EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000016330 (Gene tree)
Gene ID: -
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 67010 bases
Position: chrQEPC01011191.1:4580676-4647685
Accession: 17687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000021226	RTC	PF01137.21	3.1e-59	1	1
ENSSPUP00000021226	RTC_insert	PF05189.13	3.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000022634	RCL1-201	2830	-	ENSSPUP00000021226	373 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000016330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000016330's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000016330	RCL1	100	88.204	ENSG00000120158	RCL1	100	90.233	Homo_sapiens
ENSSPUG00000016330	RCL1	99	77.297	ENSAPOG00000015666	rcl1	99	77.297	Acanthochromis_polyacanthus
ENSSPUG00000016330	RCL1	100	88.204	ENSAMEG00000002631	RCL1	100	88.204	Ailuropoda_melanoleuca
ENSSPUG00000016330	RCL1	99	77.297	ENSACIG00000021195	rcl1	99	77.297	Amphilophus_citrinellus
ENSSPUG00000016330	RCL1	99	76.486	ENSAOCG00000002223	rcl1	99	76.486	Amphiprion_ocellaris
ENSSPUG00000016330	RCL1	99	76.486	ENSAPEG00000006905	rcl1	99	76.486	Amphiprion_percula
ENSSPUG00000016330	RCL1	99	73.514	ENSATEG00000020026	rcl1	99	73.514	Anabas_testudineus
ENSSPUG00000016330	RCL1	88	88.110	ENSAPLG00000006031	RCL1	100	88.110	Anas_platyrhynchos
ENSSPUG00000016330	RCL1	100	87.131	ENSACAG00000003640	RCL1	100	87.131	Anolis_carolinensis
ENSSPUG00000016330	RCL1	100	87.668	ENSANAG00000037372	RCL1	100	87.668	Aotus_nancymaae
ENSSPUG00000016330	RCL1	99	76.486	ENSACLG00000021724	rcl1	99	76.486	Astatotilapia_calliptera
ENSSPUG00000016330	RCL1	98	77.717	ENSAMXG00000033394	rcl1	99	77.717	Astyanax_mexicanus
ENSSPUG00000016330	RCL1	99	45.745	WBGene00022852	ZK1127.5	99	45.745	Caenorhabditis_elegans
ENSSPUG00000016330	RCL1	100	87.936	ENSCJAG00000011202	RCL1	100	87.936	Callithrix_jacchus
ENSSPUG00000016330	RCL1	100	88.472	ENSCAFG00000002091	RCL1	100	88.472	Canis_familiaris
ENSSPUG00000016330	RCL1	100	88.740	ENSCAFG00020000638	RCL1	78	88.740	Canis_lupus_dingo
ENSSPUG00000016330	RCL1	100	87.668	ENSCHIG00000012407	RCL1	100	87.668	Capra_hircus
ENSSPUG00000016330	RCL1	88	88.685	ENSTSYG00000009592	RCL1	98	89.130	Carlito_syrichta
ENSSPUG00000016330	RCL1	68	70.520	ENSCAPG00000013575	RCL1	100	70.520	Cavia_aperea
ENSSPUG00000016330	RCL1	100	87.131	ENSCPOG00000015354	RCL1	100	87.131	Cavia_porcellus
ENSSPUG00000016330	RCL1	100	87.936	ENSCCAG00000033505	RCL1	100	87.936	Cebus_capucinus
ENSSPUG00000016330	RCL1	100	87.399	ENSCATG00000034721	RCL1	100	87.399	Cercocebus_atys
ENSSPUG00000016330	RCL1	100	86.863	ENSCLAG00000007445	RCL1	100	86.863	Chinchilla_lanigera
ENSSPUG00000016330	RCL1	100	87.936	ENSCSAG00000008811	RCL1	100	87.936	Chlorocebus_sabaeus
