EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000016347 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 19478 bases
Position: chrQEPC01006697.1:1068688-1088165
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000021273	MMR_HSR1	PF01926.23	3.4e-15	1	1
ENSSPUP00000021259	MMR_HSR1	PF01926.23	4.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000022681	LSG1-202	1835	-	ENSSPUP00000021273	596 (aa)	-	-
ENSSPUT00000022667	LSG1-201	2012	-	ENSSPUP00000021259	655 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000016347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000016347's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000016347	LSG1	99	73.770	ENSG00000041802	LSG1	98	75.568	Homo_sapiens
ENSSPUG00000016347	LSG1	100	65.857	ENSAPOG00000009694	lsg1	100	66.009	Acanthochromis_polyacanthus
ENSSPUG00000016347	LSG1	100	67.756	ENSAMEG00000009343	LSG1	100	67.905	Ailuropoda_melanoleuca
ENSSPUG00000016347	LSG1	98	64.915	ENSACIG00000012406	lsg1	100	65.053	Amphilophus_citrinellus
ENSSPUG00000016347	LSG1	100	65.303	ENSAOCG00000016066	lsg1	100	66.009	Amphiprion_ocellaris
ENSSPUG00000016347	LSG1	100	65.455	ENSAPEG00000003252	lsg1	100	65.706	Amphiprion_percula
ENSSPUG00000016347	LSG1	98	65.319	ENSATEG00000011794	lsg1	100	65.449	Anabas_testudineus
ENSSPUG00000016347	LSG1	95	65.934	ENSACAG00000004222	LSG1	100	66.041	Anolis_carolinensis
ENSSPUG00000016347	LSG1	99	67.313	ENSANAG00000021153	LSG1	99	67.713	Aotus_nancymaae
ENSSPUG00000016347	LSG1	100	66.063	ENSACLG00000000520	lsg1	100	66.063	Astatotilapia_calliptera
ENSSPUG00000016347	LSG1	100	65.250	ENSAMXG00000008271	lsg1	100	65.512	Astyanax_mexicanus
ENSSPUG00000016347	LSG1	99	66.718	ENSBTAG00000008461	LSG1	99	66.967	Bos_taurus
ENSSPUG00000016347	LSG1	71	53.591	WBGene00016907	C53H9.2	88	58.871	Caenorhabditis_elegans
ENSSPUG00000016347	LSG1	99	66.317	ENSCJAG00000013962	LSG1	99	66.916	Callithrix_jacchus
ENSSPUG00000016347	LSG1	95	67.615	ENSCAFG00000013445	LSG1	100	68.088	Canis_familiaris
ENSSPUG00000016347	LSG1	100	66.119	ENSCAFG00020002216	LSG1	99	67.670	Canis_lupus_dingo
ENSSPUG00000016347	LSG1	100	67.825	ENSCHIG00000015769	LSG1	100	67.879	Capra_hircus
ENSSPUG00000016347	LSG1	99	67.013	ENSTSYG00000001447	LSG1	99	67.459	Carlito_syrichta
ENSSPUG00000016347	LSG1	95	66.667	ENSCAPG00000009856	LSG1	99	67.143	Cavia_aperea
ENSSPUG00000016347	LSG1	99	66.717	ENSCCAG00000035744	LSG1	99	66.966	Cebus_capucinus
ENSSPUG00000016347	LSG1	99	68.257	ENSCATG00000042060	LSG1	99	66.366	Cercocebus_atys
