EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000016339 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 18248 bases
Position: chrQEPC01001726.1:575900-594147
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000021260	TRM13	PF05206.14	2.3e-90	1	1
ENSSPUP00000021260	zf-U11-48K	PF05253.12	3.9e-11	1	1
ENSSPUP00000021260	zf-TRM13_CCCH	PF11722.8	4.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000022668	TRMT13-201	1371	-	ENSSPUP00000021260	456 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000016339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000016339's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000016339	TRMT13	100	67.387	ENSG00000122435	TRMT13	96	67.387	Homo_sapiens
ENSSPUG00000016339	TRMT13	98	48.665	ENSAPOG00000015131	trmt13	98	48.665	Acanthochromis_polyacanthus
ENSSPUG00000016339	TRMT13	100	67.819	ENSAMEG00000008917	TRMT13	96	67.819	Ailuropoda_melanoleuca
ENSSPUG00000016339	TRMT13	98	51.844	ENSACIG00000005804	trmt13	95	50.214	Amphilophus_citrinellus
ENSSPUG00000016339	TRMT13	98	48.073	ENSAOCG00000023585	trmt13	98	48.073	Amphiprion_ocellaris
ENSSPUG00000016339	TRMT13	98	48.073	ENSAPEG00000004025	trmt13	98	48.073	Amphiprion_percula
ENSSPUG00000016339	TRMT13	98	52.061	ENSATEG00000006597	trmt13	95	51.739	Anabas_testudineus
ENSSPUG00000016339	TRMT13	93	71.628	ENSAPLG00000014924	TRMT13	100	71.628	Anas_platyrhynchos
ENSSPUG00000016339	TRMT13	98	72.026	ENSACAG00000003498	TRMT13	97	72.026	Anolis_carolinensis
ENSSPUG00000016339	TRMT13	100	68.035	ENSANAG00000019525	TRMT13	96	68.035	Aotus_nancymaae
ENSSPUG00000016339	TRMT13	99	52.146	ENSACLG00000020018	trmt13	98	52.146	Astatotilapia_calliptera
ENSSPUG00000016339	TRMT13	98	55.000	ENSAMXG00000017963	trmt13	96	55.435	Astyanax_mexicanus
ENSSPUG00000016339	TRMT13	100	67.819	ENSBTAG00000015781	TRMT13	96	67.819	Bos_taurus
ENSSPUG00000016339	TRMT13	100	66.955	ENSCJAG00000000200	TRMT13	90	80.451	Callithrix_jacchus
ENSSPUG00000016339	TRMT13	67	68.506	ENSCAFG00000020021	TRMT13	97	68.506	Canis_familiaris
ENSSPUG00000016339	TRMT13	55	74.409	ENSCAFG00020011572	TRMT13	89	73.828	Canis_lupus_dingo
ENSSPUG00000016339	TRMT13	100	67.819	ENSCHIG00000015395	TRMT13	96	67.819	Capra_hircus
ENSSPUG00000016339	TRMT13	98	64.176	ENSTSYG00000010811	TRMT13	87	75.000	Carlito_syrichta
ENSSPUG00000016339	TRMT13	79	53.168	ENSCAPG00000009085	TRMT13	99	53.994	Cavia_aperea
ENSSPUG00000016339	TRMT13	100	68.182	ENSCPOG00000000694	TRMT13	96	68.182	Cavia_porcellus
ENSSPUG00000016339	TRMT13	100	67.819	ENSCCAG00000023772	TRMT13	96	67.819	Cebus_capucinus
ENSSPUG00000016339	TRMT13	99	68.490	ENSCATG00000033556	TRMT13	95	68.490	Cercocebus_atys
