EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000017425 (Gene tree)
Gene ID: -
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid specific
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 43695 bases
Position: chrQEPC01002445.1:3620635-3664329
Accession: 4861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000022988	ResIII	PF04851.15	1.7e-06	1	1
ENSSPUP00000022998	ResIII	PF04851.15	1.8e-06	1	1
ENSSPUP00000023011	ResIII	PF04851.15	1.9e-06	1	1
ENSSPUP00000023027	ResIII	PF04851.15	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000024520	HELLS-202	2364	-	ENSSPUP00000022998	787 (aa)	-	-
ENSSPUT00000024509	HELLS-201	2427	-	ENSSPUP00000022988	808 (aa)	-	-
ENSSPUT00000024553	HELLS-204	2277	-	ENSSPUP00000023027	758 (aa)	-	-
ENSSPUT00000024537	HELLS-203	2301	-	ENSSPUP00000023011	766 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000017425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000017425's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000017425	HELLS	70	36.881	ENSSPUG00000004633	SMARCAD1	86	36.881
ENSSPUG00000017425	HELLS	69	48.193	ENSSPUG00000007604	SMARCA5	64	45.455
ENSSPUG00000017425	HELLS	70	40.265	ENSSPUG00000016865	CHD1L	52	40.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000017425	HELLS	100	80.528	ENSG00000119969	HELLS	100	80.559	Homo_sapiens
ENSSPUG00000017425	HELLS	97	68.021	ENSAPOG00000007707	hells	99	65.157	Acanthochromis_polyacanthus
ENSSPUG00000017425	HELLS	100	80.528	ENSAMEG00000013525	HELLS	98	78.858	Ailuropoda_melanoleuca
ENSSPUG00000017425	HELLS	87	69.208	ENSACIG00000018996	hells	99	69.275	Amphilophus_citrinellus
ENSSPUG00000017425	HELLS	99	66.921	ENSAOCG00000006348	hells	96	65.299	Amphiprion_ocellaris
ENSSPUG00000017425	HELLS	99	66.794	ENSAPEG00000001422	hells	96	65.423	Amphiprion_percula
ENSSPUG00000017425	HELLS	99	67.130	ENSATEG00000008107	hells	97	66.795	Anabas_testudineus
ENSSPUG00000017425	HELLS	96	85.940	ENSAPLG00000002649	HELLS	99	83.842	Anas_platyrhynchos
ENSSPUG00000017425	HELLS	87	82.070	ENSACAG00000028785	HELLS	95	80.140	Anolis_carolinensis
ENSSPUG00000017425	HELLS	100	78.331	ENSANAG00000034765	-	97	81.765	Aotus_nancymaae
ENSSPUG00000017425	HELLS	99	65.020	ENSACLG00000007613	hells	99	64.375	Astatotilapia_calliptera
ENSSPUG00000017425	HELLS	86	67.947	ENSAMXG00000002088	hells	99	67.630	Astyanax_mexicanus
ENSSPUG00000017425	HELLS	83	82.589	ENSBTAG00000005979	HELLS	100	82.589	Bos_taurus
ENSSPUG00000017425	HELLS	100	78.954	ENSCJAG00000015819	HELLS	97	82.059	Callithrix_jacchus
ENSSPUG00000017425	HELLS	99	80.353	ENSCAFG00000008090	HELLS	98	79.075	Canis_familiaris
