EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000015575 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 5358 bases
Position: chrQEPC01001037.1:23054-28411
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000020291	RNase_T	PF00929.24	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000021608	-	708	-	ENSSPUP00000020291	235 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000015575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000015575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000015575	-	92	65.741	ENSSPUG00000012496	-	87	65.741
ENSSPUG00000015575	-	92	65.741	ENSSPUG00000012477	-	88	65.741
ENSSPUG00000015575	-	92	65.741	ENSSPUG00000012485	-	88	65.741
ENSSPUG00000015575	-	92	65.741	ENSSPUG00000012467	-	88	65.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000015575	-	92	52.889	ENSAMEG00000008933	TREX2	78	52.889	Ailuropoda_melanoleuca
ENSSPUG00000015575	-	95	39.574	ENSACAG00000008936	TREX1	95	39.574	Anolis_carolinensis
ENSSPUG00000015575	-	97	56.388	ENSACAG00000012912	TREX2	95	56.388	Anolis_carolinensis
ENSSPUG00000015575	-	92	53.778	ENSCAFG00000019185	TREX2	78	53.778	Canis_familiaris
ENSSPUG00000015575	-	92	53.778	ENSCAFG00020023190	TREX2	70	53.778	Canis_lupus_dingo
ENSSPUG00000015575	-	92	52.889	ENSCAPG00000004768	TREX2	82	52.889	Cavia_aperea
ENSSPUG00000015575	-	92	52.444	ENSCPOG00000025702	TREX2	92	52.444	Cavia_porcellus
ENSSPUG00000015575	-	92	53.571	ENSCLAG00000002698	TREX2	92	53.571	Chinchilla_lanigera
ENSSPUG00000015575	-	93	51.364	ENSCPBG00000008273	TREX2	79	51.364	Chrysemys_picta_bellii
ENSSPUG00000015575	-	92	52.889	ENSCGRG00001012110	Trex2	92	52.889	Cricetulus_griseus_chok1gshd
ENSSPUG00000015575	-	93	39.648	ENSDORG00000016464	Trex1	72	39.648	Dipodomys_ordii
ENSSPUG00000015575	-	92	41.441	ENSEBUG00000006412	TREX1	86	41.441	Eptatretus_burgeri
ENSSPUG00000015575	-	92	52.889	ENSEASG00005019558	TREX2	80	52.889	Equus_asinus_asinus
ENSSPUG00000015575	-	92	52.889	ENSECAG00000016012	TREX2	80	52.889	Equus_caballus
ENSSPUG00000015575	-	92	53.778	ENSFCAG00000018938	TREX2	92	53.778	Felis_catus
ENSSPUG00000015575	-	92	52.000	ENSFDAG00000014463	TREX2	92	52.000	Fukomys_damarensis
ENSSPUG00000015575	-	92	52.444	ENSHGLG00000008010	TREX2	92	52.444	Heterocephalus_glaber_female
ENSSPUG00000015575	-	92	52.444	ENSHGLG00100011918	TREX2	92	52.444	Heterocephalus_glaber_male
ENSSPUG00000015575	-	92	53.333	ENSSTOG00000027213	TREX2	92	53.333	Ictidomys_tridecemlineatus
ENSSPUG00000015575	-	92	53.333	ENSJJAG00000012484	Trex2	92	53.333	Jaculus_jaculus
ENSSPUG00000015575	-	93	46.330	ENSLACG00000000797	-	86	46.330	Latimeria_chalumnae
ENSSPUG00000015575	-	92	50.667	ENSMOCG00000001305	Trex2	92	50.667	Microtus_ochrogaster
ENSSPUG00000015575	-	92	51.327	ENSMODG00000025322	-	91	51.327	Monodelphis_domestica
ENSSPUG00000015575	-	92	51.770	ENSMODG00000022848	-	91	51.770	Monodelphis_domestica
ENSSPUG00000015575	-	92	52.444	MGP_CAROLIEiJ_G0033149	Trex2	92	52.444	Mus_caroli
ENSSPUG00000015575	-	92	53.333	ENSMUSG00000031372	Trex2	92	53.333	Mus_musculus
ENSSPUG00000015575	-	92	52.889	MGP_PahariEiJ_G0031692	Trex2	92	52.889	Mus_pahari
ENSSPUG00000015575	-	92	53.333	MGP_SPRETEiJ_G0034304	Trex2	92	53.333	Mus_spretus
ENSSPUG00000015575	-	92	52.889	ENSMPUG00000019552	TREX2	92	52.889	Mustela_putorius_furo
ENSSPUG00000015575	-	92	52.444	ENSMLUG00000027143	TREX2	92	52.444	Myotis_lucifugus
ENSSPUG00000015575	-	92	51.327	ENSMEUG00000016646	TREX2	97	51.327	Notamacropus_eugenii
ENSSPUG00000015575	-	92	54.222	ENSODEG00000019142	TREX2	84	54.222	Octodon_degus
ENSSPUG00000015575	-	92	53.097	ENSOANG00000000686	TREX2	93	53.097	Ornithorhynchus_anatinus
ENSSPUG00000015575	-	59	32.886	ENSORLG00000023958	si:ch1073-296i8.2	65	32.886	Oryzias_latipes
ENSSPUG00000015575	-	59	32.886	ENSORLG00020021912	si:ch1073-296i8.2	65	32.886	Oryzias_latipes_hni
ENSSPUG00000015575	-	59	32.886	ENSORLG00015015303	si:ch1073-296i8.2	65	32.886	Oryzias_latipes_hsok
ENSSPUG00000015575	-	92	51.556	ENSOGAG00000033175	TREX2	86	51.556	Otolemur_garnettii
ENSSPUG00000015575	-	92	52.889	ENSPPRG00000017457	TREX2	92	52.889	Panthera_pardus
ENSSPUG00000015575	-	89	50.000	ENSPSIG00000006116	TREX2	87	50.000	Pelodiscus_sinensis
ENSSPUG00000015575	-	92	52.444	ENSPEMG00000004918	Trex2	92	52.444	Peromyscus_maniculatus_bairdii
ENSSPUG00000015575	-	92	50.000	ENSPCIG00000009700	TREX2	92	50.000	Phascolarctos_cinereus
ENSSPUG00000015575	-	92	52.000	ENSPCAG00000005411	TREX2	84	52.000	Procavia_capensis
ENSSPUG00000015575	-	92	53.333	ENSPVAG00000001122	TREX2	79	53.333	Pteropus_vampyrus
ENSSPUG00000015575	-	92	52.000	ENSRNOG00000056983	Trex2	92	52.000	Rattus_norvegicus
ENSSPUG00000015575	-	92	52.212	ENSSHAG00000004059	TREX2	91	52.212	Sarcophilus_harrisii
ENSSPUG00000015575	-	99	49.027	ENSUAMG00000027544	TREX2	93	49.027	Ursus_americanus
ENSSPUG00000015575	-	97	51.440	ENSVVUG00000029714	TREX2	89	51.440	Vulpes_vulpes