EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000016497 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 167526 bases
Position: chrQEPC01012389.1:2021205-2188730
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000021470	ResIII	PF04851.15	7.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000022886	-	2655	-	ENSSPUP00000021470	884 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000016497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000016497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000016497	-	56	32.037	ENSSPUG00000004633	SMARCAD1	84	32.015
ENSSPUG00000016497	-	60	33.333	ENSSPUG00000005866	ERCC6L	50	33.391
ENSSPUG00000016497	-	56	32.290	ENSSPUG00000016865	CHD1L	51	32.290

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000016497	-	82	73.901	ENSG00000265817	FSBP	100	73.901	Homo_sapiens
ENSSPUG00000016497	-	99	68.709	ENSG00000197275	RAD54B	100	68.709	Homo_sapiens
ENSSPUG00000016497	-	99	67.908	ENSAMEG00000005834	-	99	67.908	Ailuropoda_melanoleuca
ENSSPUG00000016497	-	99	57.912	ENSACIG00000013005	rad54b	99	57.912	Amphilophus_citrinellus
ENSSPUG00000016497	-	99	57.342	ENSAOCG00000008523	rad54b	99	57.449	Amphiprion_ocellaris
ENSSPUG00000016497	-	99	58.501	ENSAPEG00000001673	rad54b	99	58.501	Amphiprion_percula
ENSSPUG00000016497	-	99	57.430	ENSATEG00000001527	rad54b	99	57.430	Anabas_testudineus
ENSSPUG00000016497	-	100	77.283	ENSAPLG00000014366	-	100	77.283	Anas_platyrhynchos
ENSSPUG00000016497	-	90	77.541	ENSACAG00000003671	-	99	77.541	Anolis_carolinensis
ENSSPUG00000016497	-	73	74.114	ENSANAG00000019528	-	100	74.114	Aotus_nancymaae
ENSSPUG00000016497	-	99	57.960	ENSACLG00000007826	rad54b	99	57.960	Astatotilapia_calliptera
ENSSPUG00000016497	-	88	59.596	ENSAMXG00000039985	rad54b	94	59.199	Astyanax_mexicanus
ENSSPUG00000016497	-	99	67.432	ENSBTAG00000000632	RAD54B	99	67.432	Bos_taurus
ENSSPUG00000016497	-	82	34.933	WBGene00013792	Y116A8C.13	96	33.098	Caenorhabditis_elegans
ENSSPUG00000016497	-	99	68.122	ENSCJAG00000000080	-	100	73.352	Callithrix_jacchus
ENSSPUG00000016497	-	99	66.813	ENSCAFG00000009179	RAD54B	99	66.813	Canis_familiaris
ENSSPUG00000016497	-	99	66.813	ENSCAFG00020012084	-	99	66.813	Canis_lupus_dingo
ENSSPUG00000016497	-	99	67.541	ENSCHIG00000008230	-	99	67.541	Capra_hircus
ENSSPUG00000016497	-	99	68.202	ENSTSYG00000013234	-	99	68.202	Carlito_syrichta
ENSSPUG00000016497	-	100	68.882	ENSCPOG00000011643	-	100	68.882	Cavia_porcellus
ENSSPUG00000016497	-	99	68.122	ENSCCAG00000011754	-	100	73.388	Cebus_capucinus
ENSSPUG00000016497	-	99	68.381	ENSCATG00000030661	-	100	73.489	Cercocebus_atys
ENSSPUG00000016497	-	99	69.843	ENSCLAG00000010476	-	100	69.843	Chinchilla_lanigera
ENSSPUG00000016497	-	99	68.271	ENSCSAG00000012712	-	100	68.271	Chlorocebus_sabaeus
ENSSPUG00000016497	-	99	81.650	ENSCPBG00000003204	-	100	81.330	Chrysemys_picta_bellii
ENSSPUG00000016497	-	99	68.381	ENSCANG00000017939	-	100	73.764	Colobus_angolensis_palliatus
