EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000015952 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 17114 bases
Position: chrQEPC01009510.1:221681-238794
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000020766	zf-C2H2	PF00096.26	4.2e-22	1	5
ENSSPUP00000020766	zf-C2H2	PF00096.26	4.2e-22	2	5
ENSSPUP00000020766	zf-C2H2	PF00096.26	4.2e-22	3	5
ENSSPUP00000020766	zf-C2H2	PF00096.26	4.2e-22	4	5
ENSSPUP00000020766	zf-C2H2	PF00096.26	4.2e-22	5	5
ENSSPUP00000020766	zf-met	PF12874.7	4.3e-10	1	2
ENSSPUP00000020766	zf-met	PF12874.7	4.3e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000022131	-	1064	-	ENSSPUP00000020766	333 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000015952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000015952's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000015952	-	59	35.000	ENSSPUG00000009941	PRDM5	83	37.209
ENSSPUG00000015952	-	57	40.667	ENSSPUG00000018867	-	89	40.909
ENSSPUG00000015952	-	53	42.484	ENSSPUG00000010016	-	88	42.484
ENSSPUG00000015952	-	53	40.132	ENSSPUG00000007147	-	84	41.333
ENSSPUG00000015952	-	54	34.314	ENSSPUG00000001720	OVOL2	61	34.314
ENSSPUG00000015952	-	53	40.909	ENSSPUG00000000136	-	91	42.282
ENSSPUG00000015952	-	74	44.375	ENSSPUG00000010059	-	79	44.000
ENSSPUG00000015952	-	50	41.259	ENSSPUG00000009898	-	92	41.935
ENSSPUG00000015952	-	53	40.000	ENSSPUG00000004366	-	56	41.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000015952	-	57	43.956	ENSAPOG00000005023	-	84	43.956	Acanthochromis_polyacanthus
ENSSPUG00000015952	-	50	47.253	ENSCVAG00000001369	-	73	47.253	Cyprinodon_variegatus
ENSSPUG00000015952	-	58	39.706	ENSCVAG00000000419	-	65	39.706	Cyprinodon_variegatus
ENSSPUG00000015952	-	51	40.845	ENSCVAG00000003428	-	96	40.845	Cyprinodon_variegatus
ENSSPUG00000015952	-	50	41.333	ENSCVAG00000011469	-	75	41.333	Cyprinodon_variegatus
ENSSPUG00000015952	-	56	40.789	ENSCVAG00000012216	-	85	40.940	Cyprinodon_variegatus
ENSSPUG00000015952	-	52	42.029	ENSCVAG00000006460	-	73	42.029	Cyprinodon_variegatus
ENSSPUG00000015952	-	50	39.130	ENSCVAG00000011213	-	95	39.869	Cyprinodon_variegatus
ENSSPUG00000015952	-	62	40.667	ENSCVAG00000002305	-	75	40.667	Cyprinodon_variegatus
ENSSPUG00000015952	-	54	39.597	ENSEBUG00000016281	-	89	42.282	Eptatretus_burgeri
ENSSPUG00000015952	-	67	38.926	ENSEBUG00000014659	-	61	41.045	Eptatretus_burgeri
ENSSPUG00000015952	-	53	41.611	ENSEBUG00000008273	-	79	41.611	Eptatretus_burgeri
ENSSPUG00000015952	-	54	38.255	ENSEBUG00000008272	-	66	39.597	Eptatretus_burgeri
ENSSPUG00000015952	-	53	43.820	ENSEBUG00000015110	-	66	43.820	Eptatretus_burgeri
ENSSPUG00000015952	-	50	37.662	ENSEBUG00000009436	-	91	37.662	Eptatretus_burgeri
