EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPUG00000015525 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Sphenodon_punctatus
Status
putative
Strand
Plus strand
Length
58925 bases
Position
chrQEPC01008233.1:3951352-4010276
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPUP00000020283CPSF73-100_CPF11718.89.9e-5311
ENSSPUP00000020283Beta-CaspPF10996.87.7e-2911
ENSSPUP00000020283Lactamase_BPF00753.279.9e-1911
ENSSPUP00000020283RMMBLPF07521.121.2e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPUT00000021599CPSF3-2012070-ENSSPUP00000020283689 (aa)--
Gene Model
Click here to download ENSSPUG00000015525's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000015525's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPUG00000015525CPSF37038.690ENSSPUG00000016767INTS118138.690
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPUG00000015525CPSF39792.399ENSG00000119203CPSF310099.265Homo_sapiens
ENSSPUG00000015525CPSF37194.683ENSAPOG00000012241CPSF38794.683Acanthochromis_polyacanthus
ENSSPUG00000015525CPSF39784.155ENSAPOG00000022087cpsf39684.155Acanthochromis_polyacanthus
ENSSPUG00000015525CPSF39792.846ENSAMEG00000008493CPSF39892.846Ailuropoda_melanoleuca
ENSSPUG00000015525CPSF39284.543ENSACIG00000023663CPSF39984.543Amphilophus_citrinellus
ENSSPUG00000015525CPSF39181.329ENSACIG00000009846cpsf39981.329Amphilophus_citrinellus
ENSSPUG00000015525CPSF39785.821ENSAOCG00000010077CPSF39685.821Amphiprion_ocellaris
ENSSPUG00000015525CPSF39784.305ENSAOCG00000022056cpsf39189.792Amphiprion_ocellaris
ENSSPUG00000015525CPSF39784.454ENSAPEG00000019526cpsf39981.487Amphiprion_percula
ENSSPUG00000015525CPSF39785.821ENSAPEG00000021167CPSF39685.821Amphiprion_percula
ENSSPUG00000015525CPSF39781.045ENSATEG00000014525CPSF39681.045Anabas_testudineus
ENSSPUG00000015525CPSF39784.179ENSATEG00000003959cpsf39981.833Anabas_testudineus
ENSSPUG00000015525CPSF39793.890ENSAPLG00000006941CPSF39893.890Anas_platyrhynchos
ENSSPUG00000015525CPSF39390.454ENSACAG00000001759CPSF39990.454Anolis_carolinensis
ENSSPUG00000015525CPSF39786.438ENSANAG00000031254CPSF39986.438Aotus_nancymaae
ENSSPUG00000015525CPSF39784.753ENSACLG00000014484cpsf39984.753Astatotilapia_calliptera
ENSSPUG00000015525CPSF39284.385ENSACLG00000018846CPSF39984.385Astatotilapia_calliptera
ENSSPUG00000015525CPSF39785.373ENSAMXG00000004786cpsf39685.373Astyanax_mexicanus
ENSSPUG00000015525CPSF39792.697ENSBTAG00000019735CPSF39892.697Bos_taurus
ENSSPUG00000015525CPSF39157.276WBGene00013460cpsf-39057.276Caenorhabditis_elegans
ENSSPUG00000015525CPSF39792.399ENSCJAG00000006276CPSF39892.399Callithrix_jacchus
ENSSPUG00000015525CPSF39792.846ENSCAFG00000003375CPSF39392.846Canis_familiaris
ENSSPUG00000015525CPSF38894.719ENSCAFG00020026799CPSF39794.719Canis_lupus_dingo
ENSSPUG00000015525CPSF39792.697ENSCHIG00000013973CPSF39892.697Capra_hircus
ENSSPUG00000015525CPSF39792.250ENSTSYG00000002967CPSF39892.250Carlito_syrichta
ENSSPUG00000015525CPSF39791.207ENSCAPG00000013851CPSF310091.207Cavia_aperea
