EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000015582 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 12216 bases
Position: chrQEPC01000699.1:462425-474640
Accession: 17349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000020322	PRP4	PF08799.11	4.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000021642	PRPF4-201	1748	-	ENSSPUP00000020322	520 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000015582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000015582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000015582	PRPF4	56	34.074	ENSSPUG00000008656	POC1A	59	34.074
ENSSPUG00000015582	PRPF4	61	31.977	ENSSPUG00000012939	TBL3	58	31.217

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000015582	PRPF4	100	90.787	ENSG00000136875	PRPF4	100	90.787	Homo_sapiens
ENSSPUG00000015582	PRPF4	97	77.019	ENSAPOG00000014132	prpf4	99	77.019	Acanthochromis_polyacanthus
ENSSPUG00000015582	PRPF4	100	90.403	ENSAMEG00000013048	PRPF4	98	90.403	Ailuropoda_melanoleuca
ENSSPUG00000015582	PRPF4	97	76.817	ENSACIG00000005579	prpf4	99	76.817	Amphilophus_citrinellus
ENSSPUG00000015582	PRPF4	97	76.471	ENSAOCG00000005457	prpf4	99	76.471	Amphiprion_ocellaris
ENSSPUG00000015582	PRPF4	97	76.275	ENSAPEG00000000776	prpf4	99	76.275	Amphiprion_percula
ENSSPUG00000015582	PRPF4	97	76.424	ENSATEG00000023013	prpf4	99	76.424	Anabas_testudineus
ENSSPUG00000015582	PRPF4	98	91.992	ENSAPLG00000006534	PRPF4	96	91.992	Anas_platyrhynchos
ENSSPUG00000015582	PRPF4	100	91.954	ENSACAG00000015110	PRPF4	100	91.954	Anolis_carolinensis
ENSSPUG00000015582	PRPF4	100	90.595	ENSANAG00000022464	PRPF4	96	90.595	Aotus_nancymaae
ENSSPUG00000015582	PRPF4	97	76.228	ENSACLG00000019031	prpf4	99	76.228	Astatotilapia_calliptera
ENSSPUG00000015582	PRPF4	97	62.835	ENSAMXG00000006756	prpf4	99	74.111	Astyanax_mexicanus
ENSSPUG00000015582	PRPF4	100	90.403	ENSBTAG00000004571	PRPF4	100	90.403	Bos_taurus
ENSSPUG00000015582	PRPF4	85	46.136	WBGene00007972	prp-4	89	46.136	Caenorhabditis_elegans
ENSSPUG00000015582	PRPF4	100	90.230	ENSCJAG00000017856	PRPF4	100	90.230	Callithrix_jacchus
ENSSPUG00000015582	PRPF4	100	90.595	ENSCAFG00000003224	PRPF4	97	90.595	Canis_familiaris
ENSSPUG00000015582	PRPF4	100	90.595	ENSCAFG00020022637	PRPF4	100	90.595	Canis_lupus_dingo
ENSSPUG00000015582	PRPF4	100	90.038	ENSCHIG00000024648	-	100	90.038	Capra_hircus
ENSSPUG00000015582	PRPF4	100	90.211	ENSTSYG00000010366	PRPF4	100	90.211	Carlito_syrichta
ENSSPUG00000015582	PRPF4	89	83.771	ENSCAPG00000008935	PRPF4	97	83.771	Cavia_aperea
ENSSPUG00000015582	PRPF4	100	90.211	ENSCPOG00000010747	-	100	90.211	Cavia_porcellus
