	Octodon_degus
ENSSPUG00000015364	TARBP1	86	45.487	ENSONIG00000009789	si:dkey-85a20.4	99	45.487	Oreochromis_niloticus
ENSSPUG00000015364	TARBP1	99	63.364	ENSOCUG00000017418	TARBP1	99	63.731	Oryctolagus_cuniculus
ENSSPUG00000015364	TARBP1	97	40.943	ENSORLG00000010529	si:dkey-85a20.4	85	43.577	Oryzias_latipes
ENSSPUG00000015364	TARBP1	97	40.794	ENSORLG00020019264	si:dkey-85a20.4	85	43.506	Oryzias_latipes_hni
ENSSPUG00000015364	TARBP1	97	40.658	ENSORLG00015003276	si:dkey-85a20.4	85	43.497	Oryzias_latipes_hsok
ENSSPUG00000015364	TARBP1	99	62.707	ENSOGAG00000002379	TARBP1	99	62.668	Otolemur_garnettii
ENSSPUG00000015364	TARBP1	92	65.625	ENSOARG00000003434	TARBP1	99	65.099	Ovis_aries
ENSSPUG00000015364	TARBP1	84	68.594	ENSPPAG00000028097	TARBP1	99	68.594	Pan_paniscus
ENSSPUG00000015364	TARBP1	99	63.178	ENSPPRG00000013561	TARBP1	99	63.198	Panthera_pardus
ENSSPUG00000015364	TARBP1	83	67.238	ENSPTIG00000009281	TARBP1	99	67.238	Panthera_tigris_altaica
ENSSPUG00000015364	TARBP1	100	64.857	ENSPTRG00000002124	TARBP1	99	64.875	Pan_troglodytes
ENSSPUG00000015364	TARBP1	100	64.530	ENSPANG00000021933	TARBP1	99	64.591	Papio_anubis
ENSSPUG00000015364	TARBP1	85	47.588	ENSPKIG00000016716	si:dkey-85a20.4	85	45.173	Paramormyrops_kingsleyae
ENSSPUG00000015364	TARBP1	79	75.814	ENSPSIG00000010699	TARBP1	100	76.279	Pelodiscus_sinensis
ENSSPUG00000015364	TARBP1	95	61.775	ENSPEMG00000006888	Tarbp1	99	61.775	Peromyscus_maniculatus_bairdii
ENSSPUG00000015364	TARBP1	91	84.466	ENSPCIG00000029710	TARBP1	99	84.466	Phascolarctos_cinereus
ENSSPUG00000015364	TARBP1	86	43.777	ENSPFOG00000013020	si:dkey-85a20.4	99	43.847	Poecilia_formosa
ENSSPUG00000015364	TARBP1	99	41.169	ENSPLAG00000006044	si:dkey-85a20.4	85	44.145	Poecilia_latipinna
ENSSPUG00000015364	TARBP1	99	40.970	ENSPMEG00000017857	si:dkey-85a20.4	85	43.834	Poecilia_mexicana
ENSSPUG00000015364	TARBP1	99	41.400	ENSPREG00000022753	si:dkey-85a20.4	86	44.366	Poecilia_reticulata
ENSSPUG00000015364	TARBP1	90	67.873	ENSPPYG00000000102	TARBP1	99	67.873	Pongo_abelii
ENSSPUG00000015364	TARBP1	85	86.577	ENSPCAG00000004808	TARBP1	85	86.577	Procavia_capensis
ENSSPUG00000015364	TARBP1	99	62.416	ENSPCOG00000005666	TARBP1	99	62.354	Propithecus_coquereli
ENSSPUG00000015364	TARBP1	97	59.567	ENSPVAG00000014798	TARBP1	97	59.567	Pteropus_vampyrus
ENSSPUG00000015364	TARBP1	99	42.017	ENSPNYG00000019135	si:dkey-85a20.4	86	45.180	Pundamilia_nyererei
ENSSPUG00000015364	TARBP1	99	56.417	ENSRNOG00000053574	Tarbp1	99	56.079	Rattus_norvegicus
ENSSPUG00000015364	TARBP1	91	63.064	ENSRBIG00000043362	TARBP1	99	63.201	Rhinopithecus_bieti
ENSSPUG00000015364	TARBP1	100	63.851	ENSRROG00000029527	TARBP1	99	63.951	Rhinopithecus_roxellana
ENSSPUG00000015364	TARBP1	91	67.120	ENSSBOG00000034503	TARBP1	99	67.312	Saimiri_boliviensis_boliviensis
ENSSPUG00000015364	TARBP1	84	69.027	ENSSHAG00000000013	TARBP1	99	69.027	Sarcophilus_harrisii
ENSSPUG00000015364	TARBP1	84	45.374	ENSSFOG00015002660	si:dkey-85a20.4	97	45.251	Scleropages_formosus
ENSSPUG00000015364	TARBP1	99	42.282	ENSSMAG00000007081	si:dkey-85a20.4	99	42.042	Scophthalmus_maximus
ENSSPUG00000015364	TARBP1	99	41.430	ENSSDUG00000023566	si:dkey-85a20.4	97	41.202	Seriola_dumerili
ENSSPUG00000015364	TARBP1	99	42.054	ENSSLDG00000020200	si:dkey-85a20.4	86	44.835	Seriola_lalandi_dorsalis
ENSSPUG00000015364	TARBP1	88	79.254	ENSSARG00000012207	TARBP1	89	79.254	Sorex_araneus
ENSSPUG00000015364	TARBP1	97	41.816	ENSSPAG00000007213	si:dkey-85a20.4	86	44.390	Stegastes_partitus
ENSSPUG00000015364	TARBP1	99	64.176	ENSSSCG00000010160	TARBP1	99	65.836	Sus_scrofa
ENSSPUG00000015364	TARBP1	81	70.368	ENSTGUG00000010214	TARBP1	100	70.444	Taeniopygia_guttata
ENSSPUG00000015364	TARBP1	94	40.172	ENSTNIG00000016586	si:dkey-85a20.4	99	44.428	Tetraodon_nigroviridis
ENSSPUG00000015364	TARBP1	91	62.718	ENSTTRG00000008707	TARBP1	96	62.718	Tursiops_truncatus
ENSSPUG00000015364	TARBP1	82	66.792	ENSUMAG00000006730	TARBP1	99	66.792	Ursus_maritimus
ENSSPUG00000015364	TARBP1	79	85.417	ENSVPAG00000007665	TARBP1	86	85.417	Vicugna_pacos
ENSSPUG00000015364	TARBP1	85	66.399	ENSVVUG00000007460	TARBP1	99	64.669	Vulpes_vulpes
ENSSPUG00000015364	TARBP1	84	56.149	ENSXETG00000016224	tarbp1	99	55.678	Xenopus_tropicalis
ENSSPUG00000015364	TARBP1	79	50.409	ENSXCOG00000011779	si:dkey-85a20.4	94	50.409	Xiphophorus_couchianus
ENSSPUG00000015364	TARBP1	64	42.017	ENSXMAG00000009600	si:dkey-85a20.4	100	42.017	Xiphophorus_maculatus