EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000016470 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 15572 bases
Position: chrQEPC01009510.1:1307610-1323181
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000021527	eIF-3c_N	PF05470.12	3.1e-257	1	1
ENSSPUP00000021538	eIF-3c_N	PF05470.12	6e-257	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000022944	-	3309	-	ENSSPUP00000021527	911 (aa)	-	-
ENSSPUT00000022957	-	2613	-	ENSSPUP00000021538	870 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000016470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000016470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000016470	-	100	84.590	ENSG00000184110	EIF3C	100	97.468	Homo_sapiens
ENSSPUG00000016470	-	100	83.734	ENSG00000205609	EIF3CL	100	83.734	Homo_sapiens
ENSSPUG00000016470	-	100	75.133	ENSAPOG00000024092	eif3c	94	84.286	Acanthochromis_polyacanthus
ENSSPUG00000016470	-	100	85.137	ENSAMEG00000015454	-	100	84.044	Ailuropoda_melanoleuca
ENSSPUG00000016470	-	100	74.261	ENSACIG00000015082	eif3c	88	84.375	Amphilophus_citrinellus
ENSSPUG00000016470	-	100	75.803	ENSAOCG00000021466	eif3c	94	85.149	Amphiprion_ocellaris
ENSSPUG00000016470	-	100	75.803	ENSAPEG00000010521	eif3c	94	85.149	Amphiprion_percula
ENSSPUG00000016470	-	100	75.803	ENSATEG00000019001	eif3c	100	76.017	Anabas_testudineus
ENSSPUG00000016470	-	100	92.662	ENSACAG00000005937	-	100	92.114	Anolis_carolinensis
ENSSPUG00000016470	-	100	84.590	ENSANAG00000020640	-	100	83.716	Aotus_nancymaae
ENSSPUG00000016470	-	88	83.470	ENSACLG00000009347	eif3c	90	83.855	Astatotilapia_calliptera
ENSSPUG00000016470	-	88	81.392	ENSACLG00000009322	eif3c	92	81.422	Astatotilapia_calliptera
ENSSPUG00000016470	-	99	76.484	ENSAMXG00000020949	eif3c	99	76.022	Astyanax_mexicanus
ENSSPUG00000016470	-	100	84.573	ENSBTAG00000006543	EIF3CL	100	84.792	Bos_taurus
ENSSPUG00000016470	-	99	44.092	WBGene00001226	eif-3.C	93	43.771	Caenorhabditis_elegans
ENSSPUG00000016470	-	100	84.699	ENSCJAG00000006341	-	100	83.825	Callithrix_jacchus
ENSSPUG00000016470	-	100	85.027	ENSCAFG00000017143	-	100	83.716	Canis_familiaris
ENSSPUG00000016470	-	100	85.027	ENSCAFG00020017587	-	100	83.934	Canis_lupus_dingo
ENSSPUG00000016470	-	100	84.683	ENSCHIG00000024795	-	100	84.902	Capra_hircus
ENSSPUG00000016470	-	100	84.590	ENSTSYG00000003486	-	100	83.497	Carlito_syrichta
ENSSPUG00000016470	-	96	76.723	ENSCAPG00000015887	-	100	75.819	Cavia_aperea
ENSSPUG00000016470	-	100	85.027	ENSCPOG00000007533	-	100	84.044	Cavia_porcellus
ENSSPUG00000016470	-	100	79.891	ENSCCAG00000027724	-	100	78.251	Cebus_capucinus
ENSSPUG00000016470	-	100	84.136	ENSCCAG00000034928	-	100	83.899	Cebus_capucinus
ENSSPUG00000016470	-	99	72.841	ENSCCAG00000029099	-	98	71.476	Cebus_capucinus
ENSSPUG00000016470	-	100	84.590	ENSCATG00000032673	-	100	83.716	Cercocebus_atys
ENSSPUG00000016470	-	100	84.699	ENSCLAG00000011094	-	100	83.825	Chinchilla_lanigera
ENSSPUG00000016470	-	100	84.590	ENSCSAG00000006297	-	100	83.716	Chlorocebus_sabaeus
