EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000016701 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 6721 bases
Position: chrQEPC01003117.1:3898873-3905593
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000021767	RRM_1	PF00076.22	9e-11	1	1
ENSSPUP00000021755	RRM_1	PF00076.22	9.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000023193	-	909	-	ENSSPUP00000021767	302 (aa)	-	-
ENSSPUT00000023181	-	1792	-	ENSSPUP00000021755	302 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000016701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000016701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000016701	-	55	56.140	ENSSPUG00000010400	-	67	36.364
ENSSPUG00000016701	-	77	34.468	ENSSPUG00000010415	-	99	34.322

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000016701	-	82	46.903	ENSAPOG00000010086	trnau1apb	66	35.887	Acanthochromis_polyacanthus
ENSSPUG00000016701	-	90	33.453	ENSACIG00000001863	trnau1apb	69	33.333	Amphilophus_citrinellus
ENSSPUG00000016701	-	82	36.400	ENSAOCG00000011891	trnau1apb	71	34.884	Amphiprion_ocellaris
ENSSPUG00000016701	-	82	35.887	ENSATEG00000002196	trnau1apb	71	35.659	Anabas_testudineus
ENSSPUG00000016701	-	90	34.050	ENSACLG00000003016	trnau1apb	69	33.725	Astatotilapia_calliptera
ENSSPUG00000016701	-	82	35.573	ENSAMXG00000001805	trnau1apb	68	36.293	Astyanax_mexicanus
ENSSPUG00000016701	-	82	34.677	ENSCVAG00000017866	trnau1apb	74	36.782	Cyprinodon_variegatus
ENSSPUG00000016701	-	82	36.863	ENSDARG00000056475	trnau1apb	67	38.911	Danio_rerio
ENSSPUG00000016701	-	82	55.814	ENSFHEG00000001267	trnau1apb	75	35.294	Fundulus_heteroclitus
ENSSPUG00000016701	-	51	52.941	ENSGMOG00000001160	trnau1apb	69	32.806	Gadus_morhua
ENSSPUG00000016701	-	82	36.015	ENSGACG00000014944	trnau1apb	70	36.923	Gasterosteus_aculeatus
ENSSPUG00000016701	-	99	60.194	ENSGAGG00000022384	-	99	60.194	Gopherus_agassizii
ENSSPUG00000016701	-	90	33.333	ENSHBUG00000018944	trnau1apb	70	36.905	Haplochromis_burtoni
ENSSPUG00000016701	-	82	36.437	ENSIPUG00000008843	tsp1l	69	38.866	Ictalurus_punctatus
ENSSPUG00000016701	-	82	37.600	ENSLBEG00000020480	trnau1apb	70	33.984	Labrus_bergylta
ENSSPUG00000016701	-	84	42.520	ENSLOCG00000013175	trnau1apb	69	38.168	Lepisosteus_oculatus
ENSSPUG00000016701	-	82	35.484	ENSMAMG00000012192	trnau1apb	70	35.458	Mastacembelus_armatus
ENSSPUG00000016701	-	82	37.450	ENSMZEG00005014852	trnau1apb	70	36.905	Maylandia_zebra
ENSSPUG00000016701	-	82	55.952	ENSMGAG00000003234	-	98	55.020	Meleagris_gallopavo
ENSSPUG00000016701	-	79	34.387	ENSMMOG00000021521	trnau1apb	67	34.000	Mola_mola
ENSSPUG00000016701	-	80	34.413	ENSNBRG00000000751	trnau1apb	68	32.661	Neolamprologus_brichardi
ENSSPUG00000016701	-	82	36.948	ENSONIG00000016639	trnau1apb	67	35.081	Oreochromis_niloticus
ENSSPUG00000016701	-	82	36.187	ENSORLG00020004464	trnau1apb	74	38.224	Oryzias_latipes_hni
ENSSPUG00000016701	-	82	36.187	ENSORLG00015021098	trnau1apb	71	38.224	Oryzias_latipes_hsok
ENSSPUG00000016701	-	99	60.518	ENSPSIG00000004189	-	99	57.508	Pelodiscus_sinensis
ENSSPUG00000016701	-	82	36.260	ENSPFOG00000003938	trnau1apb	71	33.948	Poecilia_formosa
ENSSPUG00000016701	-	82	36.260	ENSPLAG00000015480	trnau1apb	71	33.948	Poecilia_latipinna
ENSSPUG00000016701	-	82	36.260	ENSPMEG00000012743	trnau1apb	71	33.948	Poecilia_mexicana
ENSSPUG00000016701	-	91	34.843	ENSPREG00000015035	trnau1apb	71	34.686	Poecilia_reticulata
ENSSPUG00000016701	-	90	34.050	ENSPNYG00000012127	trnau1apb	69	33.725	Pundamilia_nyererei
ENSSPUG00000016701	-	82	36.032	ENSPNAG00000019138	trnau1apb	68	38.462	Pygocentrus_nattereri
ENSSPUG00000016701	-	82	34.000	ENSSMAG00000001745	trnau1apb	71	32.422	Scophthalmus_maximus
ENSSPUG00000016701	-	82	35.743	ENSSDUG00000011109	trnau1apb	71	34.884	Seriola_dumerili
ENSSPUG00000016701	-	82	35.200	ENSSLDG00000012947	trnau1apb	71	34.884	Seriola_lalandi_dorsalis
ENSSPUG00000016701	-	82	36.546	ENSSPAG00000006917	trnau1apb	71	35.271	Stegastes_partitus
ENSSPUG00000016701	-	82	35.573	ENSTRUG00000008608	trnau1apb	70	35.249	Takifugu_rubripes
ENSSPUG00000016701	-	82	32.540	ENSTNIG00000000916	trnau1apb	67	31.474	Tetraodon_nigroviridis
ENSSPUG00000016701	-	82	33.198	ENSXCOG00000007974	trnau1apb	67	34.538	Xiphophorus_couchianus
ENSSPUG00000016701	-	82	36.260	ENSXMAG00000029918	trnau1apb	71	34.686	Xiphophorus_maculatus