ENSSPUG00000016497	-	99	66.403	ENSCGRG00001020184	Rad54b	99	66.403	Cricetulus_griseus_chok1gshd
ENSSPUG00000016497	-	99	65.506	ENSCGRG00000016752	Rad54b	99	65.506	Cricetulus_griseus_crigri
ENSSPUG00000016497	-	99	56.854	ENSCSEG00000001601	rad54b	99	56.854	Cynoglossus_semilaevis
ENSSPUG00000016497	-	99	59.755	ENSCVAG00000009200	rad54b	99	59.755	Cyprinodon_variegatus
ENSSPUG00000016497	-	99	55.889	ENSDARG00000092134	rad54b	99	61.290	Danio_rerio
ENSSPUG00000016497	-	99	68.197	ENSDNOG00000015535	-	99	68.197	Dasypus_novemcinctus
ENSSPUG00000016497	-	99	69.379	ENSDORG00000002492	Rad54b	99	69.379	Dipodomys_ordii
ENSSPUG00000016497	-	86	68.909	ENSETEG00000010605	-	100	68.909	Echinops_telfairi
ENSSPUG00000016497	-	99	46.609	ENSEBUG00000009104	rad54b	98	46.609	Eptatretus_burgeri
ENSSPUG00000016497	-	96	65.576	ENSEASG00005004021	-	99	65.576	Equus_asinus_asinus
ENSSPUG00000016497	-	99	65.683	ENSECAG00000021949	-	99	65.683	Equus_caballus
ENSSPUG00000016497	-	79	71.069	ENSEEUG00000008056	-	77	71.069	Erinaceus_europaeus
ENSSPUG00000016497	-	99	54.216	ENSELUG00000009287	rad54b	99	54.216	Esox_lucius
ENSSPUG00000016497	-	99	67.689	ENSFCAG00000015513	-	99	73.140	Felis_catus
ENSSPUG00000016497	-	99	76.066	ENSFALG00000005467	-	99	76.066	Ficedula_albicollis
ENSSPUG00000016497	-	99	67.873	ENSFDAG00000020541	-	100	67.873	Fukomys_damarensis
ENSSPUG00000016497	-	91	60.024	ENSFHEG00000014382	rad54b	89	60.024	Fundulus_heteroclitus
ENSSPUG00000016497	-	88	60.100	ENSGMOG00000014774	rad54b	98	60.100	Gadus_morhua
ENSSPUG00000016497	-	100	75.435	ENSGALG00000043597	RAD54B	100	75.435	Gallus_gallus
ENSSPUG00000016497	-	100	58.501	ENSGAFG00000007901	rad54b	99	58.501	Gambusia_affinis
ENSSPUG00000016497	-	99	56.681	ENSGACG00000009128	rad54b	100	56.681	Gasterosteus_aculeatus
ENSSPUG00000016497	-	99	80.999	ENSGAGG00000018747	-	99	80.999	Gopherus_agassizii
ENSSPUG00000016497	-	99	68.860	ENSGGOG00000023516	-	99	68.860	Gorilla_gorilla
ENSSPUG00000016497	-	99	56.043	ENSHBUG00000016017	rad54b	99	56.043	Haplochromis_burtoni
ENSSPUG00000016497	-	99	66.594	ENSHGLG00000008263	RAD54B	99	66.812	Heterocephalus_glaber_female
ENSSPUG00000016497	-	99	65.946	ENSHGLG00100008108	-	99	66.162	Heterocephalus_glaber_male
ENSSPUG00000016497	-	99	56.119	ENSHCOG00000004764	rad54b	100	56.119	Hippocampus_comes
ENSSPUG00000016497	-	99	53.628	ENSIPUG00000018531	rad54b	99	53.628	Ictalurus_punctatus
ENSSPUG00000016497	-	99	65.639	ENSSTOG00000010791	-	99	65.639	Ictidomys_tridecemlineatus
ENSSPUG00000016497	-	99	66.703	ENSJJAG00000010314	Rad54b	99	66.703	Jaculus_jaculus
ENSSPUG00000016497	-	99	57.795	ENSKMAG00000004744	rad54b	99	57.795	Kryptolebias_marmoratus
ENSSPUG00000016497	-	84	71.716	ENSLACG00000000859	-	100	71.716	Latimeria_chalumnae
ENSSPUG00000016497	-	99	59.465	ENSLOCG00000010100	rad54b	94	65.370	Lepisosteus_oculatus
ENSSPUG00000016497	-	90	71.734	ENSLAFG00000015315	-	98	71.734	Loxodonta_africana
ENSSPUG00000016497	-	99	68.490	ENSMFAG00000031629	-	100	73.626	Macaca_fascicularis