ENSSPUG00000016347	LSG1	99	67.016	ENSCSAG00000008796	LSG1	92	67.417	Chlorocebus_sabaeus
ENSSPUG00000016347	LSG1	100	72.714	ENSCPBG00000015941	LSG1	83	73.763	Chrysemys_picta_bellii
ENSSPUG00000016347	LSG1	75	62.011	ENSCING00000007079	-	97	62.304	Ciona_intestinalis
ENSSPUG00000016347	LSG1	76	59.474	ENSCSAVG00000002514	-	92	60.204	Ciona_savignyi
ENSSPUG00000016347	LSG1	99	66.667	ENSCANG00000030709	LSG1	99	67.068	Colobus_angolensis_palliatus
ENSSPUG00000016347	LSG1	99	67.275	ENSCGRG00001019846	Lsg1	99	67.781	Cricetulus_griseus_chok1gshd
ENSSPUG00000016347	LSG1	99	66.867	ENSCGRG00000014617	Lsg1	99	67.665	Cricetulus_griseus_crigri
ENSSPUG00000016347	LSG1	98	63.166	ENSCSEG00000008522	lsg1	100	63.338	Cynoglossus_semilaevis
ENSSPUG00000016347	LSG1	97	65.625	ENSCVAG00000002484	lsg1	100	66.667	Cyprinodon_variegatus
ENSSPUG00000016347	LSG1	100	66.717	ENSDARG00000015352	lsg1	100	66.465	Danio_rerio
ENSSPUG00000016347	LSG1	99	67.064	ENSDNOG00000006224	LSG1	99	67.064	Dasypus_novemcinctus
ENSSPUG00000016347	LSG1	83	58.848	FBgn0266284	Ns3	99	46.951	Drosophila_melanogaster
ENSSPUG00000016347	LSG1	88	72.368	ENSETEG00000003888	LSG1	89	72.368	Echinops_telfairi
ENSSPUG00000016347	LSG1	87	58.577	ENSEBUG00000003119	lsg1	85	55.721	Eptatretus_burgeri
ENSSPUG00000016347	LSG1	99	68.358	ENSEASG00005000678	LSG1	99	68.806	Equus_asinus_asinus
ENSSPUG00000016347	LSG1	99	68.507	ENSECAG00000017659	LSG1	99	68.955	Equus_caballus
ENSSPUG00000016347	LSG1	87	63.559	ENSEEUG00000015217	LSG1	87	63.559	Erinaceus_europaeus
ENSSPUG00000016347	LSG1	100	64.599	ENSELUG00000023973	lsg1	100	64.706	Esox_lucius
ENSSPUG00000016347	LSG1	100	68.263	ENSFCAG00000024957	LSG1	100	68.413	Felis_catus
ENSSPUG00000016347	LSG1	96	67.702	ENSFALG00000007210	LSG1	97	68.944	Ficedula_albicollis
ENSSPUG00000016347	LSG1	99	66.159	ENSFDAG00000017373	LSG1	99	67.580	Fukomys_damarensis
ENSSPUG00000016347	LSG1	97	64.130	ENSFHEG00000003680	lsg1	100	64.590	Fundulus_heteroclitus
ENSSPUG00000016347	LSG1	98	61.705	ENSGMOG00000015834	lsg1	100	61.912	Gadus_morhua
ENSSPUG00000016347	LSG1	99	66.216	ENSGALG00000007058	LSG1	87	68.018	Gallus_gallus
ENSSPUG00000016347	LSG1	97	64.375	ENSGAFG00000015831	lsg1	100	64.536	Gambusia_affinis
ENSSPUG00000016347	LSG1	98	63.957	ENSGACG00000009323	lsg1	100	63.964	Gasterosteus_aculeatus
ENSSPUG00000016347	LSG1	99	75.410	ENSGGOG00000000520	LSG1	91	75.410	Gorilla_gorilla
ENSSPUG00000016347	LSG1	100	66.465	ENSHBUG00000005659	lsg1	100	66.465	Haplochromis_burtoni