ENSSPUG00000015525CPSF39791.207ENSCPOG00000011299CPSF39891.207Cavia_porcellus
ENSSPUG00000015525CPSF39792.250ENSCCAG00000036730CPSF39992.250Cebus_capucinus
ENSSPUG00000015525CPSF39789.881ENSCATG00000014770CPSF39796.127Cercocebus_atys
ENSSPUG00000015525CPSF39791.505ENSCLAG00000002727CPSF39891.505Chinchilla_lanigera
ENSSPUG00000015525CPSF39784.352ENSCSAG00000007125CPSF39784.352Chlorocebus_sabaeus
ENSSPUG00000015525CPSF386100.000ENSCHOG00000000180CPSF38567.073Choloepus_hoffmanni
ENSSPUG00000015525CPSF39794.179ENSCPBG00000014074CPSF39694.179Chrysemys_picta_bellii
ENSSPUG00000015525CPSF39766.914ENSCING00000007214-9666.914Ciona_intestinalis
ENSSPUG00000015525CPSF39780.626ENSCANG00000034435CPSF39780.626Colobus_angolensis_palliatus
ENSSPUG00000015525CPSF39792.101ENSCGRG00001013134Cpsf39892.101Cricetulus_griseus_chok1gshd
ENSSPUG00000015525CPSF39792.101ENSCGRG00000018319Cpsf39892.101Cricetulus_griseus_crigri
ENSSPUG00000015525CPSF39784.650ENSCSEG00000002021CPSF39984.178Cynoglossus_semilaevis
ENSSPUG00000015525CPSF39785.821ENSCVAG00000015067CPSF39685.821Cyprinodon_variegatus
ENSSPUG00000015525CPSF39786.119ENSDARG00000027649cpsf39686.119Danio_rerio
ENSSPUG00000015525CPSF39791.369ENSDNOG00000008940CPSF39391.369Dasypus_novemcinctus
ENSSPUG00000015525CPSF39393.103ENSDORG00000014263Cpsf39793.103Dipodomys_ordii
ENSSPUG00000015525CPSF39766.069FBgn0261065Cpsf739666.069Drosophila_melanogaster
ENSSPUG00000015525CPSF39082.982ENSETEG00000003893CPSF39482.982Echinops_telfairi
ENSSPUG00000015525CPSF39776.923ENSEBUG00000009018cpsf39676.923Eptatretus_burgeri
ENSSPUG00000015525CPSF39792.846ENSEASG00005003970CPSF39892.846Equus_asinus_asinus
ENSSPUG00000015525CPSF39792.846ENSECAG00000019911CPSF39892.846Equus_caballus
ENSSPUG00000015525CPSF39777.049ENSEEUG00000015422CPSF39877.049Erinaceus_europaeus
ENSSPUG00000015525CPSF39785.949ENSELUG00000013775cpsf39983.861Esox_lucius
ENSSPUG00000015525CPSF39792.697ENSFCAG00000007852CPSF310092.473Felis_catus
ENSSPUG00000015525CPSF39494.009ENSFALG00000006572CPSF310094.009Ficedula_albicollis
ENSSPUG00000015525CPSF39791.031ENSFDAG00000006317CPSF39791.031Fukomys_damarensis
ENSSPUG00000015525CPSF39782.960ENSFHEG00000014774cpsf39682.960Fundulus_heteroclitus
ENSSPUG00000015525CPSF35966.748ENSFHEG00000012186CPSF39966.748Fundulus_heteroclitus
ENSSPUG00000015525CPSF39784.030ENSGMOG00000003157cpsf39684.030Gadus_morhua
ENSSPUG00000015525CPSF39792.399ENSGALG00000016424CPSF39992.019Gallus_gallus
ENSSPUG00000015525CPSF39786.099ENSGAFG00000008016CPSF39686.099Gambusia_affinis
ENSSPUG00000015525CPSF39280.569ENSGAFG00000019449cpsf39980.569Gambusia_affinis
ENSSPUG00000015525CPSF36891.932ENSGAGG00000025583CPSF39391.932Gopherus_agassizii
ENSSPUG00000015525CPSF39790.087ENSGGOG00000001757CPSF310092.019Gorilla_gorilla
ENSSPUG00000015525CPSF35978.765ENSHBUG00000014332CPSF39978.765Haplochromis_burtoni
ENSSPUG00000015525CPSF39784.753ENSHBUG00000001188cpsf39982.437Haplochromis_burtoni
ENSSPUG00000015525CPSF39790.760ENSHGLG00000000666CPSF39790.760Heterocephalus_glaber_female
