EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000015890 (Gene tree)
Gene ID: -
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 53655 bases
Position: chrQEPC01002422.1:978732-1032386
Accession: 16638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000020719	PWI	PF01480.17	5.7e-30	1	1
ENSSPUP00000020693	PWI	PF01480.17	5.8e-30	1	1
ENSSPUP00000020711	PWI	PF01480.17	5.9e-30	1	1
ENSSPUP00000020681	PWI	PF01480.17	5.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000022075	SRRM1-204	2932	-	ENSSPUP00000020719	899 (aa)	-	-
ENSSPUT00000022049	SRRM1-202	2962	-	ENSSPUP00000020693	909 (aa)	-	-
ENSSPUT00000022037	SRRM1-201	3004	-	ENSSPUP00000020681	923 (aa)	-	-
ENSSPUT00000022067	SRRM1-203	2933	-	ENSSPUP00000020711	940 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000015890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000015890's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000015890	SRRM1	57	83.026	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSSPUG00000015890	SRRM1	57	80.627	ENSAMEG00000010075	SRRM1	60	71.698	Ailuropoda_melanoleuca
ENSSPUG00000015890	SRRM1	62	84.615	ENSACAG00000017848	SRRM1	100	82.378	Anolis_carolinensis
ENSSPUG00000015890	SRRM1	57	82.472	ENSANAG00000035606	SRRM1	67	87.500	Aotus_nancymaae
ENSSPUG00000015890	SRRM1	57	81.734	ENSCJAG00000020822	SRRM1	65	69.983	Callithrix_jacchus
ENSSPUG00000015890	SRRM1	57	78.664	ENSCAFG00020020948	SRRM1	68	88.129	Canis_lupus_dingo
ENSSPUG00000015890	SRRM1	57	83.026	ENSTSYG00000006782	SRRM1	62	71.821	Carlito_syrichta
ENSSPUG00000015890	SRRM1	57	82.103	ENSCCAG00000029474	SRRM1	67	87.681	Cebus_capucinus
ENSSPUG00000015890	SRRM1	57	82.657	ENSCATG00000031303	SRRM1	60	73.519	Cercocebus_atys
ENSSPUG00000015890	SRRM1	57	82.963	ENSFCAG00000000678	-	60	71.870	Felis_catus
ENSSPUG00000015890	SRRM1	58	87.796	ENSGAGG00000009243	SRRM1	59	83.971	Gopherus_agassizii
ENSSPUG00000015890	SRRM1	57	83.026	ENSGGOG00000005209	SRRM1	67	88.129	Gorilla_gorilla
ENSSPUG00000015890	SRRM1	57	82.472	ENSSTOG00000014640	SRRM1	60	71.184	Ictidomys_tridecemlineatus
ENSSPUG00000015890	SRRM1	57	82.841	ENSMFAG00000025726	SRRM1	66	73.693	Macaca_fascicularis
ENSSPUG00000015890	SRRM1	57	82.841	ENSMMUG00000006645	SRRM1	59	73.693	Macaca_mulatta
ENSSPUG00000015890	SRRM1	57	82.657	ENSMNEG00000039415	SRRM1	60	73.519	Macaca_nemestrina
ENSSPUG00000015890	SRRM1	57	71.715	ENSMLEG00000038030	-	59	65.165	Mandrillus_leucophaeus
ENSSPUG00000015890	SRRM1	57	83.026	ENSMICG00000006553	SRRM1	62	72.077	Microcebus_murinus
ENSSPUG00000015890	SRRM1	57	83.026	ENSNLEG00000008966	SRRM1	67	88.129	Nomascus_leucogenys
ENSSPUG00000015890	SRRM1	57	78.821	ENSOCUG00000008438	SRRM1	60	74.132	Oryctolagus_cuniculus
ENSSPUG00000015890	SRRM1	57	82.841	ENSPPAG00000043918	SRRM1	67	88.129	Pan_paniscus
ENSSPUG00000015890	SRRM1	57	82.963	ENSPPRG00000002509	SRRM1	60	71.870	Panthera_pardus
ENSSPUG00000015890	SRRM1	58	82.940	ENSPTIG00000008778	-	62	72.213	Panthera_tigris_altaica
ENSSPUG00000015890	SRRM1	57	83.026	ENSPTRG00000000349	SRRM1	66	73.868	Pan_troglodytes
ENSSPUG00000015890	SRRM1	57	81.146	ENSPANG00000010194	SRRM1	59	73.090	Papio_anubis
ENSSPUG00000015890	SRRM1	57	88.024	ENSPCAG00000015138	SRRM1	54	81.935	Procavia_capensis
ENSSPUG00000015890	SRRM1	57	82.472	ENSPVAG00000005836	SRRM1	60	71.355	Pteropus_vampyrus
ENSSPUG00000015890	SRRM1	57	82.657	ENSRROG00000035151	SRRM1	60	73.519	Rhinopithecus_roxellana
ENSSPUG00000015890	SRRM1	56	81.169	ENSSARG00000013718	SRRM1	52	82.243	Sorex_araneus
ENSSPUG00000015890	SRRM1	58	82.214	ENSSSCG00000032947	SRRM1	66	72.997	Sus_scrofa
ENSSPUG00000015890	SRRM1	57	81.734	ENSTBEG00000000100	SRRM1	60	68.611	Tupaia_belangeri
ENSSPUG00000015890	SRRM1	57	75.696	ENSVVUG00000026966	SRRM1	52	96.875	Vulpes_vulpes