ENSSPUG00000015582	PRPF4	100	84.261	ENSCPOG00000014729	-	100	84.261	Cavia_porcellus
ENSSPUG00000015582	PRPF4	100	90.787	ENSCCAG00000028990	PRPF4	100	90.787	Cebus_capucinus
ENSSPUG00000015582	PRPF4	100	90.019	ENSCATG00000021552	PRPF4	100	90.403	Cercocebus_atys
ENSSPUG00000015582	PRPF4	100	90.403	ENSCLAG00000013448	PRPF4	100	90.403	Chinchilla_lanigera
ENSSPUG00000015582	PRPF4	87	91.150	ENSCHOG00000007233	PRPF4	100	91.150	Choloepus_hoffmanni
ENSSPUG00000015582	PRPF4	99	92.621	ENSCPBG00000019136	PRPF4	74	92.621	Chrysemys_picta_bellii
ENSSPUG00000015582	PRPF4	94	59.356	ENSCING00000001299	-	95	58.502	Ciona_intestinalis
ENSSPUG00000015582	PRPF4	95	58.566	ENSCSAVG00000009178	-	99	59.524	Ciona_savignyi
ENSSPUG00000015582	PRPF4	100	90.403	ENSCANG00000003246	PRPF4	100	90.403	Colobus_angolensis_palliatus
ENSSPUG00000015582	PRPF4	100	90.595	ENSCGRG00001016992	Prpf4	100	90.595	Cricetulus_griseus_chok1gshd
ENSSPUG00000015582	PRPF4	100	90.595	ENSCGRG00000017560	Prpf4	100	90.595	Cricetulus_griseus_crigri
ENSSPUG00000015582	PRPF4	97	76.331	ENSCSEG00000020451	prpf4	99	76.331	Cynoglossus_semilaevis
ENSSPUG00000015582	PRPF4	97	80.237	ENSDARG00000067639	prpf4	99	80.237	Danio_rerio
ENSSPUG00000015582	PRPF4	100	90.038	ENSDNOG00000013203	PRPF4	100	90.038	Dasypus_novemcinctus
ENSSPUG00000015582	PRPF4	100	90.979	ENSDORG00000026275	Prpf4	100	90.979	Dipodomys_ordii
ENSSPUG00000015582	PRPF4	87	56.893	FBgn0036733	U4-U6-60K	99	50.909	Drosophila_melanogaster
ENSSPUG00000015582	PRPF4	100	89.101	ENSETEG00000020389	PRPF4	100	89.101	Echinops_telfairi
ENSSPUG00000015582	PRPF4	97	71.946	ENSEBUG00000015229	prpf4	88	72.398	Eptatretus_burgeri
ENSSPUG00000015582	PRPF4	100	90.595	ENSEASG00005022678	PRPF4	100	90.595	Equus_asinus_asinus
ENSSPUG00000015582	PRPF4	100	90.595	ENSECAG00000007072	PRPF4	100	90.595	Equus_caballus
ENSSPUG00000015582	PRPF4	100	71.179	ENSEEUG00000007480	PRPF4	100	71.179	Erinaceus_europaeus
ENSSPUG00000015582	PRPF4	97	79.842	ENSELUG00000007510	prpf4	99	79.842	Esox_lucius
ENSSPUG00000015582	PRPF4	100	90.230	ENSFCAG00000005514	PRPF4	100	90.230	Felis_catus
ENSSPUG00000015582	PRPF4	98	90.807	ENSFALG00000005423	PRPF4	88	89.648	Ficedula_albicollis
ENSSPUG00000015582	PRPF4	100	90.211	ENSFDAG00000005839	PRPF4	100	90.211	Fukomys_damarensis
ENSSPUG00000015582	PRPF4	97	76.228	ENSFHEG00000001300	prpf4	99	76.228	Fundulus_heteroclitus
ENSSPUG00000015582	PRPF4	100	88.641	ENSGALG00000008857	PRPF4	100	88.641	Gallus_gallus
ENSSPUG00000015582	PRPF4	85	70.882	ENSGAFG00000012164	prpf4	70	70.882	Gambusia_affinis
ENSSPUG00000015582	PRPF4	98	69.336	ENSGACG00000015476	prpf4	99	68.945	Gasterosteus_aculeatus
ENSSPUG00000015582	PRPF4	99	93.010	ENSGAGG00000025029	PRPF4	95	93.010	Gopherus_agassizii
