EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000016817 (Gene tree)
Gene ID: -
Gene Symbol: SUB1
Alias: PC4|p14|p15
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 17097 bases
Position: chrQEPC01002120.1:3094477-3111573
Accession: 19985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000021918	PC4	PF02229.16	5.6e-25	1	1
ENSSPUP00000021916	PC4	PF02229.16	9.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000023352	SUB1-201	681	-	ENSSPUP00000021916	114 (aa)	-	-
ENSSPUT00000023355	SUB1-202	600	-	ENSSPUP00000021918	126 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000016817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000016817's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000016817	SUB1	100	89.764	ENSG00000113387	SUB1	100	89.764	Homo_sapiens
ENSSPUG00000016817	SUB1	100	72.222	ENSAPOG00000005917	SUB1	100	71.429	Acanthochromis_polyacanthus
ENSSPUG00000016817	SUB1	100	88.976	ENSAMEG00000006238	SUB1	95	88.976	Ailuropoda_melanoleuca
ENSSPUG00000016817	SUB1	100	73.810	ENSACIG00000015976	sub1b	100	73.016	Amphilophus_citrinellus
ENSSPUG00000016817	SUB1	85	73.832	ENSAOCG00000002323	-	75	79.121	Amphiprion_ocellaris
ENSSPUG00000016817	SUB1	91	74.783	ENSAOCG00000007313	-	76	79.787	Amphiprion_ocellaris
ENSSPUG00000016817	SUB1	100	74.603	ENSAPEG00000024347	sub1b	100	73.810	Amphiprion_percula
ENSSPUG00000016817	SUB1	88	69.307	ENSAPEG00000017151	-	71	79.121	Amphiprion_percula
ENSSPUG00000016817	SUB1	52	70.769	ENSAPEG00000014618	-	62	70.769	Amphiprion_percula
ENSSPUG00000016817	SUB1	100	72.222	ENSATEG00000010340	sub1b	100	71.429	Anabas_testudineus
ENSSPUG00000016817	SUB1	100	85.714	ENSACAG00000007974	SUB1	100	82.707	Anolis_carolinensis
ENSSPUG00000016817	SUB1	100	87.302	ENSANAG00000023392	-	83	87.302	Aotus_nancymaae
ENSSPUG00000016817	SUB1	100	89.764	ENSANAG00000011651	-	100	89.764	Aotus_nancymaae
ENSSPUG00000016817	SUB1	100	73.810	ENSACLG00000016875	sub1b	64	73.016	Astatotilapia_calliptera
ENSSPUG00000016817	SUB1	100	73.228	ENSAMXG00000037104	sub1b	100	72.441	Astyanax_mexicanus
ENSSPUG00000016817	SUB1	100	89.764	ENSBTAG00000021965	SUB1	100	89.764	Bos_taurus
ENSSPUG00000016817	SUB1	88	88.119	ENSCJAG00000018718	SUB1	98	88.235	Callithrix_jacchus
ENSSPUG00000016817	SUB1	90	81.579	ENSCAFG00000024488	-	86	85.185	Canis_familiaris
ENSSPUG00000016817	SUB1	100	88.976	ENSCAFG00000018879	-	88	88.976	Canis_familiaris
ENSSPUG00000016817	SUB1	100	88.976	ENSCAFG00000016713	-	96	88.976	Canis_familiaris
ENSSPUG00000016817	SUB1	100	87.500	ENSCAFG00020011479	-	77	87.500	Canis_lupus_dingo