ENSSPUG00000015525CPSF39790.760ENSHGLG00100007765CPSF39790.760Heterocephalus_glaber_male
ENSSPUG00000015525CPSF39783.731ENSHCOG00000007251cpsf39683.731Hippocampus_comes
ENSSPUG00000015525CPSF39783.731ENSHCOG00000015957CPSF39583.731Hippocampus_comes
ENSSPUG00000015525CPSF39783.881ENSIPUG00000023488cpsf39683.881Ictalurus_punctatus
ENSSPUG00000015525CPSF39792.697ENSSTOG00000004476CPSF39892.697Ictidomys_tridecemlineatus
ENSSPUG00000015525CPSF39791.654ENSJJAG00000023415Cpsf39891.654Jaculus_jaculus
ENSSPUG00000015525CPSF39782.960ENSKMAG00000002806cpsf39682.960Kryptolebias_marmoratus
ENSSPUG00000015525CPSF39785.373ENSKMAG00000007317CPSF39685.373Kryptolebias_marmoratus
ENSSPUG00000015525CPSF39386.520ENSLBEG00000013492CPSF39686.520Labrus_bergylta
ENSSPUG00000015525CPSF39778.358ENSLBEG00000020569cpsf39278.358Labrus_bergylta
ENSSPUG00000015525CPSF35479.088ENSLBEG00000015018-9979.088Labrus_bergylta
ENSSPUG00000015525CPSF39781.016ENSLACG00000008308CPSF39681.016Latimeria_chalumnae
ENSSPUG00000015525CPSF39786.140ENSLOCG00000016823cpsf39686.140Lepisosteus_oculatus
ENSSPUG00000015525CPSF39892.160ENSLAFG00000009467CPSF39992.160Loxodonta_africana
ENSSPUG00000015525CPSF39792.250ENSMFAG00000001339CPSF39992.000Macaca_fascicularis
ENSSPUG00000015525CPSF39492.012ENSMMUG00000018038CPSF310092.012Macaca_mulatta
ENSSPUG00000015525CPSF38997.925ENSMNEG00000039447CPSF39797.925Macaca_nemestrina
ENSSPUG00000015525CPSF39792.399ENSMLEG00000026825CPSF39892.399Mandrillus_leucophaeus
ENSSPUG00000015525CPSF39784.006ENSMAMG00000003076cpsf39684.006Mastacembelus_armatus
ENSSPUG00000015525CPSF39283.019ENSMAMG00000008835CPSF39983.019Mastacembelus_armatus
ENSSPUG00000015525CPSF39786.269ENSMZEG00005006258CPSF39984.385Maylandia_zebra
ENSSPUG00000015525CPSF39784.753ENSMZEG00005014358cpsf39982.437Maylandia_zebra
ENSSPUG00000015525CPSF39792.399ENSMGAG00000013995CPSF310092.399Meleagris_gallopavo
ENSSPUG00000015525CPSF35588.032ENSMAUG00000000166Cpsf310088.032Mesocricetus_auratus
ENSSPUG00000015525CPSF39787.481ENSMICG00000002363CPSF310086.801Microcebus_murinus
ENSSPUG00000015525CPSF39788.525ENSMOCG00000020067Cpsf39788.525Microtus_ochrogaster
ENSSPUG00000015525CPSF39480.123ENSMMOG00000018212CPSF39880.123Mola_mola
ENSSPUG00000015525CPSF37374.296ENSMMOG00000011923CPSF38474.296Mola_mola
ENSSPUG00000015525CPSF39791.298ENSMODG00000014703CPSF39891.298Monodelphis_domestica
ENSSPUG00000015525CPSF39784.328ENSMALG00000016416cpsf39684.328Monopterus_albus
ENSSPUG00000015525CPSF39381.522ENSMALG00000011474CPSF39981.522Monopterus_albus
ENSSPUG00000015525CPSF39791.803MGP_CAROLIEiJ_G0017640Cpsf39891.803Mus_caroli
ENSSPUG00000015525CPSF39791.803ENSMUSG00000054309Cpsf39699.578Mus_musculus
ENSSPUG00000015525CPSF39791.654MGP_PahariEiJ_G0029397Cpsf39891.654Mus_pahari
ENSSPUG00000015525CPSF39791.803MGP_SPRETEiJ_G0018481Cpsf39891.803Mus_spretus
ENSSPUG00000015525CPSF39792.250ENSMPUG00000013213CPSF39892.250Mustela_putorius_furo
ENSSPUG00000015525CPSF39791.964ENSMLUG00000010636CPSF39891.964Myotis_lucifugus