ENSSPUG00000015582	PRPF4	100	90.787	ENSGGOG00000006943	PRPF4	100	90.787	Gorilla_gorilla
ENSSPUG00000015582	PRPF4	97	76.031	ENSHBUG00000000562	prpf4	99	76.031	Haplochromis_burtoni
ENSSPUG00000015582	PRPF4	100	72.361	ENSHGLG00000003838	-	100	72.361	Heterocephalus_glaber_female
ENSSPUG00000015582	PRPF4	100	90.211	ENSHGLG00000015191	PRPF4	100	90.211	Heterocephalus_glaber_female
ENSSPUG00000015582	PRPF4	100	74.952	ENSHGLG00000016628	-	100	75.908	Heterocephalus_glaber_female
ENSSPUG00000015582	PRPF4	100	72.361	ENSHGLG00100005571	-	100	72.361	Heterocephalus_glaber_male
ENSSPUG00000015582	PRPF4	97	79.249	ENSIPUG00000017956	PRPF4	99	79.249	Ictalurus_punctatus
ENSSPUG00000015582	PRPF4	100	90.595	ENSSTOG00000027833	PRPF4	100	90.595	Ictidomys_tridecemlineatus
ENSSPUG00000015582	PRPF4	100	90.403	ENSJJAG00000008838	Prpf4	100	90.403	Jaculus_jaculus
ENSSPUG00000015582	PRPF4	97	76.424	ENSKMAG00000013236	prpf4	99	76.424	Kryptolebias_marmoratus
ENSSPUG00000015582	PRPF4	97	75.740	ENSLBEG00000020611	prpf4	99	75.740	Labrus_bergylta
ENSSPUG00000015582	PRPF4	99	80.777	ENSLACG00000016317	PRPF4	98	80.777	Latimeria_chalumnae
ENSSPUG00000015582	PRPF4	97	80.632	ENSLOCG00000000581	prpf4	99	80.632	Lepisosteus_oculatus
ENSSPUG00000015582	PRPF4	100	89.847	ENSLAFG00000018225	PRPF4	100	89.847	Loxodonta_africana
ENSSPUG00000015582	PRPF4	100	89.827	ENSMFAG00000039397	PRPF4	100	90.211	Macaca_fascicularis
ENSSPUG00000015582	PRPF4	100	90.019	ENSMMUG00000005844	PRPF4	100	90.403	Macaca_mulatta
ENSSPUG00000015582	PRPF4	100	80.614	ENSMNEG00000033737	PRPF4	100	80.998	Macaca_nemestrina
ENSSPUG00000015582	PRPF4	100	90.019	ENSMLEG00000040284	PRPF4	100	90.403	Mandrillus_leucophaeus
ENSSPUG00000015582	PRPF4	98	75.278	ENSMAMG00000020141	prpf4	99	76.228	Mastacembelus_armatus
ENSSPUG00000015582	PRPF4	97	76.228	ENSMZEG00005023205	prpf4	99	76.228	Maylandia_zebra
ENSSPUG00000015582	PRPF4	98	91.781	ENSMGAG00000001796	PRPF4	95	91.781	Meleagris_gallopavo
ENSSPUG00000015582	PRPF4	98	90.980	ENSMAUG00000018022	Prpf4	100	90.403	Mesocricetus_auratus
ENSSPUG00000015582	PRPF4	100	90.230	ENSMICG00000015022	PRPF4	100	90.230	Microcebus_murinus
ENSSPUG00000015582	PRPF4	100	90.211	ENSMOCG00000018273	Prpf4	100	90.211	Microtus_ochrogaster
ENSSPUG00000015582	PRPF4	97	75.937	ENSMMOG00000021177	prpf4	99	75.937	Mola_mola
ENSSPUG00000015582	PRPF4	100	89.675	ENSMODG00000025096	-	97	89.675	Monodelphis_domestica
ENSSPUG00000015582	PRPF4	100	89.484	ENSMODG00000004444	-	100	89.484	Monodelphis_domestica
ENSSPUG00000015582	PRPF4	97	76.424	ENSMALG00000013624	prpf4	99	76.424	Monopterus_albus
ENSSPUG00000015582	PRPF4	100	90.403	MGP_CAROLIEiJ_G0026078	Prpf4	100	90.403	Mus_caroli