ENSSPUG00000016817	SUB1	100	88.976	ENSCAFG00020016840	-	100	88.976	Canis_lupus_dingo
ENSSPUG00000016817	SUB1	100	89.764	ENSCHIG00000008460	SUB1	100	89.764	Capra_hircus
ENSSPUG00000016817	SUB1	100	77.953	ENSTSYG00000035366	-	83	77.953	Carlito_syrichta
ENSSPUG00000016817	SUB1	100	89.764	ENSTSYG00000029948	-	100	89.764	Carlito_syrichta
ENSSPUG00000016817	SUB1	100	82.308	ENSTSYG00000014069	-	93	83.077	Carlito_syrichta
ENSSPUG00000016817	SUB1	100	89.764	ENSCPOG00000031334	SUB1	100	89.764	Cavia_porcellus
ENSSPUG00000016817	SUB1	100	83.465	ENSCCAG00000033751	-	95	85.827	Cebus_capucinus
ENSSPUG00000016817	SUB1	100	80.952	ENSCCAG00000017043	-	93	80.952	Cebus_capucinus
ENSSPUG00000016817	SUB1	100	85.827	ENSCCAG00000020604	-	100	85.827	Cebus_capucinus
ENSSPUG00000016817	SUB1	100	89.764	ENSCCAG00000023605	-	100	89.764	Cebus_capucinus
ENSSPUG00000016817	SUB1	100	89.764	ENSCATG00000031199	SUB1	100	89.764	Cercocebus_atys
ENSSPUG00000016817	SUB1	100	89.062	ENSCLAG00000007522	SUB1	100	89.062	Chinchilla_lanigera
ENSSPUG00000016817	SUB1	100	89.764	ENSCSAG00000017172	-	100	89.764	Chlorocebus_sabaeus
ENSSPUG00000016817	SUB1	100	87.402	ENSCSAG00000019449	-	100	87.402	Chlorocebus_sabaeus
ENSSPUG00000016817	SUB1	100	99.206	ENSCPBG00000024218	SUB1	79	99.206	Chrysemys_picta_bellii
ENSSPUG00000016817	SUB1	100	73.810	ENSCANG00000028665	-	90	73.810	Colobus_angolensis_palliatus
ENSSPUG00000016817	SUB1	100	89.764	ENSCANG00000029372	SUB1	100	89.764	Colobus_angolensis_palliatus
ENSSPUG00000016817	SUB1	100	86.614	ENSCGRG00001003473	-	100	86.614	Cricetulus_griseus_chok1gshd
ENSSPUG00000016817	SUB1	100	75.591	ENSCGRG00001014660	-	100	75.591	Cricetulus_griseus_chok1gshd
ENSSPUG00000016817	SUB1	100	70.866	ENSCGRG00001016254	-	100	70.866	Cricetulus_griseus_chok1gshd
ENSSPUG00000016817	SUB1	100	86.614	ENSCGRG00000001133	-	100	86.614	Cricetulus_griseus_crigri
ENSSPUG00000016817	SUB1	100	75.591	ENSCGRG00000019368	-	100	75.591	Cricetulus_griseus_crigri
ENSSPUG00000016817	SUB1	100	73.228	ENSCGRG00000001489	-	100	73.228	Cricetulus_griseus_crigri
ENSSPUG00000016817	SUB1	100	71.429	ENSDARG00000007720	sub1b	100	69.048	Danio_rerio
ENSSPUG00000016817	SUB1	99	75.200	ENSDARG00000053446	sub1a	100	76.984	Danio_rerio
ENSSPUG00000016817	SUB1	100	85.827	ENSDNOG00000032396	-	100	85.827	Dasypus_novemcinctus
ENSSPUG00000016817	SUB1	100	87.402	ENSDNOG00000040794	-	100	87.402	Dasypus_novemcinctus
ENSSPUG00000016817	SUB1	100	88.189	ENSDORG00000013916	Sub1	100	88.189	Dipodomys_ordii
ENSSPUG00000016817	SUB1	100	89.764	ENSEASG00005007099	SUB1	100	89.764	Equus_asinus_asinus
