EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000017344 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 12400 bases
Position: chrQEPC01009797.1:4433133-4445532
Accession: 6919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000022584	MBD	PF01429.19	4.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000024081	MBD4-201	1982	-	ENSSPUP00000022584	554 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000017344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000017344's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000017344	MBD4	91	49.524	ENSG00000129071	MBD4	68	85.475	Homo_sapiens
ENSSPUG00000017344	MBD4	91	52.446	ENSAMEG00000004562	MBD4	86	52.446	Ailuropoda_melanoleuca
ENSSPUG00000017344	MBD4	91	41.426	ENSATEG00000014594	MBD4	87	41.426	Anabas_testudineus
ENSSPUG00000017344	MBD4	96	48.282	ENSACAG00000014733	MBD4	93	48.282	Anolis_carolinensis
ENSSPUG00000017344	MBD4	91	51.874	ENSBTAG00000021645	MBD4	86	51.874	Bos_taurus
ENSSPUG00000017344	MBD4	91	49.609	ENSCJAG00000017293	MBD4	86	49.901	Callithrix_jacchus
ENSSPUG00000017344	MBD4	91	51.765	ENSCAFG00000004867	MBD4	86	51.765	Canis_familiaris
ENSSPUG00000017344	MBD4	91	51.765	ENSCAFG00020007082	MBD4	86	51.765	Canis_lupus_dingo
ENSSPUG00000017344	MBD4	91	51.677	ENSCHIG00000009760	MBD4	86	51.677	Capra_hircus
ENSSPUG00000017344	MBD4	91	49.902	ENSCCAG00000029796	MBD4	86	50.487	Cebus_capucinus
ENSSPUG00000017344	MBD4	91	48.924	ENSCATG00000035211	MBD4	86	48.924	Cercocebus_atys
ENSSPUG00000017344	MBD4	99	48.101	ENSCLAG00000008974	MBD4	94	48.101	Chinchilla_lanigera
ENSSPUG00000017344	MBD4	91	49.119	ENSCSAG00000009037	MBD4	86	49.119	Chlorocebus_sabaeus
ENSSPUG00000017344	MBD4	99	65.302	ENSCPBG00000014704	MBD4	97	65.302	Chrysemys_picta_bellii
ENSSPUG00000017344	MBD4	91	49.706	ENSCANG00000007120	MBD4	86	49.706	Colobus_angolensis_palliatus
ENSSPUG00000017344	MBD4	91	47.195	ENSCGRG00001003507	Mbd4	87	48.330	Cricetulus_griseus_chok1gshd
ENSSPUG00000017344	MBD4	91	47.195	ENSCGRG00000010974	Mbd4	87	48.330	Cricetulus_griseus_crigri
ENSSPUG00000017344	MBD4	91	51.373	ENSDNOG00000049619	MBD4	87	51.373	Dasypus_novemcinctus
ENSSPUG00000017344	MBD4	80	42.731	ENSDORG00000000902	-	88	42.731	Dipodomys_ordii
ENSSPUG00000017344	MBD4	60	53.586	ENSEBUG00000010816	mbd4	73	53.586	Eptatretus_burgeri
ENSSPUG00000017344	MBD4	91	52.941	ENSEASG00005014800	MBD4	87	52.941	Equus_asinus_asinus
ENSSPUG00000017344	MBD4	91	52.745	ENSECAG00000022106	MBD4	87	52.745	Equus_caballus
ENSSPUG00000017344	MBD4	87	47.619	ENSEEUG00000011459	MBD4	87	47.399	Erinaceus_europaeus