ENSSPUG00000017425	HELLS	98	79.497	ENSCAFG00020004809	HELLS	98	80.026	Canis_lupus_dingo
ENSSPUG00000017425	HELLS	99	80.370	ENSCHIG00000019462	HELLS	98	80.247	Capra_hircus
ENSSPUG00000017425	HELLS	100	79.774	ENSTSYG00000005811	-	99	80.344	Carlito_syrichta
ENSSPUG00000017425	HELLS	100	80.025	ENSCPOG00000003043	HELLS	98	78.736	Cavia_porcellus
ENSSPUG00000017425	HELLS	55	86.806	ENSCCAG00000026761	HELLS	99	81.609	Cebus_capucinus
ENSSPUG00000017425	HELLS	100	75.772	ENSCATG00000033830	HELLS	100	79.832	Cercocebus_atys
ENSSPUG00000017425	HELLS	100	80.025	ENSCLAG00000003938	HELLS	100	78.858	Chinchilla_lanigera
ENSSPUG00000017425	HELLS	87	82.628	ENSCSAG00000006181	HELLS	100	79.972	Chlorocebus_sabaeus
ENSSPUG00000017425	HELLS	87	88.543	ENSCPBG00000025739	HELLS	100	88.543	Chrysemys_picta_bellii
ENSSPUG00000017425	HELLS	100	75.653	ENSCANG00000037736	HELLS	100	80.084	Colobus_angolensis_palliatus
ENSSPUG00000017425	HELLS	100	80.454	ENSCGRG00001017410	Hells	100	79.218	Cricetulus_griseus_chok1gshd
ENSSPUG00000017425	HELLS	96	66.579	ENSCSEG00000016985	hells	99	65.077	Cynoglossus_semilaevis
ENSSPUG00000017425	HELLS	67	65.152	ENSCVAG00000000159	hells	97	66.160	Cyprinodon_variegatus
ENSSPUG00000017425	HELLS	96	68.511	ENSDARG00000057738	hells	94	66.749	Danio_rerio
ENSSPUG00000017425	HELLS	79	83.940	ENSDNOG00000017758	HELLS	100	82.650	Dasypus_novemcinctus
ENSSPUG00000017425	HELLS	100	79.523	ENSDORG00000011812	Hells	100	77.574	Dipodomys_ordii
ENSSPUG00000017425	HELLS	73	56.267	ENSEBUG00000016152	hells	91	54.233	Eptatretus_burgeri
ENSSPUG00000017425	HELLS	100	82.084	ENSEASG00005011764	HELLS	100	79.779	Equus_asinus_asinus
ENSSPUG00000017425	HELLS	100	78.954	ENSECAG00000018810	HELLS	98	78.954	Equus_caballus
ENSSPUG00000017425	HELLS	77	92.391	ENSEEUG00000007680	HELLS	77	92.391	Erinaceus_europaeus
ENSSPUG00000017425	HELLS	97	65.621	ENSELUG00000014909	hells	94	63.693	Esox_lucius
ENSSPUG00000017425	HELLS	87	83.358	ENSFCAG00000005206	HELLS	100	80.812	Felis_catus
ENSSPUG00000017425	HELLS	100	85.031	ENSFALG00000007136	HELLS	99	83.069	Ficedula_albicollis
ENSSPUG00000017425	HELLS	100	79.874	ENSFDAG00000010042	HELLS	100	78.467	Fukomys_damarensis
ENSSPUG00000017425	HELLS	99	66.288	ENSFHEG00000022950	hells	96	67.049	Fundulus_heteroclitus
ENSSPUG00000017425	HELLS	100	82.695	ENSGALG00000005451	HELLS	99	84.638	Gallus_gallus
ENSSPUG00000017425	HELLS	99	66.368	ENSGAFG00000001204	hells	94	64.365	Gambusia_affinis
ENSSPUG00000017425	HELLS	98	64.149	ENSGACG00000003897	hells	91	64.691	Gasterosteus_aculeatus
ENSSPUG00000017425	HELLS	87	87.553	ENSGAGG00000010269	HELLS	100	87.553	Gopherus_agassizii