ENSSPUG00000016817	SUB1	100	89.764	ENSECAG00000012399	SUB1	100	89.764	Equus_caballus
ENSSPUG00000016817	SUB1	79	86.139	ENSEEUG00000000436	SUB1	93	90.526	Erinaceus_europaeus
ENSSPUG00000016817	SUB1	100	88.976	ENSFCAG00000037288	SUB1	100	88.976	Felis_catus
ENSSPUG00000016817	SUB1	100	96.032	ENSFALG00000002143	SUB1	87	96.032	Ficedula_albicollis
ENSSPUG00000016817	SUB1	100	89.764	ENSFDAG00000017179	SUB1	100	89.764	Fukomys_damarensis
ENSSPUG00000016817	SUB1	100	51.969	ENSGALG00000027147	-	75	57.895	Gallus_gallus
ENSSPUG00000016817	SUB1	100	94.444	ENSGALG00000034905	-	100	94.444	Gallus_gallus
ENSSPUG00000016817	SUB1	100	98.413	ENSGALG00000003248	SUB1	100	98.413	Gallus_gallus
ENSSPUG00000016817	SUB1	100	71.429	ENSGACG00000003912	sub1b	100	70.635	Gasterosteus_aculeatus
ENSSPUG00000016817	SUB1	100	97.619	ENSGAGG00000013535	SUB1	100	97.619	Gopherus_agassizii
ENSSPUG00000016817	SUB1	100	89.764	ENSGGOG00000040900	SUB1	100	89.764	Gorilla_gorilla
ENSSPUG00000016817	SUB1	82	78.641	ENSHBUG00000013953	sub1b	70	78.723	Haplochromis_burtoni
ENSSPUG00000016817	SUB1	100	89.764	ENSHGLG00000006749	SUB1	100	89.764	Heterocephalus_glaber_female
ENSSPUG00000016817	SUB1	100	89.764	ENSHGLG00100014344	SUB1	100	89.764	Heterocephalus_glaber_male
ENSSPUG00000016817	SUB1	100	69.048	ENSHCOG00000001809	sub1b	100	68.254	Hippocampus_comes
ENSSPUG00000016817	SUB1	100	73.016	ENSIPUG00000008166	sub1	100	70.635	Ictalurus_punctatus
ENSSPUG00000016817	SUB1	100	71.318	ENSIPUG00000024367	SUB1	100	70.543	Ictalurus_punctatus
ENSSPUG00000016817	SUB1	100	88.976	ENSSTOG00000019364	SUB1	100	88.976	Ictidomys_tridecemlineatus
ENSSPUG00000016817	SUB1	100	84.252	ENSJJAG00000018885	Sub1	100	84.252	Jaculus_jaculus
ENSSPUG00000016817	SUB1	99	72.800	ENSLBEG00000010728	sub1b	100	71.429	Labrus_bergylta
ENSSPUG00000016817	SUB1	52	90.769	ENSLACG00000001068	SUB1	100	90.769	Latimeria_chalumnae
ENSSPUG00000016817	SUB1	100	76.984	ENSLOCG00000006692	sub1b	100	76.190	Lepisosteus_oculatus
ENSSPUG00000016817	SUB1	100	88.976	ENSLAFG00000011006	-	100	89.764	Loxodonta_africana
ENSSPUG00000016817	SUB1	100	88.976	ENSLAFG00000032088	-	100	89.764	Loxodonta_africana
ENSSPUG00000016817	SUB1	100	89.764	ENSMFAG00000040728	SUB1	100	89.764	Macaca_fascicularis
ENSSPUG00000016817	SUB1	100	78.740	ENSMFAG00000045643	-	61	81.102	Macaca_fascicularis
ENSSPUG00000016817	SUB1	100	89.764	ENSMMUG00000046181	SUB1	100	89.764	Macaca_mulatta
ENSSPUG00000016817	SUB1	100	89.764	ENSMNEG00000037046	SUB1	100	89.764	Macaca_nemestrina
ENSSPUG00000016817	SUB1	100	87.402	ENSMLEG00000030509	-	94	87.402	Mandrillus_leucophaeus
