EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000017487 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 19349 bases
Position: chrQEPC01010291.1:6344683-6364031
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000022831	Ribonuc_P_40	PF08584.11	1.7e-92	1	1
ENSSPUP00000022834	Ribonuc_P_40	PF08584.11	1.3e-71	1	2
ENSSPUP00000022834	Ribonuc_P_40	PF08584.11	1.3e-71	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000024339	-	1095	-	ENSSPUP00000022831	364 (aa)	-	-
ENSSPUT00000024342	-	969	-	ENSSPUP00000022834	322 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000017487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000017487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000017487	-	81	94.576	ENSSPUG00000018950	-	100	94.576

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000017487	-	99	66.981	ENSG00000124787	RPP40	99	67.219	Homo_sapiens
ENSSPUG00000017487	-	88	31.988	ENSAPOG00000008660	rpp40	92	31.988	Acanthochromis_polyacanthus
ENSSPUG00000017487	-	99	68.056	ENSAMEG00000012938	RPP40	99	68.056	Ailuropoda_melanoleuca
ENSSPUG00000017487	-	99	36.512	ENSACIG00000003617	rpp40	99	36.512	Amphilophus_citrinellus
ENSSPUG00000017487	-	98	38.095	ENSAOCG00000011846	rpp40	99	38.095	Amphiprion_ocellaris
ENSSPUG00000017487	-	98	38.095	ENSAPEG00000001322	rpp40	99	38.095	Amphiprion_percula
ENSSPUG00000017487	-	98	39.276	ENSATEG00000006584	rpp40	99	40.111	Anabas_testudineus
ENSSPUG00000017487	-	83	77.558	ENSAPLG00000005691	RPP40	100	77.558	Anas_platyrhynchos
ENSSPUG00000017487	-	99	77.410	ENSACAG00000006550	RPP40	89	77.410	Anolis_carolinensis
ENSSPUG00000017487	-	99	65.833	ENSANAG00000029246	RPP40	99	65.833	Aotus_nancymaae
ENSSPUG00000017487	-	96	38.746	ENSACLG00000015883	rpp40	95	38.746	Astatotilapia_calliptera
ENSSPUG00000017487	-	98	48.179	ENSAMXG00000001755	rpp40	99	48.179	Astyanax_mexicanus
ENSSPUG00000017487	-	99	68.056	ENSBTAG00000003332	RPP40	99	68.056	Bos_taurus
ENSSPUG00000017487	-	99	66.111	ENSCJAG00000021373	RPP40	99	66.111	Callithrix_jacchus
ENSSPUG00000017487	-	99	69.722	ENSCAFG00000009435	RPP40	99	69.722	Canis_familiaris
ENSSPUG00000017487	-	99	69.722	ENSCAFG00020013380	RPP40	99	69.722	Canis_lupus_dingo
ENSSPUG00000017487	-	99	67.778	ENSCHIG00000016849	RPP40	99	68.874	Capra_hircus
ENSSPUG00000017487	-	99	67.610	ENSTSYG00000032857	RPP40	99	68.543	Carlito_syrichta
ENSSPUG00000017487	-	90	64.024	ENSCAPG00000004957	RPP40	98	64.024	Cavia_aperea
ENSSPUG00000017487	-	99	68.056	ENSCPOG00000005855	RPP40	99	68.056	Cavia_porcellus
ENSSPUG00000017487	-	99	65.723	ENSCCAG00000019809	RPP40	99	65.723	Cebus_capucinus