ENSSPUG00000017425	HELLS	100	76.010	ENSGGOG00000008103	HELLS	100	80.420	Gorilla_gorilla
ENSSPUG00000017425	HELLS	99	66.837	ENSHBUG00000010270	hells	99	64.375	Haplochromis_burtoni
ENSSPUG00000017425	HELLS	100	80.832	ENSHGLG00000011377	-	100	78.493	Heterocephalus_glaber_female
ENSSPUG00000017425	HELLS	78	83.436	ENSHGLG00000006537	-	98	83.436	Heterocephalus_glaber_female
ENSSPUG00000017425	HELLS	86	74.556	ENSHGLG00100001957	-	93	72.535	Heterocephalus_glaber_male
ENSSPUG00000017425	HELLS	100	80.580	ENSHGLG00100017230	-	100	78.250	Heterocephalus_glaber_male
ENSSPUG00000017425	HELLS	87	68.398	ENSHCOG00000001119	hells	97	67.283	Hippocampus_comes
ENSSPUG00000017425	HELLS	99	67.640	ENSIPUG00000002634	HELLS	95	66.012	Ictalurus_punctatus
ENSSPUG00000017425	HELLS	100	80.905	ENSSTOG00000021976	HELLS	100	79.854	Ictidomys_tridecemlineatus
ENSSPUG00000017425	HELLS	99	78.590	ENSJJAG00000000865	Hells	99	77.819	Jaculus_jaculus
ENSSPUG00000017425	HELLS	99	66.539	ENSKMAG00000017279	hells	94	65.099	Kryptolebias_marmoratus
ENSSPUG00000017425	HELLS	99	67.433	ENSLBEG00000027807	hells	95	65.793	Labrus_bergylta
ENSSPUG00000017425	HELLS	100	81.211	ENSLAFG00000007049	HELLS	100	78.615	Loxodonta_africana
ENSSPUG00000017425	HELLS	100	80.151	ENSMFAG00000044053	HELLS	100	79.320	Macaca_fascicularis
ENSSPUG00000017425	HELLS	100	75.031	ENSMMUG00000017255	HELLS	99	80.231	Macaca_mulatta
ENSSPUG00000017425	HELLS	100	75.772	ENSMNEG00000042628	HELLS	100	79.832	Macaca_nemestrina
ENSSPUG00000017425	HELLS	100	80.151	ENSMLEG00000041751	HELLS	100	79.320	Mandrillus_leucophaeus
ENSSPUG00000017425	HELLS	96	66.182	ENSMAMG00000009850	hells	99	65.850	Mastacembelus_armatus
ENSSPUG00000017425	HELLS	99	66.837	ENSMZEG00005018414	hells	99	64.375	Maylandia_zebra
ENSSPUG00000017425	HELLS	97	84.176	ENSMGAG00000006818	HELLS	97	87.387	Meleagris_gallopavo
ENSSPUG00000017425	HELLS	97	80.965	ENSMAUG00000021941	Hells	96	79.898	Mesocricetus_auratus
ENSSPUG00000017425	HELLS	75	82.230	ENSMICG00000046554	-	93	82.384	Microcebus_murinus
ENSSPUG00000017425	HELLS	100	79.288	ENSMOCG00000019342	Hells	100	77.696	Microtus_ochrogaster
ENSSPUG00000017425	HELLS	99	61.219	ENSMMOG00000007950	hells	98	60.546	Mola_mola
ENSSPUG00000017425	HELLS	97	80.903	ENSMODG00000005589	-	50	80.025	Monodelphis_domestica
ENSSPUG00000017425	HELLS	99	62.910	ENSMALG00000010244	hells	94	62.142	Monopterus_albus
ENSSPUG00000017425	HELLS	100	79.271	MGP_CAROLIEiJ_G0022930	Hells	100	78.710	Mus_caroli
ENSSPUG00000017425	HELLS	100	78.769	ENSMUSG00000025001	Hells	100	78.224	Mus_musculus
ENSSPUG00000017425	HELLS	100	80.580	MGP_PahariEiJ_G0014423	Hells	100	78.954	Mus_pahari
