EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000016039 (Gene tree)
Gene ID: -
Gene Symbol: GFI1B
Alias: ZNF163B
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 17502 bases
Position: chrQEPC01004477.1:624848-642349
Accession: 4238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000020874	zf-C2H2	PF00096.26	2.3e-19	1	4
ENSSPUP00000020874	zf-C2H2	PF00096.26	2.3e-19	2	4
ENSSPUP00000020874	zf-C2H2	PF00096.26	2.3e-19	3	4
ENSSPUP00000020874	zf-C2H2	PF00096.26	2.3e-19	4	4
ENSSPUP00000020874	zf-met	PF12874.7	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000022244	GFI1B-201	1011	-	ENSSPUP00000020874	336 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000016039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000016039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000016039	GFI1B	53	55.000	ENSSPUG00000009898	-	91	54.639
ENSSPUG00000016039	GFI1B	50	53.398	ENSSPUG00000010016	-	88	53.398
ENSSPUG00000016039	GFI1B	55	51.402	ENSSPUG00000000229	-	87	51.402
ENSSPUG00000016039	GFI1B	50	53.398	ENSSPUG00000010059	-	80	53.398
ENSSPUG00000016039	GFI1B	55	51.961	ENSSPUG00000007147	-	92	51.961
ENSSPUG00000016039	GFI1B	62	49.524	ENSSPUG00000007092	-	53	49.524
ENSSPUG00000016039	GFI1B	93	43.636	ENSSPUG00000014346	MYNN	59	43.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000016039	GFI1B	100	48.830	ENSAPOG00000001296	gfi1b	100	48.830	Acanthochromis_polyacanthus
ENSSPUG00000016039	GFI1B	66	60.619	ENSACIG00000002190	gfi1b	73	60.619	Amphilophus_citrinellus
ENSSPUG00000016039	GFI1B	100	49.419	ENSAOCG00000021187	gfi1b	100	49.419	Amphiprion_ocellaris
ENSSPUG00000016039	GFI1B	100	49.565	ENSAPEG00000016196	gfi1b	100	49.565	Amphiprion_percula
ENSSPUG00000016039	GFI1B	100	50.729	ENSATEG00000002534	gfi1b	100	50.729	Anabas_testudineus
ENSSPUG00000016039	GFI1B	100	64.431	ENSAPLG00000003373	GFI1B	100	64.431	Anas_platyrhynchos
ENSSPUG00000016039	GFI1B	99	48.424	ENSACLG00000027053	gfi1b	99	48.424	Astatotilapia_calliptera
ENSSPUG00000016039	GFI1B	100	49.861	ENSAMXG00000037544	GFI1B	100	49.861	Astyanax_mexicanus
ENSSPUG00000016039	GFI1B	100	56.196	ENSCAPG00000010404	GFI1B	100	56.196	Cavia_aperea
ENSSPUG00000016039	GFI1B	100	68.208	ENSCPBG00000021186	GFI1B	100	68.208	Chrysemys_picta_bellii
ENSSPUG00000016039	GFI1B	100	48.851	ENSCSEG00000001315	gfi1b	100	48.851	Cynoglossus_semilaevis
ENSSPUG00000016039	GFI1B	100	49.412	ENSCVAG00000017168	gfi1b	100	49.412	Cyprinodon_variegatus
ENSSPUG00000016039	GFI1B	100	52.023	ENSDARG00000079947	gfi1b	96	62.500	Danio_rerio