ENSSPUG00000015525CPSF39792.101ENSNGAG00000019836Cpsf39892.101Nannospalax_galili
ENSSPUG00000015525CPSF39284.385ENSNBRG00000010525CPSF39984.385Neolamprologus_brichardi
ENSSPUG00000015525CPSF39784.604ENSNBRG00000004770cpsf39982.278Neolamprologus_brichardi
ENSSPUG00000015525CPSF39792.250ENSNLEG00000013359CPSF310092.012Nomascus_leucogenys
ENSSPUG00000015525CPSF38571.628ENSMEUG00000013117-8671.628Notamacropus_eugenii
ENSSPUG00000015525CPSF38899.153ENSOPRG00000008902CPSF38999.153Ochotona_princeps
ENSSPUG00000015525CPSF39791.356ENSODEG00000003129CPSF39891.356Octodon_degus
ENSSPUG00000015525CPSF39785.052ENSONIG00000018812cpsf39685.052Oreochromis_niloticus
ENSSPUG00000015525CPSF38291.549ENSOANG00000008577CPSF310091.549Ornithorhynchus_anatinus
ENSSPUG00000015525CPSF39792.399ENSOCUG00000003728CPSF39892.399Oryctolagus_cuniculus
ENSSPUG00000015525CPSF39782.511ENSORLG00000018854cpsf39682.511Oryzias_latipes
ENSSPUG00000015525CPSF39782.362ENSORLG00020013331cpsf39682.362Oryzias_latipes_hni
ENSSPUG00000015525CPSF39782.511ENSORLG00015011017cpsf39682.511Oryzias_latipes_hsok
ENSSPUG00000015525CPSF39782.661ENSOMEG00000010647cpsf39282.661Oryzias_melastigma
ENSSPUG00000015525CPSF39782.563ENSOGAG00000001680CPSF39882.563Otolemur_garnettii
ENSSPUG00000015525CPSF39792.697ENSOARG00000015073CPSF39892.697Ovis_aries
ENSSPUG00000015525CPSF39792.399ENSPPAG00000042457CPSF39892.399Pan_paniscus
ENSSPUG00000015525CPSF39792.697ENSPPRG00000016790CPSF310092.473Panthera_pardus
ENSSPUG00000015525CPSF39792.697ENSPTIG00000003920CPSF310092.332Panthera_tigris_altaica
ENSSPUG00000015525CPSF39792.399ENSPTRG00000011638CPSF39892.399Pan_troglodytes
ENSSPUG00000015525CPSF39792.250ENSPANG00000016798CPSF39892.250Papio_anubis
ENSSPUG00000015525CPSF39786.697ENSPKIG00000023646cpsf39986.287Paramormyrops_kingsleyae
ENSSPUG00000015525CPSF39893.611ENSPSIG00000016144CPSF39893.611Pelodiscus_sinensis
ENSSPUG00000015525CPSF35977.531ENSPMGG00000015311CPSF39977.531Periophthalmus_magnuspinnatus
ENSSPUG00000015525CPSF37987.339ENSPMGG00000006141-9387.339Periophthalmus_magnuspinnatus
ENSSPUG00000015525CPSF39792.399ENSPEMG00000017668Cpsf39892.399Peromyscus_maniculatus_bairdii
ENSSPUG00000015525CPSF37689.272ENSPMAG00000004841cpsf39689.272Petromyzon_marinus
ENSSPUG00000015525CPSF39892.433ENSPCIG00000009823CPSF39992.433Phascolarctos_cinereus
ENSSPUG00000015525CPSF39783.284ENSPFOG00000015922cpsf39683.284Poecilia_formosa
ENSSPUG00000015525CPSF39785.800ENSPFOG00000010418-9685.800Poecilia_formosa
ENSSPUG00000015525CPSF35980.198ENSPLAG00000021300-9980.198Poecilia_latipinna
ENSSPUG00000015525CPSF39783.284ENSPLAG00000000882cpsf39683.284Poecilia_latipinna
ENSSPUG00000015525CPSF39783.433ENSPMEG00000018309cpsf39683.433Poecilia_mexicana
ENSSPUG00000015525CPSF39780.746ENSPREG00000004482CPSF39680.746Poecilia_reticulata
ENSSPUG00000015525CPSF39281.201ENSPREG00000014875cpsf39981.201Poecilia_reticulata
ENSSPUG00000015525CPSF39787.779ENSPPYG00000012666CPSF39787.779Pongo_abelii