ENSSPUG00000015582	PRPF4	100	90.403	ENSMUSG00000066148	Prpf4	100	90.403	Mus_musculus
ENSSPUG00000015582	PRPF4	100	90.211	MGP_PahariEiJ_G0028413	Prpf4	100	90.211	Mus_pahari
ENSSPUG00000015582	PRPF4	100	90.403	MGP_SPRETEiJ_G0027042	Prpf4	100	90.403	Mus_spretus
ENSSPUG00000015582	PRPF4	100	90.403	ENSMPUG00000007883	PRPF4	100	90.403	Mustela_putorius_furo
ENSSPUG00000015582	PRPF4	100	90.403	ENSMLUG00000015309	-	97	90.403	Myotis_lucifugus
ENSSPUG00000015582	PRPF4	100	88.676	ENSMLUG00000008626	-	97	88.676	Myotis_lucifugus
ENSSPUG00000015582	PRPF4	100	85.029	ENSNGAG00000000468	Prpf4	100	85.029	Nannospalax_galili
ENSSPUG00000015582	PRPF4	97	76.424	ENSNBRG00000007972	prpf4	99	76.424	Neolamprologus_brichardi
ENSSPUG00000015582	PRPF4	100	90.595	ENSNLEG00000016647	PRPF4	100	90.595	Nomascus_leucogenys
ENSSPUG00000015582	PRPF4	98	90.766	ENSMEUG00000013256	PRPF4	99	90.766	Notamacropus_eugenii
ENSSPUG00000015582	PRPF4	100	90.038	ENSOPRG00000005302	PRPF4	100	90.038	Ochotona_princeps
ENSSPUG00000015582	PRPF4	100	90.595	ENSODEG00000018147	PRPF4	100	90.595	Octodon_degus
ENSSPUG00000015582	PRPF4	97	76.228	ENSONIG00000012671	prpf4	99	76.228	Oreochromis_niloticus
ENSSPUG00000015582	PRPF4	100	90.787	ENSOCUG00000005046	PRPF4	100	90.787	Oryctolagus_cuniculus
ENSSPUG00000015582	PRPF4	97	74.556	ENSORLG00000019641	prpf4	99	74.556	Oryzias_latipes
ENSSPUG00000015582	PRPF4	97	74.556	ENSORLG00020019438	prpf4	99	74.556	Oryzias_latipes_hni
ENSSPUG00000015582	PRPF4	97	75.000	ENSOMEG00000020941	prpf4	99	75.000	Oryzias_melastigma
ENSSPUG00000015582	PRPF4	100	87.332	ENSOGAG00000007802	PRPF4	98	87.332	Otolemur_garnettii
ENSSPUG00000015582	PRPF4	100	90.403	ENSOARG00000006319	PRPF4	97	90.403	Ovis_aries
ENSSPUG00000015582	PRPF4	100	90.787	ENSPPAG00000041797	PRPF4	100	90.787	Pan_paniscus
ENSSPUG00000015582	PRPF4	100	90.595	ENSPPRG00000014360	PRPF4	100	90.595	Panthera_pardus
ENSSPUG00000015582	PRPF4	100	90.595	ENSPTIG00000009574	PRPF4	100	90.595	Panthera_tigris_altaica
ENSSPUG00000015582	PRPF4	100	90.787	ENSPTRG00000021274	PRPF4	100	90.421	Pan_troglodytes
ENSSPUG00000015582	PRPF4	100	89.827	ENSPANG00000025776	PRPF4	96	90.211	Papio_anubis
ENSSPUG00000015582	PRPF4	97	81.225	ENSPKIG00000017259	prpf4	99	81.225	Paramormyrops_kingsleyae
ENSSPUG00000015582	PRPF4	98	93.333	ENSPSIG00000010713	PRPF4	90	93.333	Pelodiscus_sinensis
ENSSPUG00000015582	PRPF4	98	58.652	ENSPMGG00000000997	prpf4	99	58.470	Periophthalmus_magnuspinnatus
ENSSPUG00000015582	PRPF4	100	90.595	ENSPEMG00000024115	Prpf4	100	90.595	Peromyscus_maniculatus_bairdii
ENSSPUG00000015582	PRPF4	98	90.766	ENSPCIG00000003821	PRPF4	99	90.766	Phascolarctos_cinereus