ENSSPUG00000016497	-	99	68.490	ENSMMUG00000005659	-	100	68.490	Macaca_mulatta
ENSSPUG00000016497	-	99	68.346	ENSMNEG00000016408	-	100	68.346	Macaca_nemestrina
ENSSPUG00000016497	-	99	68.381	ENSMLEG00000006946	-	100	68.381	Mandrillus_leucophaeus
ENSSPUG00000016497	-	99	58.333	ENSMAMG00000012269	rad54b	99	58.333	Mastacembelus_armatus
ENSSPUG00000016497	-	99	56.150	ENSMZEG00005005281	rad54b	96	61.070	Maylandia_zebra
ENSSPUG00000016497	-	100	75.272	ENSMGAG00000012024	-	100	75.272	Meleagris_gallopavo
ENSSPUG00000016497	-	99	66.442	ENSMAUG00000013586	Rad54b	99	66.442	Mesocricetus_auratus
ENSSPUG00000016497	-	99	68.274	ENSMICG00000000754	-	99	68.274	Microcebus_murinus
ENSSPUG00000016497	-	100	65.552	ENSMOCG00000020035	Rad54b	100	65.552	Microtus_ochrogaster
ENSSPUG00000016497	-	99	57.031	ENSMMOG00000003394	rad54b	99	57.031	Mola_mola
ENSSPUG00000016497	-	91	74.037	ENSMODG00000007343	-	99	74.037	Monodelphis_domestica
ENSSPUG00000016497	-	72	61.801	ENSMALG00000001520	rad54b	99	61.705	Monopterus_albus
ENSSPUG00000016497	-	99	66.368	MGP_CAROLIEiJ_G0025810	Rad54b	99	66.368	Mus_caroli
ENSSPUG00000016497	-	99	65.919	ENSMUSG00000078773	Rad54b	99	65.919	Mus_musculus
ENSSPUG00000016497	-	99	65.919	MGP_PahariEiJ_G0023933	Rad54b	99	65.919	Mus_pahari
ENSSPUG00000016497	-	99	66.741	MGP_SPRETEiJ_G0026758	Rad54b	99	66.741	Mus_spretus
ENSSPUG00000016497	-	91	71.891	ENSMPUG00000008878	-	99	71.891	Mustela_putorius_furo
ENSSPUG00000016497	-	99	67.434	ENSMLUG00000008953	-	99	67.434	Myotis_lucifugus
ENSSPUG00000016497	-	99	66.924	ENSNGAG00000017537	Rad54b	99	66.924	Nannospalax_galili
ENSSPUG00000016497	-	99	58.072	ENSNBRG00000013394	rad54b	99	58.072	Neolamprologus_brichardi
ENSSPUG00000016497	-	100	68.559	ENSNLEG00000003062	-	100	73.937	Nomascus_leucogenys
ENSSPUG00000016497	-	72	70.960	ENSMEUG00000012426	-	70	70.960	Notamacropus_eugenii
ENSSPUG00000016497	-	99	67.991	ENSODEG00000019564	-	99	67.991	Octodon_degus
ENSSPUG00000016497	-	91	67.244	ENSODEG00000002650	-	96	72.994	Octodon_degus
ENSSPUG00000016497	-	99	56.880	ENSONIG00000006067	rad54b	99	56.880	Oreochromis_niloticus
ENSSPUG00000016497	-	85	76.064	ENSOANG00000011348	-	99	76.064	Ornithorhynchus_anatinus
ENSSPUG00000016497	-	99	67.360	ENSOCUG00000016478	-	99	67.360	Oryctolagus_cuniculus
ENSSPUG00000016497	-	99	56.416	ENSORLG00000008918	rad54b	99	63.524	Oryzias_latipes
ENSSPUG00000016497	-	73	63.369	ENSORLG00020012171	rad54b	99	63.369	Oryzias_latipes_hni
ENSSPUG00000016497	-	99	55.824	ENSORLG00015018536	rad54b	99	55.824	Oryzias_latipes_hsok
ENSSPUG00000016497	-	87	62.148	ENSOMEG00000004345	rad54b	99	62.148	Oryzias_melastigma
ENSSPUG00000016497	-	99	66.411	ENSOGAG00000007854	-	99	66.411	Otolemur_garnettii
ENSSPUG00000016497	-	91	71.995	ENSOARG00000007691	-	99	71.995	Ovis_aries
ENSSPUG00000016497	-	99	67.287	ENSPPAG00000029572	-	100	67.287	Pan_paniscus
ENSSPUG00000016497	-	99	67.798	ENSPPRG00000007571	-	99	73.140	Panthera_pardus
ENSSPUG00000016497	-	82	73.278	ENSPTIG00000012670	-	99	73.278	Panthera_tigris_altaica