ENSSPUG00000016470	-	55	71.042	ENSCHOG00000003120	-	85	71.042	Choloepus_hoffmanni
ENSSPUG00000016470	-	72	91.743	ENSCPBG00000012407	-	92	88.820	Chrysemys_picta_bellii
ENSSPUG00000016470	-	92	51.625	ENSCSAVG00000006744	-	99	56.261	Ciona_savignyi
ENSSPUG00000016470	-	100	84.590	ENSCANG00000033626	-	100	83.716	Colobus_angolensis_palliatus
ENSSPUG00000016470	-	100	84.153	ENSCGRG00001015265	EIF3C	100	83.716	Cricetulus_griseus_chok1gshd
ENSSPUG00000016470	-	100	75.602	ENSCSEG00000017770	eif3c	100	75.492	Cynoglossus_semilaevis
ENSSPUG00000016470	-	100	75.884	ENSCVAG00000005402	eif3c	95	81.153	Cyprinodon_variegatus
ENSSPUG00000016470	-	100	76.022	ENSDARG00000016443	eif3c	100	75.699	Danio_rerio
ENSSPUG00000016470	-	100	85.027	ENSDNOG00000031497	-	100	84.044	Dasypus_novemcinctus
ENSSPUG00000016470	-	100	84.699	ENSDORG00000016471	Eif3c	100	83.716	Dipodomys_ordii
ENSSPUG00000016470	-	98	52.667	FBgn0034258	eIF3c	99	50.959	Drosophila_melanogaster
ENSSPUG00000016470	-	92	94.064	ENSETEG00000013527	-	92	94.064	Echinops_telfairi
ENSSPUG00000016470	-	99	63.734	ENSEBUG00000001629	eif3c	99	63.802	Eptatretus_burgeri
ENSSPUG00000016470	-	100	85.027	ENSECAG00000008746	-	100	83.934	Equus_caballus
ENSSPUG00000016470	-	87	83.104	ENSEEUG00000006148	-	100	82.478	Erinaceus_europaeus
ENSSPUG00000016470	-	65	59.370	ENSEEUG00000000726	-	64	59.083	Erinaceus_europaeus
ENSSPUG00000016470	-	99	76.554	ENSELUG00000022257	eif3c	93	84.528	Esox_lucius
ENSSPUG00000016470	-	100	84.809	ENSFCAG00000015782	-	100	83.716	Felis_catus
ENSSPUG00000016470	-	100	84.699	ENSFDAG00000003588	-	100	83.716	Fukomys_damarensis
ENSSPUG00000016470	-	100	76.496	ENSFHEG00000014154	EIF3C	95	84.320	Fundulus_heteroclitus
ENSSPUG00000016470	-	97	76.490	ENSGMOG00000016885	eif3c	99	76.603	Gadus_morhua
ENSSPUG00000016470	-	96	76.705	ENSGACG00000007652	eif3c	100	75.983	Gasterosteus_aculeatus
ENSSPUG00000016470	-	92	87.070	ENSGAGG00000006666	-	100	87.544	Gopherus_agassizii
ENSSPUG00000016470	-	99	82.766	ENSGGOG00000026919	EIF3C	100	83.655	Gorilla_gorilla
ENSSPUG00000016470	-	53	82.239	ENSGGOG00000022677	-	91	83.425	Gorilla_gorilla
ENSSPUG00000016470	-	100	84.809	ENSHGLG00000011445	EIF3C	100	83.825	Heterocephalus_glaber_female
ENSSPUG00000016470	-	100	84.809	ENSHGLG00100000217	EIF3C	100	83.825	Heterocephalus_glaber_male
ENSSPUG00000016470	-	100	74.758	ENSHCOG00000019694	eif3c	100	74.651	Hippocampus_comes
ENSSPUG00000016470	-	100	74.732	ENSIPUG00000016878	eif3c	100	75.936	Ictalurus_punctatus
ENSSPUG00000016470	-	100	84.699	ENSSTOG00000021278	-	100	83.825	Ictidomys_tridecemlineatus
ENSSPUG00000016470	-	100	84.590	ENSJJAG00000012722	Eif3c	100	83.607	Jaculus_jaculus
ENSSPUG00000016470	-	98	77.212	ENSKMAG00000021662	eif3c	99	74.180	Kryptolebias_marmoratus
ENSSPUG00000016470	-	98	76.418	ENSLBEG00000023370	eif3c	100	74.707	Labrus_bergylta
ENSSPUG00000016470	-	98	82.589	ENSLACG00000000770	eif3c	99	81.967	Latimeria_chalumnae
ENSSPUG00000016470	-	100	84.481	ENSLAFG00000027426	-	100	83.388	Loxodonta_africana
ENSSPUG00000016470	-	100	84.590	ENSMFAG00000041930	-	100	83.716	Macaca_fascicularis
