EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000015974 (Gene tree)
Gene ID: -
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 70676 bases
Position: chrQEPC01007860.1:1682912-1753587
Accession: 29011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000020826	UvrD-helicase	PF00580.21	4.9e-06	1	1
ENSSPUP00000020816	UvrD-helicase	PF00580.21	1.1e-05	1	1
ENSSPUP00000020803	UvrD-helicase	PF00580.21	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000022169	TRANK1-201	7528	-	ENSSPUP00000020803	2155 (aa)	-	-
ENSSPUT00000022193	TRANK1-203	4595	-	ENSSPUP00000020826	1253 (aa)	-	-
ENSSPUT00000022183	TRANK1-202	7426	-	ENSSPUP00000020816	2121 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000015974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000015974's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000015974	TRANK1	92	74.721	ENSAPLG00000010356	TRANK1	87	65.962	Anas_platyrhynchos
ENSSPUG00000015974	TRANK1	93	77.626	ENSTSYG00000025860	TRANK1	73	66.759	Carlito_syrichta
ENSSPUG00000015974	TRANK1	93	76.923	ENSCLAG00000003643	TRANK1	74	66.544	Chinchilla_lanigera
ENSSPUG00000015974	TRANK1	95	83.957	ENSCPBG00000013529	TRANK1	74	79.299	Chrysemys_picta_bellii
ENSSPUG00000015974	TRANK1	93	76.989	ENSCANG00000039915	TRANK1	73	67.066	Colobus_angolensis_palliatus
ENSSPUG00000015974	TRANK1	93	76.048	ENSDNOG00000003573	TRANK1	71	66.524	Dasypus_novemcinctus
ENSSPUG00000015974	TRANK1	55	71.695	ENSETEG00000009306	-	100	71.347	Echinops_telfairi
ENSSPUG00000015974	TRANK1	94	75.692	ENSEASG00005007374	TRANK1	68	72.435	Equus_asinus_asinus
ENSSPUG00000015974	TRANK1	94	75.755	ENSECAG00000018264	TRANK1	72	67.448	Equus_caballus
ENSSPUG00000015974	TRANK1	92	73.230	ENSEEUG00000008528	TRANK1	86	64.611	Erinaceus_europaeus
ENSSPUG00000015974	TRANK1	92	74.957	ENSFALG00000002875	TRANK1	72	66.283	Ficedula_albicollis
ENSSPUG00000015974	TRANK1	87	76.251	ENSGALG00000037629	TRANK1	61	76.355	Gallus_gallus
ENSSPUG00000015974	TRANK1	95	83.375	ENSGAGG00000009012	TRANK1	80	78.746	Gopherus_agassizii
ENSSPUG00000015974	TRANK1	92	65.891	ENSLOCG00000004808	TRANK1	74	52.742	Lepisosteus_oculatus
ENSSPUG00000015974	TRANK1	92	76.359	ENSMGAG00000011934	TRANK1	73	67.373	Meleagris_gallopavo
ENSSPUG00000015974	TRANK1	93	75.771	ENSMLUG00000003537	TRANK1	74	66.513	Myotis_lucifugus
ENSSPUG00000015974	TRANK1	93	77.009	ENSODEG00000003882	TRANK1	72	67.004	Octodon_degus
ENSSPUG00000015974	TRANK1	92	85.233	ENSPSIG00000010217	TRANK1	72	77.706	Pelodiscus_sinensis
ENSSPUG00000015974	TRANK1	85	67.600	ENSPCAG00000002172	-	82	67.600	Procavia_capensis
ENSSPUG00000015974	TRANK1	92	72.444	ENSPVAG00000004199	TRANK1	90	62.667	Pteropus_vampyrus
ENSSPUG00000015974	TRANK1	93	77.160	ENSRBIG00000012281	TRANK1	73	67.204	Rhinopithecus_bieti
ENSSPUG00000015974	TRANK1	93	77.246	ENSRROG00000044487	TRANK1	73	67.250	Rhinopithecus_roxellana
ENSSPUG00000015974	TRANK1	68	75.901	ENSSARG00000007861	-	60	75.776	Sorex_araneus
ENSSPUG00000015974	TRANK1	92	75.475	ENSTGUG00000005694	TRANK1	87	66.667	Taeniopygia_guttata
ENSSPUG00000015974	TRANK1	64	76.010	ENSUMAG00000006416	TRANK1	50	77.396	Ursus_maritimus