ENSSPUG00000016497	-	99	68.600	ENSPTRG00000020427	-	100	73.764	Pan_troglodytes
ENSSPUG00000016497	-	99	68.490	ENSPANG00000019566	-	100	68.490	Papio_anubis
ENSSPUG00000016497	-	99	60.022	ENSPKIG00000014974	rad54b	99	60.022	Paramormyrops_kingsleyae
ENSSPUG00000016497	-	99	78.176	ENSPSIG00000002383	-	99	81.730	Pelodiscus_sinensis
ENSSPUG00000016497	-	99	66.330	ENSPEMG00000012133	Rad54b	99	66.330	Peromyscus_maniculatus_bairdii
ENSSPUG00000016497	-	88	59.292	ENSPMAG00000002916	rad54b	98	59.292	Petromyzon_marinus
ENSSPUG00000016497	-	95	71.260	ENSPCIG00000020151	-	97	71.260	Phascolarctos_cinereus
ENSSPUG00000016497	-	100	57.037	ENSPFOG00000023411	rad54b	99	57.037	Poecilia_formosa
ENSSPUG00000016497	-	100	57.249	ENSPLAG00000010430	rad54b	99	57.249	Poecilia_latipinna
ENSSPUG00000016497	-	100	58.231	ENSPMEG00000016873	rad54b	99	58.231	Poecilia_mexicana
ENSSPUG00000016497	-	100	59.060	ENSPREG00000018443	rad54b	99	59.060	Poecilia_reticulata
ENSSPUG00000016497	-	99	68.709	ENSPPYG00000018750	-	100	68.709	Pongo_abelii
ENSSPUG00000016497	-	99	67.908	ENSPCOG00000026845	-	99	73.829	Propithecus_coquereli
ENSSPUG00000016497	-	84	71.871	ENSPVAG00000000261	-	86	71.871	Pteropus_vampyrus
ENSSPUG00000016497	-	89	60.625	ENSPNYG00000018303	rad54b	97	60.625	Pundamilia_nyererei
ENSSPUG00000016497	-	99	56.040	ENSPNAG00000000295	rad54b	99	56.040	Pygocentrus_nattereri
ENSSPUG00000016497	-	99	65.657	ENSRNOG00000039949	Rad54b	99	65.657	Rattus_norvegicus
ENSSPUG00000016497	-	99	67.943	ENSRBIG00000020419	-	100	67.943	Rhinopithecus_bieti
ENSSPUG00000016497	-	99	67.834	ENSRROG00000039897	-	100	67.834	Rhinopithecus_roxellana
ENSSPUG00000016497	-	88	35.281	YBR073W	RDH54	88	35.480	Saccharomyces_cerevisiae
ENSSPUG00000016497	-	99	68.122	ENSSBOG00000028501	-	100	68.122	Saimiri_boliviensis_boliviensis
ENSSPUG00000016497	-	99	69.071	ENSSHAG00000017038	-	100	69.071	Sarcophilus_harrisii
ENSSPUG00000016497	-	68	65.391	ENSSFOG00015008483	rad54b	93	65.391	Scleropages_formosus
ENSSPUG00000016497	-	99	58.184	ENSSMAG00000018659	rad54b	99	58.212	Scophthalmus_maximus
ENSSPUG00000016497	-	92	62.259	ENSSDUG00000001122	rad54b	86	62.259	Seriola_dumerili
ENSSPUG00000016497	-	95	61.290	ENSSLDG00000013787	rad54b	99	55.879	Seriola_lalandi_dorsalis
ENSSPUG00000016497	-	99	58.751	ENSSPAG00000012800	rad54b	99	58.751	Stegastes_partitus
ENSSPUG00000016497	-	99	67.517	ENSSSCG00000006101	-	99	72.125	Sus_scrofa
ENSSPUG00000016497	-	99	75.027	ENSTGUG00000011880	-	100	75.027	Taeniopygia_guttata
ENSSPUG00000016497	-	99	55.143	ENSTRUG00000010015	rad54b	99	55.249	Takifugu_rubripes
ENSSPUG00000016497	-	99	63.268	ENSTTRG00000006312	-	99	63.268	Tursiops_truncatus
ENSSPUG00000016497	-	99	68.018	ENSUMAG00000016401	-	99	68.018	Ursus_maritimus
ENSSPUG00000016497	-	99	66.630	ENSVPAG00000003157	-	99	66.630	Vicugna_pacos
ENSSPUG00000016497	-	99	56.969	ENSXETG00000025924	rad54b	99	59.530	Xenopus_tropicalis
ENSSPUG00000016497	-	100	58.343	ENSXMAG00000013141	rad54b	99	58.343	Xiphophorus_maculatus