ENSSPUG00000016470	-	100	84.590	ENSMMUG00000011798	-	100	83.716	Macaca_mulatta
ENSSPUG00000016470	-	100	84.590	ENSMNEG00000023915	-	100	83.716	Macaca_nemestrina
ENSSPUG00000016470	-	100	84.590	ENSMLEG00000027529	-	100	83.716	Mandrillus_leucophaeus
ENSSPUG00000016470	-	100	76.017	ENSMAMG00000012512	eif3c	99	81.947	Mastacembelus_armatus
ENSSPUG00000016470	-	88	83.470	ENSMZEG00005013699	eif3c	90	83.797	Maylandia_zebra
ENSSPUG00000016470	-	88	81.553	ENSMZEG00005013685	eif3c	92	81.583	Maylandia_zebra
ENSSPUG00000016470	-	100	84.044	ENSMAUG00000010621	Eif3c	100	83.388	Mesocricetus_auratus
ENSSPUG00000016470	-	100	85.246	ENSMICG00000036748	-	100	84.153	Microcebus_murinus
ENSSPUG00000016470	-	100	82.404	ENSMOCG00000004204	Eif3c	100	81.749	Microtus_ochrogaster
ENSSPUG00000016470	-	99	74.512	ENSMMOG00000001572	eif3c	99	83.663	Mola_mola
ENSSPUG00000016470	-	100	85.120	ENSMODG00000015579	-	100	84.354	Monodelphis_domestica
ENSSPUG00000016470	-	99	75.169	ENSMALG00000008907	eif3c	95	83.784	Monopterus_albus
ENSSPUG00000016470	-	100	83.917	MGP_CAROLIEiJ_G0030451	Eif3c	100	83.807	Mus_caroli
ENSSPUG00000016470	-	100	83.917	ENSMUSG00000030738	Eif3c	100	83.807	Mus_musculus
ENSSPUG00000016470	-	100	83.479	MGP_PahariEiJ_G0013661	Eif3c	100	83.698	Mus_pahari
ENSSPUG00000016470	-	100	83.917	MGP_SPRETEiJ_G0031565	Eif3c	100	83.807	Mus_spretus
ENSSPUG00000016470	-	96	85.034	ENSMPUG00000012732	-	100	83.900	Mustela_putorius_furo
ENSSPUG00000016470	-	100	84.699	ENSMLUG00000015558	-	100	83.716	Myotis_lucifugus
ENSSPUG00000016470	-	100	84.699	ENSNGAG00000007177	-	100	83.716	Nannospalax_galili
ENSSPUG00000016470	-	92	78.182	ENSNGAG00000010901	-	98	78.182	Nannospalax_galili
ENSSPUG00000016470	-	99	75.897	ENSNLEG00000001425	-	91	85.000	Nomascus_leucogenys
ENSSPUG00000016470	-	100	70.601	ENSMEUG00000009939	-	99	69.037	Notamacropus_eugenii
ENSSPUG00000016470	-	85	70.400	ENSMEUG00000005317	-	96	70.435	Notamacropus_eugenii
ENSSPUG00000016470	-	100	84.044	ENSOPRG00000000931	-	100	83.388	Ochotona_princeps
ENSSPUG00000016470	-	100	84.481	ENSODEG00000013508	-	100	83.825	Octodon_degus
ENSSPUG00000016470	-	69	61.463	ENSONIG00000011434	eif3c	100	61.789	Oreochromis_niloticus
ENSSPUG00000016470	-	100	82.239	ENSOANG00000011410	-	100	81.485	Ornithorhynchus_anatinus
ENSSPUG00000016470	-	100	84.918	ENSOCUG00000022489	-	100	83.934	Oryctolagus_cuniculus
ENSSPUG00000016470	-	97	77.203	ENSORLG00000006318	eif3c	98	76.968	Oryzias_latipes
ENSSPUG00000016470	-	98	75.920	ENSORLG00020015713	eif3c	98	78.267	Oryzias_latipes_hni
ENSSPUG00000016470	-	98	75.920	ENSORLG00015013772	eif3c	100	74.786	Oryzias_latipes_hsok
ENSSPUG00000016470	-	100	74.865	ENSOMEG00000020450	eif3c	100	74.865	Oryzias_melastigma
ENSSPUG00000016470	-	100	84.934	ENSOGAG00000012737	-	100	83.843	Otolemur_garnettii
ENSSPUG00000016470	-	100	84.683	ENSOARG00000002892	-	100	84.902	Ovis_aries
ENSSPUG00000016470	-	100	84.809	ENSPPRG00000012336	-	100	83.716	Panthera_pardus
ENSSPUG00000016470	-	100	84.809	ENSPTIG00000011712	-	100	83.716	Panthera_tigris_altaica