ENSSPUG00000016347	LSG1	99	65.106	ENSHGLG00000017390	LSG1	99	66.163	Heterocephalus_glaber_female
ENSSPUG00000016347	LSG1	99	64.804	ENSHGLG00100018587	LSG1	99	65.861	Heterocephalus_glaber_male
ENSSPUG00000016347	LSG1	97	64.375	ENSHCOG00000016848	lsg1	100	64.384	Hippocampus_comes
ENSSPUG00000016347	LSG1	100	64.885	ENSIPUG00000008631	lsg1	100	64.885	Ictalurus_punctatus
ENSSPUG00000016347	LSG1	76	62.402	ENSSTOG00000010234	LSG1	92	63.922	Ictidomys_tridecemlineatus
ENSSPUG00000016347	LSG1	99	67.879	ENSJJAG00000015513	Lsg1	99	68.541	Jaculus_jaculus
ENSSPUG00000016347	LSG1	98	64.451	ENSKMAG00000009681	lsg1	100	64.750	Kryptolebias_marmoratus
ENSSPUG00000016347	LSG1	98	63.551	ENSLBEG00000024261	lsg1	100	64.024	Labrus_bergylta
ENSSPUG00000016347	LSG1	100	67.766	ENSLACG00000013399	LSG1	100	68.601	Latimeria_chalumnae
ENSSPUG00000016347	LSG1	98	65.606	ENSLOCG00000004918	lsg1	100	66.069	Lepisosteus_oculatus
ENSSPUG00000016347	LSG1	99	67.372	ENSLAFG00000012919	-	99	67.674	Loxodonta_africana
ENSSPUG00000016347	LSG1	99	67.016	ENSMFAG00000039903	LSG1	99	66.066	Macaca_fascicularis
ENSSPUG00000016347	LSG1	99	67.016	ENSMMUG00000010708	LSG1	99	67.417	Macaca_mulatta
ENSSPUG00000016347	LSG1	99	67.016	ENSMNEG00000031538	LSG1	99	65.916	Macaca_nemestrina
ENSSPUG00000016347	LSG1	99	67.016	ENSMLEG00000041184	LSG1	99	67.417	Mandrillus_leucophaeus
ENSSPUG00000016347	LSG1	100	63.374	ENSMAMG00000000470	lsg1	100	63.374	Mastacembelus_armatus
ENSSPUG00000016347	LSG1	100	66.465	ENSMZEG00005017865	lsg1	100	66.465	Maylandia_zebra
ENSSPUG00000016347	LSG1	88	68.855	ENSMGAG00000007050	LSG1	99	70.389	Meleagris_gallopavo
ENSSPUG00000016347	LSG1	95	64.115	ENSMAUG00000016976	Lsg1	96	64.184	Mesocricetus_auratus
ENSSPUG00000016347	LSG1	99	65.967	ENSMICG00000049087	LSG1	99	66.467	Microcebus_murinus
ENSSPUG00000016347	LSG1	99	66.517	ENSMOCG00000022136	Lsg1	99	67.015	Microtus_ochrogaster
ENSSPUG00000016347	LSG1	83	73.333	ENSMMOG00000008884	lsg1	100	62.137	Mola_mola
ENSSPUG00000016347	LSG1	98	57.589	ENSMODG00000019828	LSG1	99	57.589	Monodelphis_domestica
ENSSPUG00000016347	LSG1	100	69.184	MGP_CAROLIEiJ_G0020648	Lsg1	100	69.834	Mus_caroli
ENSSPUG00000016347	LSG1	100	68.929	ENSMUSG00000022538	Lsg1	100	69.532	Mus_musculus
ENSSPUG00000016347	LSG1	98	68.043	MGP_PahariEiJ_G0016352	Lsg1	100	68.872	Mus_pahari
ENSSPUG00000016347	LSG1	100	68.986	MGP_SPRETEiJ_G0021544	Lsg1	100	69.592	Mus_spretus
ENSSPUG00000016347	LSG1	100	67.504	ENSMPUG00000003734	LSG1	100	67.756	Mustela_putorius_furo