ENSSPUG00000017344	MBD4	91	51.473	ENSFCAG00000000083	MBD4	86	51.473	Felis_catus
ENSSPUG00000017344	MBD4	87	49.184	ENSFALG00000013663	MBD4	99	48.617	Ficedula_albicollis
ENSSPUG00000017344	MBD4	91	39.245	ENSGMOG00000013830	mbd4	100	39.245	Gadus_morhua
ENSSPUG00000017344	MBD4	99	64.831	ENSGAGG00000018644	MBD4	97	64.831	Gopherus_agassizii
ENSSPUG00000017344	MBD4	91	49.326	ENSGGOG00000010698	MBD4	86	49.518	Gorilla_gorilla
ENSSPUG00000017344	MBD4	91	50.980	ENSHGLG00000009034	MBD4	87	50.980	Heterocephalus_glaber_female
ENSSPUG00000017344	MBD4	91	51.176	ENSHGLG00100000135	MBD4	87	51.176	Heterocephalus_glaber_male
ENSSPUG00000017344	MBD4	91	51.866	ENSSTOG00000020663	MBD4	86	51.866	Ictidomys_tridecemlineatus
ENSSPUG00000017344	MBD4	60	64.091	ENSLBEG00000005669	MBD4	62	64.091	Labrus_bergylta
ENSSPUG00000017344	MBD4	91	45.057	ENSLOCG00000013054	MBD4	99	45.057	Lepisosteus_oculatus
ENSSPUG00000017344	MBD4	91	50.391	ENSLAFG00000010609	MBD4	86	50.391	Loxodonta_africana
ENSSPUG00000017344	MBD4	67	86.154	ENSMFAG00000002266	MBD4	69	86.154	Macaca_fascicularis
ENSSPUG00000017344	MBD4	67	86.154	ENSMMUG00000012723	MBD4	69	86.154	Macaca_mulatta
ENSSPUG00000017344	MBD4	63	87.850	ENSMNEG00000029752	MBD4	67	87.850	Macaca_nemestrina
ENSSPUG00000017344	MBD4	68	83.582	ENSMLEG00000024859	MBD4	71	83.582	Mandrillus_leucophaeus
ENSSPUG00000017344	MBD4	91	50.884	ENSMICG00000008022	MBD4	86	50.884	Microcebus_murinus
ENSSPUG00000017344	MBD4	91	51.081	ENSMODG00000006399	-	99	51.081	Monodelphis_domestica
ENSSPUG00000017344	MBD4	91	47.953	MGP_CAROLIEiJ_G0028760	Mbd4	87	47.953	Mus_caroli
ENSSPUG00000017344	MBD4	91	47.953	ENSMUSG00000030322	Mbd4	87	47.953	Mus_musculus
ENSSPUG00000017344	MBD4	99	45.863	MGP_PahariEiJ_G0022511	-	93	45.863	Mus_pahari
ENSSPUG00000017344	MBD4	91	47.554	MGP_SPRETEiJ_G0029788	Mbd4	87	47.554	Mus_spretus
ENSSPUG00000017344	MBD4	91	51.670	ENSMPUG00000017195	MBD4	86	51.670	Mustela_putorius_furo
ENSSPUG00000017344	MBD4	91	53.452	ENSMLUG00000014766	MBD4	91	53.452	Myotis_lucifugus
ENSSPUG00000017344	MBD4	91	49.710	ENSNLEG00000005337	MBD4	86	49.903	Nomascus_leucogenys
ENSSPUG00000017344	MBD4	91	49.031	ENSOPRG00000000473	MBD4	86	49.031	Ochotona_princeps
ENSSPUG00000017344	MBD4	72	40.452	ENSOANG00000004589	-	92	40.049	Ornithorhynchus_anatinus
ENSSPUG00000017344	MBD4	91	48.728	ENSOCUG00000013006	MBD4	86	48.728	Oryctolagus_cuniculus
ENSSPUG00000017344	MBD4	70	79.882	ENSOMEG00000008819	mbd4	85	79.882	Oryzias_melastigma
ENSSPUG00000017344	MBD4	91	51.581	ENSOGAG00000010236	MBD4	86	51.581	Otolemur_garnettii