ENSSPUG00000016339	TRMT13	93	64.471	ENSCLAG00000008220	TRMT13	100	65.258	Chinchilla_lanigera
ENSSPUG00000016339	TRMT13	100	67.819	ENSCSAG00000001506	TRMT13	96	67.819	Chlorocebus_sabaeus
ENSSPUG00000016339	TRMT13	100	80.435	ENSCPBG00000026671	TRMT13	96	80.435	Chrysemys_picta_bellii
ENSSPUG00000016339	TRMT13	100	68.035	ENSCANG00000034659	TRMT13	96	68.035	Colobus_angolensis_palliatus
ENSSPUG00000016339	TRMT13	99	66.521	ENSCGRG00001021601	Trmt13	95	66.521	Cricetulus_griseus_chok1gshd
ENSSPUG00000016339	TRMT13	55	62.698	ENSCGRG00000000093	-	97	62.698	Cricetulus_griseus_crigri
ENSSPUG00000016339	TRMT13	98	50.446	ENSCSEG00000000591	trmt13	95	50.446	Cynoglossus_semilaevis
ENSSPUG00000016339	TRMT13	98	50.746	ENSCVAG00000017342	trmt13	92	51.812	Cyprinodon_variegatus
ENSSPUG00000016339	TRMT13	98	57.743	ENSDARG00000102846	trmt13	95	57.743	Danio_rerio
ENSSPUG00000016339	TRMT13	55	72.308	ENSDNOG00000001710	TRMT13	79	72.308	Dasypus_novemcinctus
ENSSPUG00000016339	TRMT13	100	64.795	ENSDORG00000015808	Trmt13	96	64.795	Dipodomys_ordii
ENSSPUG00000016339	TRMT13	99	33.543	FBgn0037435	CG18048	94	33.753	Drosophila_melanogaster
ENSSPUG00000016339	TRMT13	99	59.002	ENSETEG00000005819	TRMT13	95	59.002	Echinops_telfairi
ENSSPUG00000016339	TRMT13	98	48.261	ENSEBUG00000014444	trmt13	96	48.261	Eptatretus_burgeri
ENSSPUG00000016339	TRMT13	100	69.114	ENSEASG00005015918	TRMT13	96	69.114	Equus_asinus_asinus
ENSSPUG00000016339	TRMT13	100	69.114	ENSECAG00000022626	TRMT13	96	69.114	Equus_caballus
ENSSPUG00000016339	TRMT13	75	72.414	ENSEEUG00000000294	TRMT13	73	72.414	Erinaceus_europaeus
ENSSPUG00000016339	TRMT13	98	54.803	ENSELUG00000003803	trmt13	97	55.022	Esox_lucius
ENSSPUG00000016339	TRMT13	100	68.251	ENSFCAG00000030618	TRMT13	96	68.251	Felis_catus
ENSSPUG00000016339	TRMT13	98	73.068	ENSFALG00000002424	TRMT13	95	73.068	Ficedula_albicollis
ENSSPUG00000016339	TRMT13	99	68.490	ENSFDAG00000006342	TRMT13	95	68.490	Fukomys_damarensis
ENSSPUG00000016339	TRMT13	79	54.233	ENSFHEG00000022954	trmt13	97	53.250	Fundulus_heteroclitus
ENSSPUG00000016339	TRMT13	98	49.333	ENSGMOG00000013223	trmt13	99	50.000	Gadus_morhua
ENSSPUG00000016339	TRMT13	99	72.026	ENSGALG00000005290	TRMT13	95	72.284	Gallus_gallus
ENSSPUG00000016339	TRMT13	77	52.316	ENSGAFG00000001577	trmt13	80	52.316	Gambusia_affinis
ENSSPUG00000016339	TRMT13	99	52.928	ENSGACG00000013428	trmt13	97	53.159	Gasterosteus_aculeatus
ENSSPUG00000016339	TRMT13	100	79.610	ENSGAGG00000023303	TRMT13	93	85.938	Gopherus_agassizii
ENSSPUG00000016339	TRMT13	100	67.387	ENSGGOG00000005616	TRMT13	96	67.387	Gorilla_gorilla