ENSSPUG00000016039	GFI1B	100	51.841	ENSELUG00000016933	gfi1b	100	51.841	Esox_lucius
ENSSPUG00000016039	GFI1B	100	59.290	ENSFALG00000001479	GFI1B	100	59.290	Ficedula_albicollis
ENSSPUG00000016039	GFI1B	100	47.953	ENSFHEG00000015138	gfi1b	100	47.953	Fundulus_heteroclitus
ENSSPUG00000016039	GFI1B	81	56.475	ENSGMOG00000019123	gfi1b	99	56.475	Gadus_morhua
ENSSPUG00000016039	GFI1B	100	64.638	ENSGALG00000003478	GFI1B	100	64.638	Gallus_gallus
ENSSPUG00000016039	GFI1B	68	60.944	ENSGAFG00000003059	gfi1b	98	60.944	Gambusia_affinis
ENSSPUG00000016039	GFI1B	100	48.315	ENSGACG00000018134	gfi1b	100	48.315	Gasterosteus_aculeatus
ENSSPUG00000016039	GFI1B	100	68.529	ENSGAGG00000021327	GFI1B	100	68.529	Gopherus_agassizii
ENSSPUG00000016039	GFI1B	99	48.424	ENSHBUG00000005451	gfi1b	99	48.424	Haplochromis_burtoni
ENSSPUG00000016039	GFI1B	100	46.286	ENSHCOG00000013713	gfi1b	100	45.634	Hippocampus_comes
ENSSPUG00000016039	GFI1B	100	51.429	ENSIPUG00000012769	gfi1b	100	51.429	Ictalurus_punctatus
ENSSPUG00000016039	GFI1B	99	55.733	ENSJJAG00000016355	Gfi1b	100	55.733	Jaculus_jaculus
ENSSPUG00000016039	GFI1B	100	50.435	ENSKMAG00000016047	gfi1b	100	50.435	Kryptolebias_marmoratus
ENSSPUG00000016039	GFI1B	100	50.729	ENSLBEG00000020297	gfi1b	99	51.020	Labrus_bergylta
ENSSPUG00000016039	GFI1B	100	53.824	ENSLACG00000012207	GFI1B	100	53.824	Latimeria_chalumnae
ENSSPUG00000016039	GFI1B	100	50.704	ENSLOCG00000005750	gfi1b	100	50.704	Lepisosteus_oculatus
ENSSPUG00000016039	GFI1B	100	60.057	ENSLAFG00000022367	GFI1B	100	60.057	Loxodonta_africana
ENSSPUG00000016039	GFI1B	100	49.854	ENSMAMG00000003040	gfi1b	100	49.854	Mastacembelus_armatus
ENSSPUG00000016039	GFI1B	99	48.424	ENSMZEG00005015594	gfi1b	99	48.424	Maylandia_zebra
ENSSPUG00000016039	GFI1B	100	64.928	ENSMGAG00000006129	GFI1B	100	64.928	Meleagris_gallopavo
ENSSPUG00000016039	GFI1B	100	50.294	ENSMMOG00000011764	gfi1b	100	50.294	Mola_mola
ENSSPUG00000016039	GFI1B	100	55.556	ENSMODG00000012600	GFI1B	100	55.556	Monodelphis_domestica
ENSSPUG00000016039	GFI1B	100	48.397	ENSMALG00000004034	gfi1b	100	48.397	Monopterus_albus
ENSSPUG00000016039	GFI1B	100	59.767	ENSNGAG00000003333	Gfi1b	100	60.174	Nannospalax_galili
ENSSPUG00000016039	GFI1B	99	48.580	ENSNBRG00000012391	gfi1b	99	48.580	Neolamprologus_brichardi
ENSSPUG00000016039	GFI1B	99	49.148	ENSONIG00000013011	gfi1b	99	49.148	Oreochromis_niloticus
ENSSPUG00000016039	GFI1B	100	60.058	ENSOANG00000014723	GFI1B	100	60.058	Ornithorhynchus_anatinus
ENSSPUG00000016039	GFI1B	100	46.628	ENSORLG00000014390	GFI1B	100	46.628	Oryzias_latipes