ENSSPUG00000017487	-	99	66.352	ENSCATG00000038787	RPP40	99	66.352	Cercocebus_atys
ENSSPUG00000017487	-	99	68.333	ENSCLAG00000003235	RPP40	99	68.333	Chinchilla_lanigera
ENSSPUG00000017487	-	99	65.556	ENSCSAG00000007307	RPP40	99	65.556	Chlorocebus_sabaeus
ENSSPUG00000017487	-	69	55.200	ENSCHOG00000005856	-	100	55.200	Choloepus_hoffmanni
ENSSPUG00000017487	-	100	85.989	ENSCPBG00000009003	RPP40	100	85.989	Chrysemys_picta_bellii
ENSSPUG00000017487	-	99	66.667	ENSCANG00000033965	RPP40	99	66.667	Colobus_angolensis_palliatus
ENSSPUG00000017487	-	99	66.111	ENSCGRG00001018328	Rpp40	99	66.111	Cricetulus_griseus_chok1gshd
ENSSPUG00000017487	-	99	66.111	ENSCGRG00000011344	Rpp40	99	66.111	Cricetulus_griseus_crigri
ENSSPUG00000017487	-	98	35.674	ENSCSEG00000015006	-	98	35.754	Cynoglossus_semilaevis
ENSSPUG00000017487	-	74	35.484	ENSCVAG00000012169	rpp40	100	35.484	Cyprinodon_variegatus
ENSSPUG00000017487	-	98	47.911	ENSDARG00000017605	rpp40	99	47.911	Danio_rerio
ENSSPUG00000017487	-	81	64.966	ENSDNOG00000048136	RPP40	99	64.966	Dasypus_novemcinctus
ENSSPUG00000017487	-	99	52.022	ENSDORG00000011196	-	99	52.022	Dipodomys_ordii
ENSSPUG00000017487	-	99	67.500	ENSDORG00000029944	-	99	67.500	Dipodomys_ordii
ENSSPUG00000017487	-	99	53.889	ENSETEG00000007458	RPP40	99	53.889	Echinops_telfairi
ENSSPUG00000017487	-	98	44.225	ENSEBUG00000000386	rpp40	99	44.548	Eptatretus_burgeri
ENSSPUG00000017487	-	99	67.500	ENSEASG00005012116	RPP40	79	67.500	Equus_asinus_asinus
ENSSPUG00000017487	-	99	67.222	ENSECAG00000017247	RPP40	79	67.222	Equus_caballus
ENSSPUG00000017487	-	81	51.361	ENSEEUG00000012087	RPP40	99	51.361	Erinaceus_europaeus
ENSSPUG00000017487	-	98	51.117	ENSELUG00000017004	rpp40	99	51.117	Esox_lucius
ENSSPUG00000017487	-	99	67.778	ENSFCAG00000009249	RPP40	99	67.778	Felis_catus
ENSSPUG00000017487	-	86	74.312	ENSFALG00000013166	RPP40	100	74.312	Ficedula_albicollis
ENSSPUG00000017487	-	80	56.357	ENSFDAG00000000265	-	99	56.357	Fukomys_damarensis
ENSSPUG00000017487	-	99	68.611	ENSFDAG00000013001	-	99	68.611	Fukomys_damarensis
ENSSPUG00000017487	-	98	40.056	ENSFHEG00000021429	rpp40	88	40.056	Fundulus_heteroclitus
ENSSPUG00000017487	-	87	46.429	ENSGMOG00000018653	rpp40	100	46.429	Gadus_morhua
ENSSPUG00000017487	-	100	75.000	ENSGALG00000036074	RPP40	100	75.000	Gallus_gallus
ENSSPUG00000017487	-	82	34.564	ENSGAFG00000004189	-	98	34.564	Gambusia_affinis
ENSSPUG00000017487	-	98	38.095	ENSGACG00000002472	rpp40	99	38.095	Gasterosteus_aculeatus
ENSSPUG00000017487	-	100	85.989	ENSGAGG00000012918	RPP40	100	85.989	Gopherus_agassizii
ENSSPUG00000017487	-	99	66.667	ENSGGOG00000013764	RPP40	99	66.667	Gorilla_gorilla