ENSSPUG00000016347	LSG1	100	68.358	ENSMLUG00000012548	LSG1	100	68.657	Myotis_lucifugus
ENSSPUG00000016347	LSG1	99	65.291	ENSNGAG00000021872	Lsg1	99	65.022	Nannospalax_galili
ENSSPUG00000016347	LSG1	99	67.463	ENSNLEG00000008293	LSG1	99	67.411	Nomascus_leucogenys
ENSSPUG00000016347	LSG1	67	74.227	ENSMEUG00000009041	-	84	74.227	Notamacropus_eugenii
ENSSPUG00000016347	LSG1	100	66.768	ENSONIG00000002635	lsg1	100	66.667	Oreochromis_niloticus
ENSSPUG00000016347	LSG1	95	70.189	ENSOANG00000012742	LSG1	99	70.189	Ornithorhynchus_anatinus
ENSSPUG00000016347	LSG1	99	66.667	ENSOCUG00000004817	LSG1	99	68.053	Oryctolagus_cuniculus
ENSSPUG00000016347	LSG1	98	63.820	ENSORLG00000007695	lsg1	100	64.448	Oryzias_latipes
ENSSPUG00000016347	LSG1	98	64.031	ENSORLG00020016286	lsg1	100	64.438	Oryzias_latipes_hni
ENSSPUG00000016347	LSG1	98	63.975	ENSORLG00015012025	lsg1	100	64.590	Oryzias_latipes_hsok
ENSSPUG00000016347	LSG1	98	62.305	ENSOMEG00000022379	lsg1	100	63.014	Oryzias_melastigma
ENSSPUG00000016347	LSG1	99	66.766	ENSOGAG00000003475	LSG1	99	67.362	Otolemur_garnettii
ENSSPUG00000016347	LSG1	100	67.474	ENSOARG00000020403	LSG1	100	67.365	Ovis_aries
ENSSPUG00000016347	LSG1	99	77.049	ENSPPAG00000029271	LSG1	91	77.049	Pan_paniscus
ENSSPUG00000016347	LSG1	100	67.160	ENSPPRG00000010281	LSG1	100	67.308	Panthera_pardus
ENSSPUG00000016347	LSG1	100	68.012	ENSPTIG00000010789	LSG1	100	68.161	Panthera_tigris_altaica
ENSSPUG00000016347	LSG1	99	77.049	ENSPTRG00000015760	LSG1	91	77.049	Pan_troglodytes
ENSSPUG00000016347	LSG1	99	67.166	ENSPANG00000018249	LSG1	99	66.216	Papio_anubis
ENSSPUG00000016347	LSG1	99	64.340	ENSPKIG00000002895	lsg1	99	64.947	Paramormyrops_kingsleyae
ENSSPUG00000016347	LSG1	96	69.077	ENSPSIG00000009821	LSG1	99	69.077	Pelodiscus_sinensis
ENSSPUG00000016347	LSG1	95	65.120	ENSPMGG00000000931	lsg1	100	65.120	Periophthalmus_magnuspinnatus
ENSSPUG00000016347	LSG1	99	67.608	ENSPEMG00000012082	-	99	67.608	Peromyscus_maniculatus_bairdii
ENSSPUG00000016347	LSG1	99	60.320	ENSPMAG00000007451	lsg1	99	60.320	Petromyzon_marinus
ENSSPUG00000016347	LSG1	100	65.803	ENSPCIG00000013890	LSG1	82	65.803	Phascolarctos_cinereus
ENSSPUG00000016347	LSG1	97	65.367	ENSPFOG00000021882	lsg1	100	65.653	Poecilia_formosa
ENSSPUG00000016347	LSG1	97	64.743	ENSPLAG00000019536	lsg1	100	65.046	Poecilia_latipinna
ENSSPUG00000016347	LSG1	97	64.541	ENSPMEG00000017281	lsg1	100	64.848	Poecilia_mexicana
ENSSPUG00000016347	LSG1	97	56.375	ENSPREG00000006048	lsg1	100	57.186	Poecilia_reticulata