ENSSPUG00000015952	-	53	38.000	ENSEBUG00000003954	-	70	38.000	Eptatretus_burgeri
ENSSPUG00000015952	-	50	40.580	ENSEBUG00000002146	-	68	40.580	Eptatretus_burgeri
ENSSPUG00000015952	-	53	38.060	ENSEBUG00000008229	-	54	38.060	Eptatretus_burgeri
ENSSPUG00000015952	-	53	39.597	ENSEBUG00000015207	-	61	39.597	Eptatretus_burgeri
ENSSPUG00000015952	-	70	41.304	ENSEBUG00000007143	-	64	41.611	Eptatretus_burgeri
ENSSPUG00000015952	-	54	42.953	ENSEBUG00000007386	-	75	42.953	Eptatretus_burgeri
ENSSPUG00000015952	-	50	42.953	ENSEBUG00000004026	-	65	42.953	Eptatretus_burgeri
ENSSPUG00000015952	-	56	42.857	ENSEBUG00000009330	-	61	42.857	Eptatretus_burgeri
ENSSPUG00000015952	-	67	37.584	ENSEBUG00000005785	-	67	37.333	Eptatretus_burgeri
ENSSPUG00000015952	-	53	36.913	ENSEBUG00000010357	-	63	37.086	Eptatretus_burgeri
ENSSPUG00000015952	-	50	40.206	ENSEBUG00000001943	-	94	40.206	Eptatretus_burgeri
ENSSPUG00000015952	-	51	40.523	ENSEBUG00000014469	-	75	40.523	Eptatretus_burgeri
ENSSPUG00000015952	-	65	38.926	ENSEBUG00000011728	-	74	38.926	Eptatretus_burgeri
ENSSPUG00000015952	-	54	39.597	ENSEBUG00000010031	-	68	39.597	Eptatretus_burgeri
ENSSPUG00000015952	-	53	40.268	ENSEBUG00000004844	-	59	40.268	Eptatretus_burgeri
ENSSPUG00000015952	-	54	43.836	ENSEBUG00000015693	-	79	43.836	Eptatretus_burgeri
ENSSPUG00000015952	-	53	42.282	ENSEBUG00000006212	-	91	40.940	Eptatretus_burgeri
ENSSPUG00000015952	-	61	40.310	ENSFHEG00000013460	-	58	40.310	Fundulus_heteroclitus
ENSSPUG00000015952	-	53	42.000	ENSFHEG00000021772	-	74	42.000	Fundulus_heteroclitus
ENSSPUG00000015952	-	50	44.295	ENSFHEG00000000627	-	71	44.295	Fundulus_heteroclitus
ENSSPUG00000015952	-	53	40.984	ENSFHEG00000002625	-	82	40.984	Fundulus_heteroclitus
ENSSPUG00000015952	-	53	38.255	ENSFHEG00000019159	-	98	38.255	Fundulus_heteroclitus
ENSSPUG00000015952	-	50	43.919	ENSFHEG00000016699	-	68	43.919	Fundulus_heteroclitus
ENSSPUG00000015952	-	53	43.119	ENSFHEG00000000851	-	97	44.000	Fundulus_heteroclitus
ENSSPUG00000015952	-	62	42.208	ENSFHEG00000013087	-	68	42.282	Fundulus_heteroclitus
ENSSPUG00000015952	-	56	45.745	ENSFHEG00000013129	-	57	45.745	Fundulus_heteroclitus
ENSSPUG00000015952	-	64	39.189	ENSFHEG00000011944	-	82	47.917	Fundulus_heteroclitus
ENSSPUG00000015952	-	52	43.624	ENSFHEG00000016749	-	90	43.624	Fundulus_heteroclitus
ENSSPUG00000015952	-	54	40.909	ENSGAFG00000013055	-	63	40.909	Gambusia_affinis
ENSSPUG00000015952	-	52	42.581	ENSGAFG00000013616	-	71	43.046	Gambusia_affinis
ENSSPUG00000015952	-	54	42.208	ENSGAFG00000013677	-	87	42.208	Gambusia_affinis
ENSSPUG00000015952	-	56	37.696	ENSGAFG00000013019	-	79	42.000	Gambusia_affinis
ENSSPUG00000015952	-	53	36.232	ENSHBUG00000014494	-	58	38.843	Haplochromis_burtoni