ENSSPUG00000016817	SUB1	100	73.016	ENSMLEG00000043436	-	90	73.016	Mandrillus_leucophaeus
ENSSPUG00000016817	SUB1	100	89.764	ENSMLEG00000037017	-	100	89.764	Mandrillus_leucophaeus
ENSSPUG00000016817	SUB1	100	72.222	ENSMAMG00000018428	sub1b	100	71.429	Mastacembelus_armatus
ENSSPUG00000016817	SUB1	100	73.810	ENSMZEG00005021252	sub1b	100	73.016	Maylandia_zebra
ENSSPUG00000016817	SUB1	100	98.413	ENSMGAG00000002906	SUB1	100	98.413	Meleagris_gallopavo
ENSSPUG00000016817	SUB1	100	51.181	ENSMGAG00000001200	-	95	51.181	Meleagris_gallopavo
ENSSPUG00000016817	SUB1	100	86.614	ENSMAUG00000020232	Sub1	100	86.614	Mesocricetus_auratus
ENSSPUG00000016817	SUB1	100	89.764	ENSMICG00000014535	SUB1	100	89.764	Microcebus_murinus
ENSSPUG00000016817	SUB1	100	77.165	ENSMOCG00000016424	-	100	76.378	Microtus_ochrogaster
ENSSPUG00000016817	SUB1	100	85.827	ENSMOCG00000018930	-	100	85.827	Microtus_ochrogaster
ENSSPUG00000016817	SUB1	100	83.453	ENSMODG00000020410	SUB1	100	82.734	Monodelphis_domestica
ENSSPUG00000016817	SUB1	100	75.397	ENSMALG00000007163	sub1b	81	74.603	Monopterus_albus
ENSSPUG00000016817	SUB1	100	86.614	MGP_CAROLIEiJ_G0019676	Sub1	100	86.614	Mus_caroli
ENSSPUG00000016817	SUB1	100	87.402	ENSMUSG00000022205	Sub1	100	87.402	Mus_musculus
ENSSPUG00000016817	SUB1	100	85.827	MGP_PahariEiJ_G0016056	Sub1	100	85.827	Mus_pahari
ENSSPUG00000016817	SUB1	100	87.402	MGP_SPRETEiJ_G0020573	Sub1	100	87.402	Mus_spretus
ENSSPUG00000016817	SUB1	100	88.976	ENSMPUG00000015185	-	100	88.976	Mustela_putorius_furo
ENSSPUG00000016817	SUB1	100	88.189	ENSMPUG00000018418	-	100	88.189	Mustela_putorius_furo
ENSSPUG00000016817	SUB1	100	84.252	ENSMLUG00000009236	-	95	84.252	Myotis_lucifugus
ENSSPUG00000016817	SUB1	100	89.764	ENSMLUG00000013685	-	95	89.764	Myotis_lucifugus
ENSSPUG00000016817	SUB1	100	76.984	ENSNGAG00000017212	-	100	76.984	Nannospalax_galili
ENSSPUG00000016817	SUB1	100	87.402	ENSNGAG00000014072	-	100	87.402	Nannospalax_galili
ENSSPUG00000016817	SUB1	100	83.333	ENSNGAG00000010782	-	84	83.333	Nannospalax_galili
ENSSPUG00000016817	SUB1	82	77.670	ENSNBRG00000008451	sub1b	76	77.660	Neolamprologus_brichardi
ENSSPUG00000016817	SUB1	100	88.976	ENSNLEG00000018383	-	95	89.764	Nomascus_leucogenys
ENSSPUG00000016817	SUB1	100	88.976	ENSNLEG00000036068	SUB1	100	88.976	Nomascus_leucogenys
ENSSPUG00000016817	SUB1	100	84.921	ENSNLEG00000035968	-	100	84.921	Nomascus_leucogenys
ENSSPUG00000016817	SUB1	100	92.063	ENSMEUG00000007770	SUB1	100	92.063	Notamacropus_eugenii
ENSSPUG00000016817	SUB1	100	88.189	ENSOPRG00000012887	SUB1	100	88.189	Ochotona_princeps
