EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000017271 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 10022 bases
Position: chrQEPC01003614.1:492829-502850
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000022476	Nucleoplasmin	PF03066.15	9.7e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000023959	-	769	-	ENSSPUP00000022476	198 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000017271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000017271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000017271	-	51	45.714	ENSSPUG00000011875	NPM3	67	44.860
ENSSPUG00000017271	-	99	86.224	ENSSPUG00000015604	-	98	86.224

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000017271	-	50	57.000	ENSACIG00000019100	npm1b	59	57.000	Amphilophus_citrinellus
ENSSPUG00000017271	-	80	74.843	ENSACAG00000015626	-	52	79.114	Anolis_carolinensis
ENSSPUG00000017271	-	77	48.701	ENSACLG00000013812	npm1b	55	54.098	Astatotilapia_calliptera
ENSSPUG00000017271	-	77	51.316	ENSCAFG00000023359	-	56	51.316	Canis_familiaris
ENSSPUG00000017271	-	79	69.872	ENSCPBG00000027172	-	82	66.026	Chrysemys_picta_bellii
ENSSPUG00000017271	-	73	50.676	ENSCVAG00000013016	npm1b	50	49.057	Cyprinodon_variegatus
ENSSPUG00000017271	-	80	52.795	ENSDARG00000037675	npm1b	50	51.899	Danio_rerio
ENSSPUG00000017271	-	78	47.134	ENSELUG00000022123	npm1b	65	56.881	Esox_lucius
ENSSPUG00000017271	-	55	54.545	ENSGAFG00000017709	npm1b	51	49.068	Gambusia_affinis
ENSSPUG00000017271	-	81	83.750	ENSGAGG00000020250	-	53	82.911	Gopherus_agassizii
ENSSPUG00000017271	-	68	51.852	ENSLBEG00000001304	-	68	50.704	Labrus_bergylta
ENSSPUG00000017271	-	70	84.058	ENSMGAG00000001591	-	50	83.942	Meleagris_gallopavo
ENSSPUG00000017271	-	77	48.052	ENSNBRG00000014133	npm1b	78	48.052	Neolamprologus_brichardi
ENSSPUG00000017271	-	84	54.386	ENSPKIG00000020050	npm1b	53	54.386	Paramormyrops_kingsleyae
ENSSPUG00000017271	-	54	48.113	ENSPMGG00000008275	npm1b	58	58.824	Periophthalmus_magnuspinnatus
ENSSPUG00000017271	-	73	50.000	ENSPFOG00000018357	npm1b	50	48.428	Poecilia_formosa
ENSSPUG00000017271	-	77	48.701	ENSPNYG00000001427	npm1b	68	48.701	Pundamilia_nyererei
ENSSPUG00000017271	-	80	50.617	ENSSDUG00000007726	npm1b	50	50.943	Seriola_dumerili
ENSSPUG00000017271	-	80	50.617	ENSSLDG00000021396	npm1b	50	50.943	Seriola_lalandi_dorsalis
ENSSPUG00000017271	-	70	82.270	ENSTGUG00000014970	-	51	82.143	Taeniopygia_guttata
ENSSPUG00000017271	-	80	68.944	ENSXETG00000008403	npm1	52	69.620	Xenopus_tropicalis
ENSSPUG00000017271	-	80	48.148	ENSXMAG00000001986	npm1b	50	48.428	Xiphophorus_maculatus