ENSSPUG00000016339	TRMT13	99	51.923	ENSHBUG00000007754	trmt13	98	51.923	Haplochromis_burtoni
ENSSPUG00000016339	TRMT13	99	68.709	ENSHGLG00000002164	TRMT13	95	68.709	Heterocephalus_glaber_female
ENSSPUG00000016339	TRMT13	99	68.709	ENSHGLG00100001618	TRMT13	95	68.709	Heterocephalus_glaber_male
ENSSPUG00000016339	TRMT13	99	48.802	ENSHCOG00000020553	trmt13	97	48.802	Hippocampus_comes
ENSSPUG00000016339	TRMT13	98	55.876	ENSIPUG00000024787	trmt13	96	55.679	Ictalurus_punctatus
ENSSPUG00000016339	TRMT13	99	68.709	ENSSTOG00000013483	TRMT13	95	68.709	Ictidomys_tridecemlineatus
ENSSPUG00000016339	TRMT13	99	67.396	ENSJJAG00000018012	Trmt13	96	67.396	Jaculus_jaculus
ENSSPUG00000016339	TRMT13	71	49.383	ENSKMAG00000007639	trmt13	98	49.383	Kryptolebias_marmoratus
ENSSPUG00000016339	TRMT13	99	51.168	ENSLBEG00000020238	trmt13	98	51.288	Labrus_bergylta
ENSSPUG00000016339	TRMT13	99	63.077	ENSLACG00000013153	TRMT13	100	62.563	Latimeria_chalumnae
ENSSPUG00000016339	TRMT13	98	59.471	ENSLOCG00000000418	trmt13	95	59.471	Lepisosteus_oculatus
ENSSPUG00000016339	TRMT13	80	68.392	ENSLAFG00000002383	TRMT13	99	68.392	Loxodonta_africana
ENSSPUG00000016339	TRMT13	100	67.819	ENSMFAG00000034681	TRMT13	96	67.819	Macaca_fascicularis
ENSSPUG00000016339	TRMT13	100	67.819	ENSMMUG00000004243	TRMT13	96	67.819	Macaca_mulatta
ENSSPUG00000016339	TRMT13	100	67.819	ENSMNEG00000036102	TRMT13	96	67.819	Macaca_nemestrina
ENSSPUG00000016339	TRMT13	99	68.709	ENSMLEG00000034258	TRMT13	95	68.709	Mandrillus_leucophaeus
ENSSPUG00000016339	TRMT13	98	52.183	ENSMAMG00000016597	trmt13	95	52.183	Mastacembelus_armatus
ENSSPUG00000016339	TRMT13	99	51.931	ENSMZEG00005020959	trmt13	98	51.931	Maylandia_zebra
ENSSPUG00000016339	TRMT13	93	73.349	ENSMGAG00000006970	TRMT13	99	73.349	Meleagris_gallopavo
ENSSPUG00000016339	TRMT13	99	66.812	ENSMAUG00000010448	Trmt13	95	66.812	Mesocricetus_auratus
ENSSPUG00000016339	TRMT13	100	68.251	ENSMICG00000005283	TRMT13	96	68.251	Microcebus_murinus
ENSSPUG00000016339	TRMT13	99	66.302	ENSMOCG00000019914	Trmt13	95	66.302	Microtus_ochrogaster
ENSSPUG00000016339	TRMT13	55	49.804	ENSMMOG00000007762	trmt13	87	49.804	Mola_mola
ENSSPUG00000016339	TRMT13	100	66.524	ENSMODG00000003646	TRMT13	96	66.524	Monodelphis_domestica
ENSSPUG00000016339	TRMT13	99	52.097	ENSMALG00000020965	trmt13	96	52.097	Monopterus_albus
ENSSPUG00000016339	TRMT13	99	68.053	MGP_CAROLIEiJ_G0025568	Trmt13	94	70.238	Mus_caroli
ENSSPUG00000016339	TRMT13	99	67.982	ENSMUSG00000033439	Trmt13	94	71.429	Mus_musculus
ENSSPUG00000016339	TRMT13	99	67.325	MGP_PahariEiJ_G0027014	Trmt13	93	71.084	Mus_pahari
ENSSPUG00000016339	TRMT13	99	67.982	MGP_SPRETEiJ_G0026518	Trmt13	94	71.429	Mus_spretus