ENSSPUG00000017425	HELLS	100	80.076	MGP_SPRETEiJ_G0023848	Hells	100	78.345	Mus_spretus
ENSSPUG00000017425	HELLS	99	80.328	ENSMPUG00000017131	HELLS	98	78.755	Mustela_putorius_furo
ENSSPUG00000017425	HELLS	99	80.377	ENSMLUG00000030511	HELLS	98	79.243	Myotis_lucifugus
ENSSPUG00000017425	HELLS	98	81.234	ENSNGAG00000014049	Hells	98	79.222	Nannospalax_galili
ENSSPUG00000017425	HELLS	99	62.060	ENSNBRG00000024242	hells	99	60.918	Neolamprologus_brichardi
ENSSPUG00000017425	HELLS	100	75.772	ENSNLEG00000012987	HELLS	100	80.532	Nomascus_leucogenys
ENSSPUG00000017425	HELLS	100	79.193	ENSODEG00000015916	HELLS	98	77.521	Octodon_degus
ENSSPUG00000017425	HELLS	99	66.582	ENSONIG00000013166	hells	94	64.938	Oreochromis_niloticus
ENSSPUG00000017425	HELLS	100	84.065	ENSOANG00000005139	HELLS	99	82.403	Ornithorhynchus_anatinus
ENSSPUG00000017425	HELLS	100	80.402	ENSOCUG00000026731	HELLS	98	79.101	Oryctolagus_cuniculus
ENSSPUG00000017425	HELLS	99	66.625	ENSORLG00000000987	hells	97	65.174	Oryzias_latipes
ENSSPUG00000017425	HELLS	99	66.498	ENSORLG00020003952	hells	97	64.677	Oryzias_latipes_hni
ENSSPUG00000017425	HELLS	99	66.751	ENSORLG00015010960	hells	97	64.055	Oryzias_latipes_hsok
ENSSPUG00000017425	HELLS	99	66.245	ENSOMEG00000000135	hells	94	64.994	Oryzias_melastigma
ENSSPUG00000017425	HELLS	100	80.151	ENSOGAG00000017145	HELLS	99	78.979	Otolemur_garnettii
ENSSPUG00000017425	HELLS	98	79.644	ENSOARG00000004495	HELLS	98	79.634	Ovis_aries
ENSSPUG00000017425	HELLS	100	76.247	ENSPPAG00000001726	HELLS	100	80.699	Pan_paniscus
ENSSPUG00000017425	HELLS	87	83.358	ENSPPRG00000005839	HELLS	100	80.812	Panthera_pardus
ENSSPUG00000017425	HELLS	99	80.605	ENSPTIG00000007647	HELLS	100	80.812	Panthera_tigris_altaica
ENSSPUG00000017425	HELLS	100	76.128	ENSPTRG00000002778	HELLS	100	79.745	Pan_troglodytes
ENSSPUG00000017425	HELLS	100	75.772	ENSPANG00000033528	HELLS	100	79.832	Papio_anubis
ENSSPUG00000017425	HELLS	99	66.076	ENSPKIG00000010890	hells	98	64.757	Paramormyrops_kingsleyae
ENSSPUG00000017425	HELLS	96	85.976	ENSPSIG00000005462	HELLS	100	84.111	Pelodiscus_sinensis
ENSSPUG00000017425	HELLS	99	61.699	ENSPMGG00000014690	hells	97	66.569	Periophthalmus_magnuspinnatus
ENSSPUG00000017425	HELLS	100	74.401	ENSPEMG00000017579	Hells	100	72.993	Peromyscus_maniculatus_bairdii
ENSSPUG00000017425	HELLS	97	62.982	ENSPMAG00000004376	hells	96	61.327	Petromyzon_marinus
ENSSPUG00000017425	HELLS	99	81.211	ENSPCIG00000013361	HELLS	97	79.878	Phascolarctos_cinereus
ENSSPUG00000017425	HELLS	99	64.520	ENSPFOG00000001954	hells	95	63.447	Poecilia_formosa