ENSSPUG00000015525CPSF39061.102ENSPCAG00000015042CPSF39461.102Procavia_capensis
ENSSPUG00000015525CPSF38886.620ENSPCOG00000023016CPSF39786.620Propithecus_coquereli
ENSSPUG00000015525CPSF39792.526ENSPVAG00000005324CPSF39792.526Pteropus_vampyrus
ENSSPUG00000015525CPSF38088.406ENSPNYG00000021047CPSF39188.406Pundamilia_nyererei
ENSSPUG00000015525CPSF39784.753ENSPNYG00000004405cpsf39982.437Pundamilia_nyererei
ENSSPUG00000015525CPSF39785.224ENSPNAG00000023060cpsf39983.096Pygocentrus_nattereri
ENSSPUG00000015525CPSF39791.779ENSRNOG00000052418Cpsf39791.779Rattus_norvegicus
ENSSPUG00000015525CPSF39885.947ENSRBIG00000041615CPSF39987.711Rhinopithecus_bieti
ENSSPUG00000015525CPSF39891.864ENSRROG00000033792CPSF39991.864Rhinopithecus_roxellana
ENSSPUG00000015525CPSF38442.727YLR277CYSH18442.727Saccharomyces_cerevisiae
ENSSPUG00000015525CPSF39788.000ENSSBOG00000027263CPSF39788.000Saimiri_boliviensis_boliviensis
ENSSPUG00000015525CPSF39792.399ENSSHAG00000007024CPSF39892.399Sarcophilus_harrisii
ENSSPUG00000015525CPSF39786.248ENSSFOG00015002108cpsf39985.557Scleropages_formosus
ENSSPUG00000015525CPSF39384.639ENSSMAG00000020534CPSF39384.639Scophthalmus_maximus
ENSSPUG00000015525CPSF39784.305ENSSDUG00000002828cpsf39484.305Seriola_dumerili
ENSSPUG00000015525CPSF39785.672ENSSDUG00000018498CPSF39983.438Seriola_dumerili
ENSSPUG00000015525CPSF39785.672ENSSLDG00000005234CPSF39983.281Seriola_lalandi_dorsalis
ENSSPUG00000015525CPSF39784.305ENSSLDG00000008469cpsf38989.619Seriola_lalandi_dorsalis
ENSSPUG00000015525CPSF39775.559ENSSARG00000005186CPSF39875.559Sorex_araneus
ENSSPUG00000015525CPSF39785.522ENSSPAG00000002906CPSF39983.123Stegastes_partitus
ENSSPUG00000015525CPSF39784.454ENSSPAG00000018579cpsf39684.454Stegastes_partitus
ENSSPUG00000015525CPSF39792.836ENSSSCG00000020799CPSF39991.270Sus_scrofa
ENSSPUG00000015525CPSF39794.188ENSTGUG00000013016CPSF39894.188Taeniopygia_guttata
ENSSPUG00000015525CPSF35971.182ENSTRUG00000013905CPSF39971.182Takifugu_rubripes
ENSSPUG00000015525CPSF39784.155ENSTRUG00000007030cpsf39584.155Takifugu_rubripes
ENSSPUG00000015525CPSF38390.341ENSTBEG00000002707CPSF38290.341Tupaia_belangeri
ENSSPUG00000015525CPSF38581.183ENSTTRG00000000861CPSF38581.183Tursiops_truncatus
ENSSPUG00000015525CPSF39393.468ENSUAMG00000007535CPSF39293.468Ursus_americanus
ENSSPUG00000015525CPSF39492.627ENSUMAG00000003676CPSF310092.627Ursus_maritimus
ENSSPUG00000015525CPSF39391.066ENSVPAG00000008041CPSF310091.066Vicugna_pacos
ENSSPUG00000015525CPSF39792.846ENSVVUG00000002194CPSF39892.846Vulpes_vulpes
ENSSPUG00000015525CPSF39787.593ENSXETG00000008263cpsf39687.593Xenopus_tropicalis
ENSSPUG00000015525CPSF35478.976ENSXCOG00000000957-8778.976Xiphophorus_couchianus
ENSSPUG00000015525CPSF39783.284ENSXCOG00000019695cpsf39683.284Xiphophorus_couchianus
ENSSPUG00000015525CPSF39783.284ENSXMAG00000009784cpsf39982.769Xiphophorus_maculatus
ENSSPUG00000015525CPSF39786.099ENSXMAG00000027291CPSF39686.099Xiphophorus_maculatus

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