ENSSPUG00000015952	-	50	44.118	ENSHCOG00000003085	-	67	44.118	Hippocampus_comes
ENSSPUG00000015952	-	55	42.857	ENSHCOG00000008168	-	97	42.208	Hippocampus_comes
ENSSPUG00000015952	-	50	40.800	ENSHCOG00000020725	-	63	42.000	Hippocampus_comes
ENSSPUG00000015952	-	56	41.333	ENSHCOG00000019438	-	86	41.611	Hippocampus_comes
ENSSPUG00000015952	-	50	40.268	ENSHCOG00000000517	-	74	40.268	Hippocampus_comes
ENSSPUG00000015952	-	50	42.000	ENSHCOG00000015476	-	89	42.667	Hippocampus_comes
ENSSPUG00000015952	-	50	39.450	ENSHCOG00000019385	-	70	40.268	Hippocampus_comes
ENSSPUG00000015952	-	56	42.012	ENSHCOG00000007664	-	97	42.342	Hippocampus_comes
ENSSPUG00000015952	-	50	41.611	ENSHCOG00000015010	-	56	41.611	Hippocampus_comes
ENSSPUG00000015952	-	50	40.000	ENSHCOG00000020856	-	77	40.000	Hippocampus_comes
ENSSPUG00000015952	-	50	41.611	ENSHCOG00000007990	-	70	41.611	Hippocampus_comes
ENSSPUG00000015952	-	65	38.667	ENSHCOG00000007485	-	92	42.208	Hippocampus_comes
ENSSPUG00000015952	-	50	40.828	ENSHCOG00000015105	-	85	44.000	Hippocampus_comes
ENSSPUG00000015952	-	59	39.610	ENSKMAG00000000668	-	76	40.940	Kryptolebias_marmoratus
ENSSPUG00000015952	-	50	41.060	ENSKMAG00000000689	-	93	41.060	Kryptolebias_marmoratus
ENSSPUG00000015952	-	52	43.750	ENSKMAG00000003121	-	83	43.750	Kryptolebias_marmoratus
ENSSPUG00000015952	-	52	35.915	ENSMALG00000012056	-	95	36.686	Monopterus_albus
ENSSPUG00000015952	-	50	37.857	ENSMLUG00000003468	-	95	37.857	Myotis_lucifugus
ENSSPUG00000015952	-	50	45.333	ENSORLG00020017483	-	86	45.333	Oryzias_latipes_hni
ENSSPUG00000015952	-	51	46.000	ENSORLG00015014015	-	89	46.000	Oryzias_latipes_hsok
ENSSPUG00000015952	-	54	45.033	ENSOMEG00000023744	-	95	45.033	Oryzias_melastigma
ENSSPUG00000015952	-	53	45.522	ENSOMEG00000022915	-	87	45.522	Oryzias_melastigma
ENSSPUG00000015952	-	53	41.497	ENSPMGG00000022526	-	70	41.892	Periophthalmus_magnuspinnatus
ENSSPUG00000015952	-	57	37.888	ENSPMGG00000001113	-	92	42.424	Periophthalmus_magnuspinnatus
ENSSPUG00000015952	-	54	37.079	ENSPMGG00000018355	-	95	38.384	Periophthalmus_magnuspinnatus
ENSSPUG00000015952	-	55	41.611	ENSPMGG00000004183	-	92	41.429	Periophthalmus_magnuspinnatus
ENSSPUG00000015952	-	50	42.202	ENSPMGG00000017333	-	61	42.202	Periophthalmus_magnuspinnatus
ENSSPUG00000015952	-	52	40.909	ENSPMGG00000001405	-	80	41.176	Periophthalmus_magnuspinnatus
ENSSPUG00000015952	-	54	44.079	ENSPMGG00000004360	-	95	44.079	Periophthalmus_magnuspinnatus
ENSSPUG00000015952	-	56	40.667	ENSPMGG00000024134	-	85	40.667	Periophthalmus_magnuspinnatus
ENSSPUG00000015952	-	56	39.333	ENSPMGG00000011056	-	78	42.953	Periophthalmus_magnuspinnatus
ENSSPUG00000015952	-	52	37.423	ENSPMGG00000004906	-	85	38.158	Periophthalmus_magnuspinnatus