ENSSPUG00000016330	RCL1	87	75.542	ENSCHOG00000007216	RCL1	100	75.542	Choloepus_hoffmanni
ENSSPUG00000016330	RCL1	100	91.957	ENSCPBG00000025481	RCL1	94	91.489	Chrysemys_picta_bellii
ENSSPUG00000016330	RCL1	98	58.649	ENSCING00000019565	-	98	58.649	Ciona_intestinalis
ENSSPUG00000016330	RCL1	100	87.936	ENSCANG00000027099	RCL1	100	87.936	Colobus_angolensis_palliatus
ENSSPUG00000016330	RCL1	100	87.399	ENSCGRG00001013748	Rcl1	100	87.399	Cricetulus_griseus_chok1gshd
ENSSPUG00000016330	RCL1	88	87.500	ENSCGRG00000005843	Rcl1	99	87.500	Cricetulus_griseus_crigri
ENSSPUG00000016330	RCL1	99	77.027	ENSCSEG00000000712	rcl1	97	77.027	Cynoglossus_semilaevis
ENSSPUG00000016330	RCL1	99	77.568	ENSCVAG00000011536	rcl1	99	77.568	Cyprinodon_variegatus
ENSSPUG00000016330	RCL1	98	74.932	ENSDARG00000038312	rcl1	100	74.932	Danio_rerio
ENSSPUG00000016330	RCL1	71	87.925	ENSDNOG00000019911	RCL1	100	88.837	Dasypus_novemcinctus
ENSSPUG00000016330	RCL1	100	87.131	ENSDORG00000015645	Rcl1	100	87.131	Dipodomys_ordii
ENSSPUG00000016330	RCL1	99	52.895	FBgn0020909	Rtc1	99	52.895	Drosophila_melanogaster
ENSSPUG00000016330	RCL1	72	86.957	ENSETEG00000014087	-	82	86.957	Echinops_telfairi
ENSSPUG00000016330	RCL1	98	53.261	ENSEBUG00000016621	-	98	53.261	Eptatretus_burgeri
ENSSPUG00000016330	RCL1	100	87.936	ENSEASG00005010653	RCL1	100	87.936	Equus_asinus_asinus
ENSSPUG00000016330	RCL1	100	87.936	ENSECAG00000015973	RCL1	100	87.936	Equus_caballus
ENSSPUG00000016330	RCL1	100	75.335	ENSEEUG00000009801	RCL1	100	75.335	Erinaceus_europaeus
ENSSPUG00000016330	RCL1	99	74.054	ENSELUG00000007353	rcl1	99	74.054	Esox_lucius
ENSSPUG00000016330	RCL1	100	87.936	ENSFCAG00000014557	RCL1	100	87.936	Felis_catus
ENSSPUG00000016330	RCL1	95	82.254	ENSFALG00000010553	RCL1	94	82.254	Ficedula_albicollis
ENSSPUG00000016330	RCL1	88	86.850	ENSFDAG00000004209	RCL1	100	86.850	Fukomys_damarensis
ENSSPUG00000016330	RCL1	99	77.297	ENSFHEG00000011228	rcl1	99	77.297	Fundulus_heteroclitus
ENSSPUG00000016330	RCL1	99	75.676	ENSGMOG00000004677	rcl1	99	75.676	Gadus_morhua
ENSSPUG00000016330	RCL1	99	86.559	ENSGALG00000015024	RCL1	99	86.559	Gallus_gallus
ENSSPUG00000016330	RCL1	99	75.676	ENSGAFG00000007257	rcl1	99	75.676	Gambusia_affinis
ENSSPUG00000016330	RCL1	99	75.946	ENSGACG00000017474	rcl1	99	75.946	Gasterosteus_aculeatus
ENSSPUG00000016330	RCL1	100	91.421	ENSGAGG00000003689	RCL1	100	91.421	Gopherus_agassizii
ENSSPUG00000016330	RCL1	100	87.668	ENSGGOG00000015041	RCL1	100	87.668	Gorilla_gorilla
ENSSPUG00000016330	RCL1	99	76.757	ENSHBUG00000001393	rcl1	99	76.757	Haplochromis_burtoni
ENSSPUG00000016330	RCL1	100	86.595	ENSHGLG00000016452	RCL1	100	86.595	Heterocephalus_glaber_female