ENSSPUG00000017344	MBD4	91	51.282	ENSOARG00000014699	MBD4	86	51.282	Ovis_aries
ENSSPUG00000017344	MBD4	91	48.369	ENSPPAG00000036528	MBD4	86	48.369	Pan_paniscus
ENSSPUG00000017344	MBD4	91	51.575	ENSPPRG00000016480	MBD4	85	51.575	Panthera_pardus
ENSSPUG00000017344	MBD4	91	49.615	ENSPTRG00000015377	MBD4	86	49.615	Pan_troglodytes
ENSSPUG00000017344	MBD4	67	86.154	ENSPANG00000015047	MBD4	69	86.154	Papio_anubis
ENSSPUG00000017344	MBD4	55	63.404	ENSPKIG00000012306	MBD4	51	63.404	Paramormyrops_kingsleyae
ENSSPUG00000017344	MBD4	98	62.032	ENSPSIG00000007892	MBD4	94	62.032	Pelodiscus_sinensis
ENSSPUG00000017344	MBD4	91	42.105	ENSPEMG00000006226	Mbd4	91	42.607	Peromyscus_maniculatus_bairdii
ENSSPUG00000017344	MBD4	96	49.071	ENSPCIG00000002276	-	98	49.071	Phascolarctos_cinereus
ENSSPUG00000017344	MBD4	91	48.851	ENSPPYG00000013417	MBD4	86	48.851	Pongo_abelii
ENSSPUG00000017344	MBD4	87	51.020	ENSPCAG00000012915	MBD4	85	51.020	Procavia_capensis
ENSSPUG00000017344	MBD4	92	52.930	ENSPVAG00000005238	MBD4	86	52.930	Pteropus_vampyrus
ENSSPUG00000017344	MBD4	52	74.269	ENSPNAG00000000509	mbd4	64	74.269	Pygocentrus_nattereri
ENSSPUG00000017344	MBD4	99	46.416	ENSRNOG00000010919	Mbd4	93	46.416	Rattus_norvegicus
ENSSPUG00000017344	MBD4	67	86.154	ENSRBIG00000027722	MBD4	69	86.154	Rhinopithecus_bieti
ENSSPUG00000017344	MBD4	67	86.154	ENSRROG00000029136	MBD4	69	86.154	Rhinopithecus_roxellana
ENSSPUG00000017344	MBD4	91	50.888	ENSSBOG00000016810	MBD4	86	50.888	Saimiri_boliviensis_boliviensis
ENSSPUG00000017344	MBD4	98	48.364	ENSSHAG00000012953	MBD4	92	48.364	Sarcophilus_harrisii
ENSSPUG00000017344	MBD4	52	78.857	ENSSFOG00015016292	mbd4	61	78.857	Scleropages_formosus
ENSSPUG00000017344	MBD4	70	80.000	ENSSDUG00000001365	mbd4	85	80.000	Seriola_dumerili
ENSSPUG00000017344	MBD4	56	79.646	ENSSLDG00000010295	MBD4	68	79.646	Seriola_lalandi_dorsalis
ENSSPUG00000017344	MBD4	86	43.232	ENSSARG00000004496	-	80	43.232	Sorex_araneus
ENSSPUG00000017344	MBD4	91	51.969	ENSSSCG00000033303	MBD4	86	51.969	Sus_scrofa
ENSSPUG00000017344	MBD4	65	52.778	ENSTBEG00000003041	-	62	52.778	Tupaia_belangeri
ENSSPUG00000017344	MBD4	91	52.745	ENSTTRG00000011265	MBD4	89	52.745	Tursiops_truncatus
ENSSPUG00000017344	MBD4	91	52.642	ENSUAMG00000000814	MBD4	99	52.642	Ursus_americanus
ENSSPUG00000017344	MBD4	91	52.446	ENSUMAG00000017542	MBD4	86	52.446	Ursus_maritimus
ENSSPUG00000017344	MBD4	50	55.484	ENSVPAG00000004040	-	50	55.484	Vicugna_pacos
ENSSPUG00000017344	MBD4	91	51.569	ENSVVUG00000014222	MBD4	86	51.569	Vulpes_vulpes
ENSSPUG00000017344	MBD4	50	74.619	ENSXETG00000026622	mbd4	58	74.619	Xenopus_tropicalis