ENSSPUG00000016347	LSG1	92	65.691	ENSPPYG00000014425	LSG1	100	65.691	Pongo_abelii
ENSSPUG00000016347	LSG1	90	71.053	ENSPCAG00000005511	LSG1	90	71.053	Procavia_capensis
ENSSPUG00000016347	LSG1	99	66.119	ENSPCOG00000012360	LSG1	99	66.617	Propithecus_coquereli
ENSSPUG00000016347	LSG1	100	66.063	ENSPNYG00000021994	lsg1	100	66.063	Pundamilia_nyererei
ENSSPUG00000016347	LSG1	100	66.061	ENSPNAG00000015533	lsg1	100	66.061	Pygocentrus_nattereri
ENSSPUG00000016347	LSG1	100	66.518	ENSRNOG00000001727	Lsg1	100	68.398	Rattus_norvegicus
ENSSPUG00000016347	LSG1	99	66.517	ENSRBIG00000029053	LSG1	99	66.916	Rhinopithecus_bieti
ENSSPUG00000016347	LSG1	99	66.517	ENSRROG00000037702	LSG1	99	66.916	Rhinopithecus_roxellana
ENSSPUG00000016347	LSG1	69	56.688	YGL099W	LSG1	69	57.647	Saccharomyces_cerevisiae
ENSSPUG00000016347	LSG1	99	67.766	ENSSBOG00000034938	LSG1	99	68.168	Saimiri_boliviensis_boliviensis
ENSSPUG00000016347	LSG1	78	65.169	ENSSHAG00000003487	LSG1	100	65.169	Sarcophilus_harrisii
ENSSPUG00000016347	LSG1	98	65.785	ENSSFOG00015008955	lsg1	100	65.753	Scleropages_formosus
ENSSPUG00000016347	LSG1	98	65.798	ENSSDUG00000004622	lsg1	100	66.066	Seriola_dumerili
ENSSPUG00000016347	LSG1	98	64.551	ENSSLDG00000010869	lsg1	100	65.000	Seriola_lalandi_dorsalis
ENSSPUG00000016347	LSG1	80	69.388	ENSSARG00000012981	LSG1	84	67.956	Sorex_araneus
ENSSPUG00000016347	LSG1	100	65.350	ENSSPAG00000005508	lsg1	100	65.961	Stegastes_partitus
ENSSPUG00000016347	LSG1	100	74.194	ENSSSCG00000011827	LSG1	100	66.163	Sus_scrofa
ENSSPUG00000016347	LSG1	89	67.715	ENSTGUG00000009068	LSG1	100	69.000	Taeniopygia_guttata
ENSSPUG00000016347	LSG1	97	60.815	ENSTRUG00000017380	lsg1	100	61.374	Takifugu_rubripes
ENSSPUG00000016347	LSG1	97	63.963	ENSTNIG00000015570	lsg1	100	65.053	Tetraodon_nigroviridis
ENSSPUG00000016347	LSG1	100	76.667	ENSTTRG00000000559	LSG1	91	76.667	Tursiops_truncatus
ENSSPUG00000016347	LSG1	100	75.806	ENSUAMG00000012454	LSG1	100	67.905	Ursus_americanus
ENSSPUG00000016347	LSG1	100	75.806	ENSUMAG00000000855	LSG1	100	67.905	Ursus_maritimus
ENSSPUG00000016347	LSG1	95	65.258	ENSVPAG00000012400	LSG1	100	65.258	Vicugna_pacos
ENSSPUG00000016347	LSG1	95	66.719	ENSVVUG00000008956	LSG1	99	65.766	Vulpes_vulpes
ENSSPUG00000016347	LSG1	100	66.566	ENSXETG00000003451	lsg1	100	67.620	Xenopus_tropicalis
ENSSPUG00000016347	LSG1	97	63.281	ENSXCOG00000003239	lsg1	100	63.623	Xiphophorus_couchianus
ENSSPUG00000016347	LSG1	97	63.914	ENSXMAG00000005536	lsg1	100	64.382	Xiphophorus_maculatus