ENSSPUG00000016330	RCL1	100	73.995	ENSHGLG00000005368	-	100	73.995	Heterocephalus_glaber_female
ENSSPUG00000016330	RCL1	100	74.799	ENSHGLG00100018010	-	100	74.799	Heterocephalus_glaber_male
ENSSPUG00000016330	RCL1	100	80.697	ENSHGLG00100008718	-	100	80.697	Heterocephalus_glaber_male
ENSSPUG00000016330	RCL1	99	76.216	ENSHCOG00000020170	rcl1	99	76.216	Hippocampus_comes
ENSSPUG00000016330	RCL1	98	78.261	ENSIPUG00000018054	RCL1	99	78.261	Ictalurus_punctatus
ENSSPUG00000016330	RCL1	100	87.668	ENSSTOG00000000023	RCL1	100	87.668	Ictidomys_tridecemlineatus
ENSSPUG00000016330	RCL1	100	86.863	ENSJJAG00000022803	-	100	86.863	Jaculus_jaculus
ENSSPUG00000016330	RCL1	54	67.164	ENSJJAG00000000764	-	98	67.164	Jaculus_jaculus
ENSSPUG00000016330	RCL1	100	76.408	ENSJJAG00000015632	-	100	76.408	Jaculus_jaculus
ENSSPUG00000016330	RCL1	99	75.405	ENSKMAG00000011946	rcl1	99	75.405	Kryptolebias_marmoratus
ENSSPUG00000016330	RCL1	99	73.514	ENSLBEG00000003957	rcl1	99	73.514	Labrus_bergylta
ENSSPUG00000016330	RCL1	91	78.299	ENSLACG00000004594	RCL1	99	82.188	Latimeria_chalumnae
ENSSPUG00000016330	RCL1	99	81.843	ENSLOCG00000010148	rcl1	98	81.843	Lepisosteus_oculatus
ENSSPUG00000016330	RCL1	100	84.718	ENSLAFG00000017495	RCL1	100	84.718	Loxodonta_africana
ENSSPUG00000016330	RCL1	100	87.936	ENSMFAG00000037906	RCL1	100	87.936	Macaca_fascicularis
ENSSPUG00000016330	RCL1	100	87.936	ENSMNEG00000012288	RCL1	100	87.936	Macaca_nemestrina
ENSSPUG00000016330	RCL1	100	87.936	ENSMLEG00000043088	RCL1	100	87.936	Mandrillus_leucophaeus
ENSSPUG00000016330	RCL1	99	76.757	ENSMAMG00000008311	rcl1	99	76.757	Mastacembelus_armatus
ENSSPUG00000016330	RCL1	99	76.486	ENSMZEG00005017292	rcl1	99	76.486	Maylandia_zebra
ENSSPUG00000016330	RCL1	58	83.562	ENSMGAG00000002245	RCL1	100	83.562	Meleagris_gallopavo
ENSSPUG00000016330	RCL1	58	88.837	ENSMAUG00000008922	Rcl1	100	88.837	Mesocricetus_auratus
ENSSPUG00000016330	RCL1	100	86.595	ENSMICG00000015562	RCL1	100	86.595	Microcebus_murinus
ENSSPUG00000016330	RCL1	100	87.936	ENSMOCG00000012145	Rcl1	100	87.936	Microtus_ochrogaster
ENSSPUG00000016330	RCL1	99	73.315	ENSMMOG00000021264	rcl1	99	73.315	Mola_mola
ENSSPUG00000016330	RCL1	95	87.606	ENSMODG00000015377	RCL1	94	87.606	Monodelphis_domestica
ENSSPUG00000016330	RCL1	99	75.405	ENSMALG00000018618	rcl1	99	75.405	Monopterus_albus
ENSSPUG00000016330	RCL1	100	87.936	MGP_CAROLIEiJ_G0022853	Rcl1	100	87.936	Mus_caroli
ENSSPUG00000016330	RCL1	100	87.936	ENSMUSG00000024785	Rcl1	100	87.936	Mus_musculus
ENSSPUG00000016330	RCL1	100	88.472	MGP_PahariEiJ_G0014346	Rcl1	100	91.176	Mus_pahari
ENSSPUG00000016330	RCL1	100	87.936	MGP_SPRETEiJ_G0023771	Rcl1	100	90.588	Mus_spretus
ENSSPUG00000016330	RCL1	100	87.668	ENSMPUG00000004998	RCL1	100	87.668	Mustela_putorius_furo