ENSSPUG00000017487	-	88	37.888	ENSHBUG00000009378	rpp40	92	37.888	Haplochromis_burtoni
ENSSPUG00000017487	-	99	67.778	ENSHGLG00000004871	RPP40	99	67.778	Heterocephalus_glaber_female
ENSSPUG00000017487	-	99	67.778	ENSHGLG00100002080	RPP40	99	67.778	Heterocephalus_glaber_male
ENSSPUG00000017487	-	96	32.670	ENSHCOG00000013264	-	94	32.670	Hippocampus_comes
ENSSPUG00000017487	-	99	48.333	ENSIPUG00000008951	RPP40	99	48.333	Ictalurus_punctatus
ENSSPUG00000017487	-	99	67.222	ENSSTOG00000011199	RPP40	99	67.222	Ictidomys_tridecemlineatus
ENSSPUG00000017487	-	99	64.722	ENSJJAG00000020629	Rpp40	99	64.722	Jaculus_jaculus
ENSSPUG00000017487	-	98	37.255	ENSKMAG00000019358	rpp40	99	37.255	Kryptolebias_marmoratus
ENSSPUG00000017487	-	98	40.616	ENSLBEG00000022724	rpp40	99	40.616	Labrus_bergylta
ENSSPUG00000017487	-	99	60.278	ENSLACG00000014848	RPP40	99	60.278	Latimeria_chalumnae
ENSSPUG00000017487	-	99	53.056	ENSLOCG00000011650	rpp40	99	53.056	Lepisosteus_oculatus
ENSSPUG00000017487	-	83	68.874	ENSLAFG00000007530	RPP40	99	68.874	Loxodonta_africana
ENSSPUG00000017487	-	99	66.667	ENSMFAG00000043100	RPP40	99	66.667	Macaca_fascicularis
ENSSPUG00000017487	-	99	66.667	ENSMMUG00000004966	RPP40	99	66.667	Macaca_mulatta
ENSSPUG00000017487	-	99	66.667	ENSMNEG00000041986	RPP40	99	67.110	Macaca_nemestrina
ENSSPUG00000017487	-	98	58.543	ENSMLEG00000040851	RPP40	100	67.416	Mandrillus_leucophaeus
ENSSPUG00000017487	-	98	39.776	ENSMAMG00000019551	rpp40	98	39.776	Mastacembelus_armatus
ENSSPUG00000017487	-	98	39.216	ENSMZEG00005019475	rpp40	99	39.216	Maylandia_zebra
ENSSPUG00000017487	-	89	75.617	ENSMGAG00000004009	RPP40	90	75.617	Meleagris_gallopavo
ENSSPUG00000017487	-	99	68.333	ENSMAUG00000010268	Rpp40	99	68.333	Mesocricetus_auratus
ENSSPUG00000017487	-	99	66.944	ENSMICG00000003297	RPP40	99	66.352	Microcebus_murinus
ENSSPUG00000017487	-	99	66.389	ENSMOCG00000000305	Rpp40	99	66.389	Microtus_ochrogaster
ENSSPUG00000017487	-	98	34.454	ENSMMOG00000020591	-	99	34.454	Mola_mola
ENSSPUG00000017487	-	99	70.637	ENSMODG00000009826	RPP40	99	70.637	Monodelphis_domestica
ENSSPUG00000017487	-	98	40.056	ENSMALG00000020133	rpp40	99	40.056	Monopterus_albus
ENSSPUG00000017487	-	99	68.056	MGP_CAROLIEiJ_G0018429	Rpp40	99	68.056	Mus_caroli
ENSSPUG00000017487	-	99	68.056	ENSMUSG00000021418	Rpp40	99	68.056	Mus_musculus
ENSSPUG00000017487	-	99	68.056	MGP_PahariEiJ_G0019497	Rpp40	99	68.056	Mus_pahari
ENSSPUG00000017487	-	99	67.778	MGP_SPRETEiJ_G0019309	Rpp40	99	67.778	Mus_spretus
ENSSPUG00000017487	-	99	67.222	ENSMPUG00000000530	RPP40	93	67.222	Mustela_putorius_furo