ENSSPUG00000015582	PRPF4	98	69.709	ENSPFOG00000013524	prpf4	99	72.561	Poecilia_formosa
ENSSPUG00000015582	PRPF4	82	71.429	ENSPLAG00000011620	prpf4	99	68.997	Poecilia_latipinna
ENSSPUG00000015582	PRPF4	95	73.373	ENSPMEG00000006813	prpf4	99	73.373	Poecilia_mexicana
ENSSPUG00000015582	PRPF4	98	91.159	ENSPCAG00000002561	PRPF4	99	91.159	Procavia_capensis
ENSSPUG00000015582	PRPF4	98	91.569	ENSPCOG00000011975	PRPF4	100	90.979	Propithecus_coquereli
ENSSPUG00000015582	PRPF4	100	86.590	ENSPVAG00000004708	PRPF4	100	86.590	Pteropus_vampyrus
ENSSPUG00000015582	PRPF4	97	76.228	ENSPNYG00000008013	prpf4	99	76.228	Pundamilia_nyererei
ENSSPUG00000015582	PRPF4	97	80.040	ENSPNAG00000000697	prpf4	99	80.040	Pygocentrus_nattereri
ENSSPUG00000015582	PRPF4	100	90.211	ENSRNOG00000014777	Prpf4	100	90.211	Rattus_norvegicus
ENSSPUG00000015582	PRPF4	100	90.403	ENSRBIG00000040221	PRPF4	100	90.403	Rhinopithecus_bieti
ENSSPUG00000015582	PRPF4	100	90.403	ENSRROG00000040240	PRPF4	100	90.403	Rhinopithecus_roxellana
ENSSPUG00000015582	PRPF4	100	90.057	ENSSHAG00000017658	PRPF4	100	90.057	Sarcophilus_harrisii
ENSSPUG00000015582	PRPF4	97	82.213	ENSSFOG00015008963	prpf4	99	82.213	Scleropages_formosus
ENSSPUG00000015582	PRPF4	97	75.835	ENSSMAG00000008889	prpf4	99	75.835	Scophthalmus_maximus
ENSSPUG00000015582	PRPF4	97	72.978	ENSSDUG00000022083	prpf4	99	73.176	Seriola_dumerili
ENSSPUG00000015582	PRPF4	97	72.978	ENSSLDG00000008115	prpf4	99	73.176	Seriola_lalandi_dorsalis
ENSSPUG00000015582	PRPF4	97	70.898	ENSSPAG00000011286	prpf4	99	70.898	Stegastes_partitus
ENSSPUG00000015582	PRPF4	100	90.595	ENSSSCG00000024648	PRPF4	100	90.595	Sus_scrofa
ENSSPUG00000015582	PRPF4	96	91.583	ENSTGUG00000002623	PRPF4	100	92.638	Taeniopygia_guttata
ENSSPUG00000015582	PRPF4	97	76.772	ENSTRUG00000008853	prpf4	99	76.772	Takifugu_rubripes
ENSSPUG00000015582	PRPF4	97	76.726	ENSTNIG00000013250	prpf4	99	76.726	Tetraodon_nigroviridis
ENSSPUG00000015582	PRPF4	100	82.184	ENSTBEG00000000821	PRPF4	100	82.184	Tupaia_belangeri
ENSSPUG00000015582	PRPF4	82	93.023	ENSTTRG00000003246	PRPF4	85	93.023	Tursiops_truncatus
ENSSPUG00000015582	PRPF4	64	85.329	ENSUAMG00000018288	PRPF4	88	88.925	Ursus_americanus
ENSSPUG00000015582	PRPF4	100	89.635	ENSUMAG00000019375	PRPF4	100	89.635	Ursus_maritimus
ENSSPUG00000015582	PRPF4	100	90.421	ENSVPAG00000005281	PRPF4	100	90.421	Vicugna_pacos
ENSSPUG00000015582	PRPF4	100	89.524	ENSVVUG00000002476	PRPF4	99	90.891	Vulpes_vulpes
ENSSPUG00000015582	PRPF4	69	58.056	ENSXCOG00000006101	prpf4	93	59.406	Xiphophorus_couchianus
ENSSPUG00000015582	PRPF4	88	63.853	ENSXMAG00000002750	prpf4	99	64.694	Xiphophorus_maculatus