ENSSPUG00000016339	TRMT13	83	65.699	ENSMPUG00000002078	-	99	65.699	Mustela_putorius_furo
ENSSPUG00000016339	TRMT13	100	62.771	ENSMLUG00000002124	TRMT13	96	62.771	Myotis_lucifugus
ENSSPUG00000016339	TRMT13	99	47.732	ENSNBRG00000006783	trmt13	95	48.268	Neolamprologus_brichardi
ENSSPUG00000016339	TRMT13	100	66.955	ENSNLEG00000035917	TRMT13	96	66.955	Nomascus_leucogenys
ENSSPUG00000016339	TRMT13	64	72.727	ENSOPRG00000012048	TRMT13	62	72.727	Ochotona_princeps
ENSSPUG00000016339	TRMT13	99	51.592	ENSONIG00000004574	trmt13	98	51.592	Oreochromis_niloticus
ENSSPUG00000016339	TRMT13	93	69.697	ENSOANG00000012057	TRMT13	99	69.697	Ornithorhynchus_anatinus
ENSSPUG00000016339	TRMT13	99	67.763	ENSOCUG00000023095	TRMT13	95	67.763	Oryctolagus_cuniculus
ENSSPUG00000016339	TRMT13	99	49.241	ENSORLG00000003320	trmt13	97	49.672	Oryzias_latipes
ENSSPUG00000016339	TRMT13	98	49.669	ENSORLG00020005972	trmt13	96	49.333	Oryzias_latipes_hni
ENSSPUG00000016339	TRMT13	99	52.052	ENSORLG00015002270	trmt13	97	52.916	Oryzias_latipes_hsok
ENSSPUG00000016339	TRMT13	99	51.828	ENSOMEG00000006724	trmt13	93	53.233	Oryzias_melastigma
ENSSPUG00000016339	TRMT13	98	68.352	ENSOGAG00000005618	TRMT13	92	68.490	Otolemur_garnettii
ENSSPUG00000016339	TRMT13	100	67.819	ENSOARG00000017983	TRMT13	96	67.819	Ovis_aries
ENSSPUG00000016339	TRMT13	100	67.171	ENSPPAG00000043736	TRMT13	96	67.171	Pan_paniscus
ENSSPUG00000016339	TRMT13	100	68.251	ENSPPRG00000003424	TRMT13	96	68.251	Panthera_pardus
ENSSPUG00000016339	TRMT13	100	68.251	ENSPTIG00000018598	TRMT13	96	68.251	Panthera_tigris_altaica
ENSSPUG00000016339	TRMT13	100	66.955	ENSPTRG00000001001	TRMT13	96	66.955	Pan_troglodytes
ENSSPUG00000016339	TRMT13	100	68.035	ENSPANG00000007598	TRMT13	96	68.035	Papio_anubis
ENSSPUG00000016339	TRMT13	99	54.626	ENSPKIG00000001514	trmt13	97	54.626	Paramormyrops_kingsleyae
ENSSPUG00000016339	TRMT13	90	78.502	ENSPSIG00000012703	TRMT13	99	78.502	Pelodiscus_sinensis
ENSSPUG00000016339	TRMT13	98	52.863	ENSPMGG00000013298	trmt13	92	52.863	Periophthalmus_magnuspinnatus
ENSSPUG00000016339	TRMT13	99	66.521	ENSPEMG00000000275	Trmt13	95	66.521	Peromyscus_maniculatus_bairdii
ENSSPUG00000016339	TRMT13	97	46.089	ENSPMAG00000000823	trmt13	96	46.089	Petromyzon_marinus
ENSSPUG00000016339	TRMT13	100	67.666	ENSPCIG00000007699	TRMT13	97	68.094	Phascolarctos_cinereus
ENSSPUG00000016339	TRMT13	99	50.549	ENSPFOG00000008675	trmt13	95	50.549	Poecilia_formosa
ENSSPUG00000016339	TRMT13	98	49.676	ENSPLAG00000009709	trmt13	98	49.676	Poecilia_latipinna
ENSSPUG00000016339	TRMT13	98	49.892	ENSPMEG00000022954	trmt13	98	49.892	Poecilia_mexicana