ENSSPUG00000017487	-	99	64.722	ENSMLUG00000000501	RPP40	99	64.722	Myotis_lucifugus
ENSSPUG00000017487	-	99	68.333	ENSNGAG00000023955	-	99	68.333	Nannospalax_galili
ENSSPUG00000017487	-	94	61.224	ENSNGAG00000022529	-	99	61.224	Nannospalax_galili
ENSSPUG00000017487	-	88	35.913	ENSNBRG00000017465	rpp40	86	36.086	Neolamprologus_brichardi
ENSSPUG00000017487	-	99	66.981	ENSNLEG00000034397	RPP40	99	66.981	Nomascus_leucogenys
ENSSPUG00000017487	-	99	64.444	ENSMEUG00000005300	RPP40	99	64.444	Notamacropus_eugenii
ENSSPUG00000017487	-	99	68.333	ENSODEG00000007255	-	99	68.333	Octodon_degus
ENSSPUG00000017487	-	99	64.444	ENSODEG00000018153	-	99	64.444	Octodon_degus
ENSSPUG00000017487	-	88	64.596	ENSODEG00000006170	-	100	64.596	Octodon_degus
ENSSPUG00000017487	-	98	38.936	ENSONIG00000014016	rpp40	98	38.936	Oreochromis_niloticus
ENSSPUG00000017487	-	83	72.368	ENSOANG00000001200	RPP40	100	72.368	Ornithorhynchus_anatinus
ENSSPUG00000017487	-	98	62.011	ENSOCUG00000000354	RPP40	99	62.011	Oryctolagus_cuniculus
ENSSPUG00000017487	-	99	37.778	ENSORLG00000008242	-	100	37.778	Oryzias_latipes
ENSSPUG00000017487	-	99	37.845	ENSORLG00020013745	-	91	37.845	Oryzias_latipes_hni
ENSSPUG00000017487	-	99	38.056	ENSORLG00015000887	-	100	38.056	Oryzias_latipes_hsok
ENSSPUG00000017487	-	99	39.167	ENSOMEG00000002747	rpp40	100	39.167	Oryzias_melastigma
ENSSPUG00000017487	-	99	68.056	ENSOGAG00000006055	RPP40	99	68.056	Otolemur_garnettii
ENSSPUG00000017487	-	88	68.519	ENSOARG00000018783	RPP40	99	69.868	Ovis_aries
ENSSPUG00000017487	-	99	66.667	ENSPPAG00000023703	RPP40	99	66.667	Pan_paniscus
ENSSPUG00000017487	-	99	67.500	ENSPPRG00000005612	RPP40	99	67.500	Panthera_pardus
ENSSPUG00000017487	-	99	62.222	ENSPTIG00000018847	RPP40	99	62.222	Panthera_tigris_altaica
ENSSPUG00000017487	-	99	66.667	ENSPTRG00000017690	RPP40	99	66.667	Pan_troglodytes
ENSSPUG00000017487	-	99	66.038	ENSPANG00000017865	RPP40	99	66.038	Papio_anubis
ENSSPUG00000017487	-	98	50.000	ENSPKIG00000006311	rpp40	99	50.000	Paramormyrops_kingsleyae
ENSSPUG00000017487	-	61	82.432	ENSPSIG00000007854	RPP40	100	82.432	Pelodiscus_sinensis
ENSSPUG00000017487	-	93	59.644	ENSPEMG00000020809	Rpp40	91	59.644	Peromyscus_maniculatus_bairdii
ENSSPUG00000017487	-	75	48.540	ENSPMAG00000008412	rpp40	99	48.540	Petromyzon_marinus
ENSSPUG00000017487	-	99	70.556	ENSPCIG00000010682	RPP40	99	70.556	Phascolarctos_cinereus
ENSSPUG00000017487	-	98	37.883	ENSPFOG00000011460	rpp40	98	37.883	Poecilia_formosa
ENSSPUG00000017487	-	98	37.535	ENSPLAG00000001334	rpp40	99	37.535	Poecilia_latipinna
ENSSPUG00000017487	-	98	38.375	ENSPMEG00000007721	rpp40	99	38.375	Poecilia_mexicana