ENSSPUG00000016817	SUB1	85	86.111	ENSODEG00000015114	-	98	86.066	Octodon_degus
ENSSPUG00000016817	SUB1	100	83.465	ENSODEG00000014558	-	84	84.252	Octodon_degus
ENSSPUG00000016817	SUB1	100	89.764	ENSODEG00000001937	-	100	89.764	Octodon_degus
ENSSPUG00000016817	SUB1	100	94.444	ENSOANG00000002328	SUB1	95	94.444	Ornithorhynchus_anatinus
ENSSPUG00000016817	SUB1	100	85.039	ENSOCUG00000006262	SUB1	60	87.402	Oryctolagus_cuniculus
ENSSPUG00000016817	SUB1	100	89.764	ENSOGAG00000009012	-	100	89.764	Otolemur_garnettii
ENSSPUG00000016817	SUB1	98	88.710	ENSOGAG00000000337	-	100	88.710	Otolemur_garnettii
ENSSPUG00000016817	SUB1	100	89.764	ENSOARG00000012154	SUB1	100	89.764	Ovis_aries
ENSSPUG00000016817	SUB1	100	89.764	ENSPPAG00000011212	SUB1	100	89.764	Pan_paniscus
ENSSPUG00000016817	SUB1	100	88.976	ENSPPRG00000008557	SUB1	100	88.976	Panthera_pardus
ENSSPUG00000016817	SUB1	100	88.976	ENSPTIG00000009466	SUB1	100	88.976	Panthera_tigris_altaica
ENSSPUG00000016817	SUB1	100	83.465	ENSPTRG00000041644	-	100	84.252	Pan_troglodytes
ENSSPUG00000016817	SUB1	100	89.764	ENSPTRG00000048895	SUB1	100	89.764	Pan_troglodytes
ENSSPUG00000016817	SUB1	100	89.764	ENSPANG00000002644	-	95	89.764	Papio_anubis
ENSSPUG00000016817	SUB1	100	89.764	ENSPANG00000000339	-	97	89.764	Papio_anubis
ENSSPUG00000016817	SUB1	100	87.402	ENSPANG00000000672	-	91	87.402	Papio_anubis
ENSSPUG00000016817	SUB1	100	73.016	ENSPANG00000033272	-	90	73.016	Papio_anubis
ENSSPUG00000016817	SUB1	100	85.827	ENSPANG00000035601	-	100	82.677	Papio_anubis
ENSSPUG00000016817	SUB1	100	75.397	ENSPKIG00000016923	sub1b	100	74.603	Paramormyrops_kingsleyae
ENSSPUG00000016817	SUB1	100	98.413	ENSPSIG00000005731	SUB1	95	98.413	Pelodiscus_sinensis
ENSSPUG00000016817	SUB1	100	83.333	ENSPCIG00000020827	-	100	84.127	Phascolarctos_cinereus
ENSSPUG00000016817	SUB1	100	92.063	ENSPCIG00000020907	-	100	92.063	Phascolarctos_cinereus
ENSSPUG00000016817	SUB1	100	89.764	ENSPPYG00000015379	SUB1	100	89.764	Pongo_abelii
ENSSPUG00000016817	SUB1	100	84.252	ENSPPYG00000018347	-	100	85.039	Pongo_abelii
ENSSPUG00000016817	SUB1	100	89.764	ENSPCOG00000014391	SUB1	100	89.764	Propithecus_coquereli
ENSSPUG00000016817	SUB1	100	88.976	ENSPVAG00000004785	SUB1	100	88.976	Pteropus_vampyrus
ENSSPUG00000016817	SUB1	100	73.810	ENSPNYG00000010975	sub1b	100	73.016	Pundamilia_nyererei
ENSSPUG00000016817	SUB1	99	73.600	ENSPNAG00000005998	sub1b	99	72.800	Pygocentrus_nattereri
ENSSPUG00000016817	SUB1	100	74.016	ENSPNAG00000008693	sub1a	100	75.591	Pygocentrus_nattereri
ENSSPUG00000016817	SUB1	100	87.402	ENSRNOG00000050563	Sub1	100	87.402	Rattus_norvegicus