ENSSPUG00000015952	-	50	39.735	ENSPMGG00000012849	-	82	39.735	Periophthalmus_magnuspinnatus
ENSSPUG00000015952	-	50	42.029	ENSPMGG00000022430	-	80	42.029	Periophthalmus_magnuspinnatus
ENSSPUG00000015952	-	50	42.308	ENSPFOG00000018784	-	99	43.137	Poecilia_formosa
ENSSPUG00000015952	-	62	45.000	ENSPFOG00000023968	-	68	45.000	Poecilia_formosa
ENSSPUG00000015952	-	51	39.073	ENSPFOG00000024593	-	63	39.333	Poecilia_formosa
ENSSPUG00000015952	-	52	43.871	ENSPFOG00000018776	-	100	43.871	Poecilia_formosa
ENSSPUG00000015952	-	67	38.849	ENSPFOG00000018580	-	99	45.455	Poecilia_formosa
ENSSPUG00000015952	-	67	42.282	ENSPLAG00000010234	-	90	42.282	Poecilia_latipinna
ENSSPUG00000015952	-	67	38.849	ENSPLAG00000016585	-	64	40.000	Poecilia_latipinna
ENSSPUG00000015952	-	51	41.611	ENSPLAG00000015192	-	73	41.611	Poecilia_latipinna
ENSSPUG00000015952	-	54	44.578	ENSPLAG00000020864	-	76	44.578	Poecilia_latipinna
ENSSPUG00000015952	-	52	41.935	ENSPLAG00000008557	-	70	42.384	Poecilia_latipinna
ENSSPUG00000015952	-	74	40.141	ENSPLAG00000010230	-	67	40.984	Poecilia_latipinna
ENSSPUG00000015952	-	50	42.667	ENSPLAG00000016616	-	87	42.667	Poecilia_latipinna
ENSSPUG00000015952	-	53	42.384	ENSPLAG00000021218	-	77	42.384	Poecilia_latipinna
ENSSPUG00000015952	-	51	41.611	ENSPMEG00000014146	-	73	41.611	Poecilia_mexicana
ENSSPUG00000015952	-	53	43.046	ENSPREG00000002181	-	97	42.000	Poecilia_reticulata
ENSSPUG00000015952	-	52	42.581	ENSPREG00000014340	-	72	43.046	Poecilia_reticulata
ENSSPUG00000015952	-	60	41.216	ENSPREG00000014477	-	93	42.484	Poecilia_reticulata
ENSSPUG00000015952	-	53	42.282	ENSPREG00000003393	-	73	42.282	Poecilia_reticulata
ENSSPUG00000015952	-	55	36.126	ENSPREG00000016249	-	74	40.476	Poecilia_reticulata
ENSSPUG00000015952	-	67	37.762	ENSPREG00000013727	-	71	39.333	Poecilia_reticulata
ENSSPUG00000015952	-	74	39.344	ENSPNAG00000007237	-	57	30.488	Pygocentrus_nattereri
ENSSPUG00000015952	-	51	40.268	ENSSLDG00000001850	-	52	40.268	Seriola_lalandi_dorsalis
ENSSPUG00000015952	-	54	43.820	ENSXCOG00000003472	-	83	43.820	Xiphophorus_couchianus
ENSSPUG00000015952	-	62	41.611	ENSXCOG00000007376	-	92	42.000	Xiphophorus_couchianus
ENSSPUG00000015952	-	53	39.597	ENSXCOG00000012921	-	94	42.958	Xiphophorus_couchianus
ENSSPUG00000015952	-	58	44.000	ENSXMAG00000027705	-	79	44.000	Xiphophorus_maculatus
ENSSPUG00000015952	-	60	41.333	ENSXMAG00000026295	-	94	41.333	Xiphophorus_maculatus
ENSSPUG00000015952	-	52	40.141	ENSXMAG00000027682	-	68	46.809	Xiphophorus_maculatus
ENSSPUG00000015952	-	66	40.789	ENSXMAG00000021578	-	85	40.789	Xiphophorus_maculatus
ENSSPUG00000015952	-	50	43.529	ENSXMAG00000026287	-	89	43.529	Xiphophorus_maculatus
ENSSPUG00000015952	-	67	38.235	ENSXMAG00000028040	-	90	40.789	Xiphophorus_maculatus