ENSSPUG00000017487	-	98	38.655	ENSPREG00000009215	rpp40	99	38.655	Poecilia_reticulata
ENSSPUG00000017487	-	99	66.111	ENSPPYG00000016194	RPP40	99	66.111	Pongo_abelii
ENSSPUG00000017487	-	50	65.027	ENSPCAG00000002700	-	98	65.027	Procavia_capensis
ENSSPUG00000017487	-	99	68.611	ENSPCOG00000003907	RPP40	99	68.611	Propithecus_coquereli
ENSSPUG00000017487	-	99	67.500	ENSPVAG00000011325	RPP40	99	67.500	Pteropus_vampyrus
ENSSPUG00000017487	-	83	37.624	ENSPNYG00000004432	rpp40	100	37.624	Pundamilia_nyererei
ENSSPUG00000017487	-	98	48.883	ENSPNAG00000019125	rpp40	99	48.883	Pygocentrus_nattereri
ENSSPUG00000017487	-	99	66.944	ENSRNOG00000016226	Rpp40	99	68.212	Rattus_norvegicus
ENSSPUG00000017487	-	99	66.352	ENSRBIG00000035800	RPP40	99	66.777	Rhinopithecus_bieti
ENSSPUG00000017487	-	99	66.352	ENSRROG00000039116	RPP40	99	66.352	Rhinopithecus_roxellana
ENSSPUG00000017487	-	99	64.780	ENSSBOG00000020297	RPP40	99	64.780	Saimiri_boliviensis_boliviensis
ENSSPUG00000017487	-	76	71.942	ENSSHAG00000002102	RPP40	100	71.942	Sarcophilus_harrisii
ENSSPUG00000017487	-	99	50.549	ENSSFOG00015001142	rpp40	82	50.549	Scleropages_formosus
ENSSPUG00000017487	-	98	39.216	ENSSDUG00000007202	rpp40	99	39.216	Seriola_dumerili
ENSSPUG00000017487	-	98	39.496	ENSSLDG00000017563	rpp40	99	39.496	Seriola_lalandi_dorsalis
ENSSPUG00000017487	-	98	39.496	ENSSPAG00000022716	rpp40	99	39.496	Stegastes_partitus
ENSSPUG00000017487	-	99	66.389	ENSSSCG00000000998	RPP40	99	68.000	Sus_scrofa
ENSSPUG00000017487	-	55	78.531	ENSTGUG00000015246	-	100	79.096	Taeniopygia_guttata
ENSSPUG00000017487	-	98	77.095	ENSTGUG00000002258	-	100	77.095	Taeniopygia_guttata
ENSSPUG00000017487	-	97	39.093	ENSTRUG00000003755	rpp40	98	39.093	Takifugu_rubripes
ENSSPUG00000017487	-	99	38.333	ENSTNIG00000003077	rpp40	99	38.333	Tetraodon_nigroviridis
ENSSPUG00000017487	-	69	49.600	ENSTBEG00000014467	-	73	49.600	Tupaia_belangeri
ENSSPUG00000017487	-	99	64.444	ENSTTRG00000007319	RPP40	99	64.444	Tursiops_truncatus
ENSSPUG00000017487	-	99	68.889	ENSUAMG00000002159	RPP40	99	70.530	Ursus_americanus
ENSSPUG00000017487	-	99	68.889	ENSUMAG00000018639	RPP40	93	68.889	Ursus_maritimus
ENSSPUG00000017487	-	80	48.805	ENSVPAG00000004652	-	99	48.805	Vicugna_pacos
ENSSPUG00000017487	-	99	69.167	ENSVVUG00000005451	RPP40	99	69.167	Vulpes_vulpes
ENSSPUG00000017487	-	99	55.556	ENSXETG00000017617	rpp40	99	55.556	Xenopus_tropicalis
ENSSPUG00000017487	-	58	47.573	ENSXCOG00000019991	-	80	32.632	Xiphophorus_couchianus
ENSSPUG00000017487	-	98	32.044	ENSXMAG00000024940	rpp40	98	32.320	Xiphophorus_maculatus