ENSSPUG00000016039	GFI1B	100	47.522	ENSORLG00020003719	GFI1B	100	47.522	Oryzias_latipes_hni
ENSSPUG00000016039	GFI1B	100	47.076	ENSORLG00015017142	gfi1b	100	47.076	Oryzias_latipes_hsok
ENSSPUG00000016039	GFI1B	100	46.199	ENSOMEG00000015149	GFI1B	100	46.199	Oryzias_melastigma
ENSSPUG00000016039	GFI1B	100	58.453	ENSOGAG00000008879	GFI1B	100	58.841	Otolemur_garnettii
ENSSPUG00000016039	GFI1B	100	52.174	ENSPKIG00000007643	gfi1b	100	52.174	Paramormyrops_kingsleyae
ENSSPUG00000016039	GFI1B	100	68.497	ENSPSIG00000012112	GFI1B	100	68.497	Pelodiscus_sinensis
ENSSPUG00000016039	GFI1B	99	45.797	ENSPMGG00000006021	gfi1b	99	47.522	Periophthalmus_magnuspinnatus
ENSSPUG00000016039	GFI1B	100	55.827	ENSPCIG00000019724	GFI1B	100	55.827	Phascolarctos_cinereus
ENSSPUG00000016039	GFI1B	100	48.844	ENSPFOG00000003460	gfi1b	100	48.844	Poecilia_formosa
ENSSPUG00000016039	GFI1B	100	48.991	ENSPLAG00000021960	GFI1B	100	48.991	Poecilia_latipinna
ENSSPUG00000016039	GFI1B	100	48.563	ENSPLAG00000017181	GFI1B	100	48.563	Poecilia_latipinna
ENSSPUG00000016039	GFI1B	100	48.266	ENSPMEG00000019220	gfi1b	100	48.266	Poecilia_mexicana
ENSSPUG00000016039	GFI1B	100	48.266	ENSPMEG00000001556	GFI1B	100	48.266	Poecilia_mexicana
ENSSPUG00000016039	GFI1B	100	49.128	ENSPREG00000021718	gfi1b	100	49.128	Poecilia_reticulata
ENSSPUG00000016039	GFI1B	83	52.901	ENSPNYG00000018422	gfi1b	91	52.901	Pundamilia_nyererei
ENSSPUG00000016039	GFI1B	100	51.149	ENSPNAG00000021118	gfi1b	100	51.149	Pygocentrus_nattereri
ENSSPUG00000016039	GFI1B	100	47.917	ENSSHAG00000006462	GFI1B	100	47.917	Sarcophilus_harrisii
ENSSPUG00000016039	GFI1B	98	43.813	ENSSFOG00015011566	gfi1b	90	43.813	Scleropages_formosus
ENSSPUG00000016039	GFI1B	100	49.709	ENSSMAG00000015181	gfi1b	99	49.128	Scophthalmus_maximus
ENSSPUG00000016039	GFI1B	100	50.145	ENSSDUG00000011604	gfi1b	100	50.145	Seriola_dumerili
ENSSPUG00000016039	GFI1B	100	50.725	ENSSLDG00000013823	gfi1b	100	50.725	Seriola_lalandi_dorsalis
ENSSPUG00000016039	GFI1B	100	49.128	ENSSPAG00000022914	gfi1b	100	49.128	Stegastes_partitus
ENSSPUG00000016039	GFI1B	85	45.652	ENSTGUG00000015953	-	96	45.652	Taeniopygia_guttata
ENSSPUG00000016039	GFI1B	100	48.159	ENSTRUG00000004525	gfi1b	100	48.159	Takifugu_rubripes
ENSSPUG00000016039	GFI1B	100	49.003	ENSTNIG00000003834	gfi1b	100	49.003	Tetraodon_nigroviridis
ENSSPUG00000016039	GFI1B	100	36.043	ENSTBEG00000014459	GFI1B	100	36.043	Tupaia_belangeri
ENSSPUG00000016039	GFI1B	100	53.561	ENSXETG00000006263	gfi1b	100	53.026	Xenopus_tropicalis
ENSSPUG00000016039	GFI1B	100	48.844	ENSXMAG00000027589	gfi1b	100	48.844	Xiphophorus_maculatus