ENSSPUG00000016339	TRMT13	77	52.861	ENSPREG00000005645	trmt13	90	53.309	Poecilia_reticulata
ENSSPUG00000016339	TRMT13	100	67.171	ENSPPYG00000001120	TRMT13	96	67.171	Pongo_abelii
ENSSPUG00000016339	TRMT13	99	68.053	ENSPCAG00000002340	TRMT13	95	68.053	Procavia_capensis
ENSSPUG00000016339	TRMT13	100	67.603	ENSPCOG00000017984	TRMT13	96	67.603	Propithecus_coquereli
ENSSPUG00000016339	TRMT13	99	68.777	ENSPVAG00000017430	TRMT13	95	68.777	Pteropus_vampyrus
ENSSPUG00000016339	TRMT13	99	50.000	ENSPNYG00000013690	trmt13	98	50.000	Pundamilia_nyererei
ENSSPUG00000016339	TRMT13	98	57.205	ENSPNAG00000022130	trmt13	96	57.205	Pygocentrus_nattereri
ENSSPUG00000016339	TRMT13	99	67.105	ENSRNOG00000015140	Trmt13	92	67.105	Rattus_norvegicus
ENSSPUG00000016339	TRMT13	100	68.035	ENSRBIG00000037686	TRMT13	96	68.035	Rhinopithecus_bieti
ENSSPUG00000016339	TRMT13	100	68.035	ENSRROG00000044057	TRMT13	96	68.035	Rhinopithecus_roxellana
ENSSPUG00000016339	TRMT13	100	67.603	ENSSBOG00000026541	TRMT13	96	67.603	Saimiri_boliviensis_boliviensis
ENSSPUG00000016339	TRMT13	94	68.750	ENSSHAG00000005213	TRMT13	96	68.750	Sarcophilus_harrisii
ENSSPUG00000016339	TRMT13	99	54.286	ENSSFOG00015017560	trmt13	96	54.286	Scleropages_formosus
ENSSPUG00000016339	TRMT13	98	52.061	ENSSMAG00000014592	trmt13	94	52.061	Scophthalmus_maximus
ENSSPUG00000016339	TRMT13	98	50.533	ENSSDUG00000015508	trmt13	96	50.418	Seriola_dumerili
ENSSPUG00000016339	TRMT13	98	50.426	ENSSLDG00000019060	trmt13	95	50.426	Seriola_lalandi_dorsalis
ENSSPUG00000016339	TRMT13	99	61.926	ENSSARG00000010344	TRMT13	96	61.926	Sorex_araneus
ENSSPUG00000016339	TRMT13	98	51.844	ENSSPAG00000011922	trmt13	97	51.828	Stegastes_partitus
ENSSPUG00000016339	TRMT13	100	67.603	ENSSSCG00000006869	TRMT13	96	67.603	Sus_scrofa
ENSSPUG00000016339	TRMT13	98	71.619	ENSTGUG00000005253	TRMT13	97	71.619	Taeniopygia_guttata
ENSSPUG00000016339	TRMT13	97	51.404	ENSTRUG00000008400	trmt13	98	51.168	Takifugu_rubripes
ENSSPUG00000016339	TRMT13	91	54.808	ENSTBEG00000008911	TRMT13	100	54.808	Tupaia_belangeri
ENSSPUG00000016339	TRMT13	51	79.710	ENSTTRG00000015302	-	58	79.710	Tursiops_truncatus
ENSSPUG00000016339	TRMT13	100	65.659	ENSUAMG00000017251	TRMT13	96	65.659	Ursus_americanus
ENSSPUG00000016339	TRMT13	100	68.035	ENSUMAG00000007901	TRMT13	99	68.056	Ursus_maritimus
ENSSPUG00000016339	TRMT13	93	55.869	ENSVPAG00000001034	TRMT13	99	55.869	Vicugna_pacos
ENSSPUG00000016339	TRMT13	98	68.421	ENSVVUG00000021996	TRMT13	95	68.421	Vulpes_vulpes
ENSSPUG00000016339	TRMT13	98	57.018	ENSXETG00000013204	trmt13	95	57.018	Xenopus_tropicalis
ENSSPUG00000016339	TRMT13	98	48.812	ENSXMAG00000010765	trmt13	98	48.812	Xiphophorus_maculatus