ENSSPUG00000016470	-	100	84.590	ENSPANG00000021151	-	100	83.716	Papio_anubis
ENSSPUG00000016470	-	100	76.180	ENSPKIG00000002049	eif3c	100	75.751	Paramormyrops_kingsleyae
ENSSPUG00000016470	-	90	85.099	ENSPMGG00000005409	eif3c	99	81.493	Periophthalmus_magnuspinnatus
ENSSPUG00000016470	-	100	83.807	ENSPEMG00000010899	Eif3c	100	83.917	Peromyscus_maniculatus_bairdii
ENSSPUG00000016470	-	100	85.120	ENSPCIG00000025206	-	100	84.354	Phascolarctos_cinereus
ENSSPUG00000016470	-	100	75.615	ENSPFOG00000004476	eif3c	100	75.294	Poecilia_formosa
ENSSPUG00000016470	-	99	75.429	ENSPLAG00000017480	eif3c	96	82.092	Poecilia_latipinna
ENSSPUG00000016470	-	100	75.910	ENSPMEG00000019512	eif3c	95	83.495	Poecilia_mexicana
ENSSPUG00000016470	-	99	76.229	ENSPREG00000023139	eif3c	100	75.142	Poecilia_reticulata
ENSSPUG00000016470	-	100	82.186	ENSPPYG00000007227	-	100	81.421	Pongo_abelii
ENSSPUG00000016470	-	69	88.040	ENSPCAG00000012710	-	100	88.538	Procavia_capensis
ENSSPUG00000016470	-	100	85.027	ENSPCOG00000019289	-	100	83.934	Propithecus_coquereli
ENSSPUG00000016470	-	100	84.590	ENSPVAG00000005804	-	100	83.497	Pteropus_vampyrus
ENSSPUG00000016470	-	66	67.722	ENSPNYG00000016530	eif3c	84	77.966	Pundamilia_nyererei
ENSSPUG00000016470	-	100	76.134	ENSPNAG00000024040	eif3c	91	86.949	Pygocentrus_nattereri
ENSSPUG00000016470	-	100	83.698	ENSRNOG00000018761	Eif3c	100	83.917	Rattus_norvegicus
ENSSPUG00000016470	-	97	84.502	ENSRBIG00000044009	-	98	81.940	Rhinopithecus_bieti
ENSSPUG00000016470	-	100	84.590	ENSRROG00000043626	-	100	83.716	Rhinopithecus_roxellana
ENSSPUG00000016470	-	74	30.726	YMR309C	-	79	30.645	Saccharomyces_cerevisiae
ENSSPUG00000016470	-	100	84.716	ENSSBOG00000032155	-	100	83.843	Saimiri_boliviensis_boliviensis
ENSSPUG00000016470	-	96	85.164	ENSSHAG00000011808	-	100	84.371	Sarcophilus_harrisii
ENSSPUG00000016470	-	99	76.591	ENSSFOG00015021823	eif3c	99	75.536	Scleropages_formosus
ENSSPUG00000016470	-	97	77.565	ENSSMAG00000016638	eif3c	97	77.252	Scophthalmus_maximus
ENSSPUG00000016470	-	97	80.702	ENSSDUG00000023117	eif3c	100	77.361	Seriola_dumerili
ENSSPUG00000016470	-	100	75.426	ENSSLDG00000009706	eif3c	95	83.943	Seriola_lalandi_dorsalis
ENSSPUG00000016470	-	100	76.605	ENSSPAG00000000426	eif3c	100	76.797	Stegastes_partitus
ENSSPUG00000016470	-	100	84.372	ENSSSCG00000034927	-	100	83.607	Sus_scrofa
ENSSPUG00000016470	-	99	74.596	ENSTRUG00000008951	eif3c	99	75.054	Takifugu_rubripes
ENSSPUG00000016470	-	100	74.946	ENSTNIG00000015210	eif3c	100	75.054	Tetraodon_nigroviridis
ENSSPUG00000016470	-	100	85.355	ENSTTRG00000005880	-	100	84.262	Tursiops_truncatus
ENSSPUG00000016470	-	74	87.270	ENSUAMG00000001127	-	91	95.223	Ursus_americanus
ENSSPUG00000016470	-	100	85.137	ENSUMAG00000010927	-	100	84.044	Ursus_maritimus
ENSSPUG00000016470	-	100	83.716	ENSVVUG00000025970	-	100	82.623	Vulpes_vulpes
ENSSPUG00000016470	-	100	80.303	ENSXETG00000002941	eif3c	100	80.844	Xenopus_tropicalis
ENSSPUG00000016470	-	100	76.515	ENSXMAG00000013796	eif3c	100	76.082	Xiphophorus_maculatus