ENSSPUG00000016817	SUB1	100	84.252	ENSRBIG00000031233	SUB1	100	83.465	Rhinopithecus_bieti
ENSSPUG00000016817	SUB1	100	89.764	ENSRROG00000040438	SUB1	100	89.764	Rhinopithecus_roxellana
ENSSPUG00000016817	SUB1	100	79.365	ENSRROG00000042718	-	90	79.365	Rhinopithecus_roxellana
ENSSPUG00000016817	SUB1	100	89.764	ENSSBOG00000026994	SUB1	100	89.764	Saimiri_boliviensis_boliviensis
ENSSPUG00000016817	SUB1	100	92.063	ENSSHAG00000014986	SUB1	100	92.063	Sarcophilus_harrisii
ENSSPUG00000016817	SUB1	100	74.603	ENSSFOG00015017283	sub1b	100	72.222	Scleropages_formosus
ENSSPUG00000016817	SUB1	100	77.953	ENSSFOG00015018386	sub1b	100	77.953	Scleropages_formosus
ENSSPUG00000016817	SUB1	100	72.222	ENSSMAG00000000313	sub1b	100	71.429	Scophthalmus_maximus
ENSSPUG00000016817	SUB1	100	73.016	ENSSDUG00000013854	sub1b	76	76.984	Seriola_dumerili
ENSSPUG00000016817	SUB1	100	73.016	ENSSLDG00000000852	sub1b	100	72.222	Seriola_lalandi_dorsalis
ENSSPUG00000016817	SUB1	100	73.016	ENSSPAG00000019363	sub1b	100	72.222	Stegastes_partitus
ENSSPUG00000016817	SUB1	100	89.764	ENSSSCG00000032650	-	100	89.764	Sus_scrofa
ENSSPUG00000016817	SUB1	100	89.764	ENSSSCG00000040294	-	87	89.764	Sus_scrofa
ENSSPUG00000016817	SUB1	100	94.444	ENSTGUG00000001918	SUB1	100	94.444	Taeniopygia_guttata
ENSSPUG00000016817	SUB1	100	69.841	ENSTRUG00000024420	sub1b	100	71.429	Takifugu_rubripes
ENSSPUG00000016817	SUB1	100	70.635	ENSTNIG00000002700	sub1b	100	69.841	Tetraodon_nigroviridis
ENSSPUG00000016817	SUB1	99	81.746	ENSTBEG00000015821	-	100	81.746	Tupaia_belangeri
ENSSPUG00000016817	SUB1	100	88.189	ENSTBEG00000004053	-	100	88.189	Tupaia_belangeri
ENSSPUG00000016817	SUB1	100	81.890	ENSTBEG00000012861	-	100	84.252	Tupaia_belangeri
ENSSPUG00000016817	SUB1	100	83.465	ENSTBEG00000011247	-	99	83.465	Tupaia_belangeri
ENSSPUG00000016817	SUB1	100	84.252	ENSTBEG00000001790	-	100	84.252	Tupaia_belangeri
ENSSPUG00000016817	SUB1	100	88.189	ENSTBEG00000006504	-	100	88.189	Tupaia_belangeri
ENSSPUG00000016817	SUB1	80	89.216	ENSTTRG00000017324	SUB1	92	89.474	Tursiops_truncatus
ENSSPUG00000016817	SUB1	100	88.976	ENSUAMG00000000182	SUB1	100	88.976	Ursus_americanus
ENSSPUG00000016817	SUB1	100	88.976	ENSUMAG00000013792	SUB1	100	88.976	Ursus_maritimus
ENSSPUG00000016817	SUB1	100	80.952	ENSVPAG00000011012	SUB1	100	80.952	Vicugna_pacos
ENSSPUG00000016817	SUB1	95	81.651	ENSVVUG00000025193	-	92	82.727	Vulpes_vulpes
ENSSPUG00000016817	SUB1	100	88.976	ENSVVUG00000022166	-	100	88.976	Vulpes_vulpes
ENSSPUG00000016817	SUB1	100	82.812	ENSXETG00000027218	sub1	100	82.812	Xenopus_tropicalis