ENSSPUG00000016330	RCL1	100	87.936	ENSMLUG00000009654	RCL1	100	87.936	Myotis_lucifugus
ENSSPUG00000016330	RCL1	100	87.668	ENSNGAG00000015327	Rcl1	100	87.668	Nannospalax_galili
ENSSPUG00000016330	RCL1	92	74.927	ENSNBRG00000019854	rcl1	96	72.626	Neolamprologus_brichardi
ENSSPUG00000016330	RCL1	100	85.255	ENSNLEG00000008891	RCL1	100	85.255	Nomascus_leucogenys
ENSSPUG00000016330	RCL1	100	82.306	ENSMEUG00000007653	RCL1	100	82.306	Notamacropus_eugenii
ENSSPUG00000016330	RCL1	100	87.668	ENSOPRG00000010965	RCL1	100	87.668	Ochotona_princeps
ENSSPUG00000016330	RCL1	88	74.085	ENSODEG00000004151	RCL1	96	74.085	Octodon_degus
ENSSPUG00000016330	RCL1	99	76.486	ENSONIG00000003871	rcl1	99	76.486	Oreochromis_niloticus
ENSSPUG00000016330	RCL1	67	84.585	ENSOANG00000013193	-	100	84.585	Ornithorhynchus_anatinus
ENSSPUG00000016330	RCL1	100	88.204	ENSOCUG00000008161	RCL1	100	88.204	Oryctolagus_cuniculus
ENSSPUG00000016330	RCL1	100	74.599	ENSORLG00000010443	rcl1	100	74.599	Oryzias_latipes
ENSSPUG00000016330	RCL1	100	74.599	ENSORLG00020012211	rcl1	100	74.599	Oryzias_latipes_hni
ENSSPUG00000016330	RCL1	100	74.332	ENSORLG00015001122	rcl1	100	74.332	Oryzias_latipes_hsok
ENSSPUG00000016330	RCL1	100	75.668	ENSOMEG00000022976	rcl1	88	75.668	Oryzias_melastigma
ENSSPUG00000016330	RCL1	100	85.791	ENSOGAG00000007480	RCL1	100	85.791	Otolemur_garnettii
ENSSPUG00000016330	RCL1	100	87.936	ENSOARG00000013463	RCL1	100	87.936	Ovis_aries
ENSSPUG00000016330	RCL1	100	88.472	ENSPPAG00000037958	RCL1	100	88.472	Pan_paniscus
ENSSPUG00000016330	RCL1	100	87.131	ENSPPRG00000022645	RCL1	100	87.131	Panthera_pardus
ENSSPUG00000016330	RCL1	87	87.730	ENSPTIG00000019031	RCL1	100	88.372	Panthera_tigris_altaica
ENSSPUG00000016330	RCL1	100	88.204	ENSPTRG00000020743	RCL1	100	88.204	Pan_troglodytes
ENSSPUG00000016330	RCL1	100	87.936	ENSPANG00000025151	RCL1	100	87.936	Papio_anubis
ENSSPUG00000016330	RCL1	99	76.757	ENSPKIG00000021022	rcl1	99	76.757	Paramormyrops_kingsleyae
ENSSPUG00000016330	RCL1	88	91.159	ENSPSIG00000012302	RCL1	100	91.159	Pelodiscus_sinensis
ENSSPUG00000016330	RCL1	99	74.054	ENSPMGG00000024007	rcl1	99	74.054	Periophthalmus_magnuspinnatus
ENSSPUG00000016330	RCL1	100	88.204	ENSPEMG00000023275	Rcl1	100	88.204	Peromyscus_maniculatus_bairdii
ENSSPUG00000016330	RCL1	100	88.204	ENSPCIG00000000188	RCL1	100	88.204	Phascolarctos_cinereus
ENSSPUG00000016330	RCL1	99	76.486	ENSPFOG00000019682	rcl1	99	76.486	Poecilia_formosa
ENSSPUG00000016330	RCL1	99	76.757	ENSPLAG00000022354	rcl1	99	76.757	Poecilia_latipinna
ENSSPUG00000016330	RCL1	99	76.486	ENSPMEG00000008131	rcl1	99	76.486	Poecilia_mexicana
ENSSPUG00000016330	RCL1	99	76.486	ENSPREG00000008032	rcl1	99	76.486	Poecilia_reticulata