ENSSPUG00000017425	HELLS	99	64.430	ENSPLAG00000006504	hells	97	64.815	Poecilia_latipinna
ENSSPUG00000017425	HELLS	99	64.304	ENSPMEG00000003024	hells	97	64.672	Poecilia_mexicana
ENSSPUG00000017425	HELLS	99	64.892	ENSPREG00000020337	hells	95	63.647	Poecilia_reticulata
ENSSPUG00000017425	HELLS	100	76.128	ENSPPYG00000002502	HELLS	98	75.029	Pongo_abelii
ENSSPUG00000017425	HELLS	97	77.995	ENSPCAG00000013618	HELLS	84	80.000	Procavia_capensis
ENSSPUG00000017425	HELLS	100	79.397	ENSPCOG00000023985	HELLS	99	81.295	Propithecus_coquereli
ENSSPUG00000017425	HELLS	79	86.842	ENSPVAG00000017899	HELLS	74	86.842	Pteropus_vampyrus
ENSSPUG00000017425	HELLS	99	63.648	ENSPNYG00000009100	hells	99	62.861	Pundamilia_nyererei
ENSSPUG00000017425	HELLS	99	65.438	ENSPNAG00000029968	hells	97	65.773	Pygocentrus_nattereri
ENSSPUG00000017425	HELLS	100	79.397	ENSRNOG00000047692	LOC100911660	100	79.101	Rattus_norvegicus
ENSSPUG00000017425	HELLS	100	79.397	ENSRNOG00000047104	Hells	98	79.101	Rattus_norvegicus
ENSSPUG00000017425	HELLS	99	74.880	ENSRBIG00000041080	HELLS	99	80.966	Rhinopithecus_bieti
ENSSPUG00000017425	HELLS	100	76.082	ENSRROG00000040169	HELLS	100	79.832	Rhinopithecus_roxellana
ENSSPUG00000017425	HELLS	99	82.278	ENSSHAG00000014358	HELLS	99	80.000	Sarcophilus_harrisii
ENSSPUG00000017425	HELLS	97	69.701	ENSSFOG00015017895	hells	99	66.095	Scleropages_formosus
ENSSPUG00000017425	HELLS	99	66.071	ENSSMAG00000017423	hells	99	64.160	Scophthalmus_maximus
ENSSPUG00000017425	HELLS	99	67.305	ENSSDUG00000016924	hells	99	65.452	Seriola_dumerili
ENSSPUG00000017425	HELLS	99	65.217	ENSSLDG00000018960	hells	94	64.233	Seriola_lalandi_dorsalis
ENSSPUG00000017425	HELLS	99	66.667	ENSSPAG00000015579	hells	99	66.134	Stegastes_partitus
ENSSPUG00000017425	HELLS	100	81.281	ENSSSCG00000010486	HELLS	98	79.927	Sus_scrofa
ENSSPUG00000017425	HELLS	100	84.906	ENSTGUG00000007157	HELLS	99	83.131	Taeniopygia_guttata
ENSSPUG00000017425	HELLS	95	67.772	ENSTRUG00000000350	hells	97	64.669	Takifugu_rubripes
ENSSPUG00000017425	HELLS	99	55.666	ENSTNIG00000003738	hells	99	55.122	Tetraodon_nigroviridis
ENSSPUG00000017425	HELLS	100	80.296	ENSUAMG00000003343	HELLS	100	79.803	Ursus_americanus
ENSSPUG00000017425	HELLS	100	80.910	ENSUMAG00000004748	HELLS	99	83.942	Ursus_maritimus
ENSSPUG00000017425	HELLS	100	79.423	ENSVPAG00000010115	HELLS	98	78.441	Vicugna_pacos
ENSSPUG00000017425	HELLS	99	80.605	ENSVVUG00000022808	HELLS	98	79.146	Vulpes_vulpes
ENSSPUG00000017425	HELLS	99	64.109	ENSXCOG00000013840	hells	98	63.308	Xiphophorus_couchianus
ENSSPUG00000017425	HELLS	99	64.892	ENSXMAG00000005731	hells	97	65.763	Xiphophorus_maculatus