ENSSPUG00000016330	RCL1	100	87.936	ENSPPYG00000019244	RCL1	100	87.936	Pongo_abelii
ENSSPUG00000016330	RCL1	100	78.016	ENSPCAG00000001440	RCL1	100	78.016	Procavia_capensis
ENSSPUG00000016330	RCL1	100	87.936	ENSPCOG00000009611	RCL1	100	87.936	Propithecus_coquereli
ENSSPUG00000016330	RCL1	100	88.472	ENSPVAG00000015752	RCL1	100	88.472	Pteropus_vampyrus
ENSSPUG00000016330	RCL1	99	76.486	ENSPNYG00000012910	rcl1	99	76.486	Pundamilia_nyererei
ENSSPUG00000016330	RCL1	98	77.717	ENSPNAG00000028307	rcl1	91	77.717	Pygocentrus_nattereri
ENSSPUG00000016330	RCL1	100	87.131	ENSRNOG00000015491	Rcl1	100	87.131	Rattus_norvegicus
ENSSPUG00000016330	RCL1	100	87.668	ENSRBIG00000035818	RCL1	100	87.668	Rhinopithecus_bieti
ENSSPUG00000016330	RCL1	100	87.936	ENSRROG00000029781	RCL1	100	87.936	Rhinopithecus_roxellana
ENSSPUG00000016330	RCL1	98	35.372	YOL010W	-	97	35.372	Saccharomyces_cerevisiae
ENSSPUG00000016330	RCL1	100	87.668	ENSSBOG00000026369	RCL1	98	89.674	Saimiri_boliviensis_boliviensis
ENSSPUG00000016330	RCL1	88	86.364	ENSSHAG00000014086	RCL1	100	86.364	Sarcophilus_harrisii
ENSSPUG00000016330	RCL1	99	78.919	ENSSFOG00015023020	rcl1	99	78.919	Scleropages_formosus
ENSSPUG00000016330	RCL1	99	75.946	ENSSMAG00000019751	rcl1	85	75.946	Scophthalmus_maximus
ENSSPUG00000016330	RCL1	99	76.486	ENSSDUG00000006349	rcl1	99	76.486	Seriola_dumerili
ENSSPUG00000016330	RCL1	99	76.757	ENSSLDG00000022076	rcl1	99	76.757	Seriola_lalandi_dorsalis
ENSSPUG00000016330	RCL1	100	87.668	ENSSARG00000009260	RCL1	100	87.668	Sorex_araneus
ENSSPUG00000016330	RCL1	99	77.027	ENSSPAG00000018038	rcl1	99	77.027	Stegastes_partitus
ENSSPUG00000016330	RCL1	100	88.740	ENSSSCG00000005217	RCL1	83	88.740	Sus_scrofa
ENSSPUG00000016330	RCL1	100	86.133	ENSTGUG00000005138	RCL1	100	86.133	Taeniopygia_guttata
ENSSPUG00000016330	RCL1	99	74.865	ENSTRUG00000010493	rcl1	99	74.865	Takifugu_rubripes
ENSSPUG00000016330	RCL1	99	74.324	ENSTNIG00000013214	rcl1	99	74.324	Tetraodon_nigroviridis
ENSSPUG00000016330	RCL1	100	83.110	ENSTBEG00000016339	RCL1	100	83.110	Tupaia_belangeri
ENSSPUG00000016330	RCL1	100	87.668	ENSTTRG00000016525	RCL1	100	87.668	Tursiops_truncatus
ENSSPUG00000016330	RCL1	100	88.204	ENSUAMG00000005598	RCL1	100	88.889	Ursus_americanus
ENSSPUG00000016330	RCL1	88	88.073	ENSUMAG00000017890	RCL1	97	88.073	Ursus_maritimus
ENSSPUG00000016330	RCL1	88	89.908	ENSVPAG00000009188	RCL1	100	89.908	Vicugna_pacos
ENSSPUG00000016330	RCL1	88	89.024	ENSVVUG00000007304	RCL1	89	89.024	Vulpes_vulpes
ENSSPUG00000016330	RCL1	100	75.134	ENSXETG00000000592	rcl1	100	75.134	Xenopus_tropicalis
ENSSPUG00000016330	RCL1	99	76.757	ENSXCOG00000004922	rcl1	99	76.757	Xiphophorus_couchianus
ENSSPUG00000016330	RCL1	99	76.757	ENSXMAG00000022366	RCL1	99	76.757	Xiphophorus_maculatus