EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000017586 (Gene tree)
Gene ID: -
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 459056 bases
Position: chrQEPC01007955.1:36587-495642
Accession: 30646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000022953	SNase	PF00565.17	1.2e-46	1	3
ENSSPUP00000022953	SNase	PF00565.17	1.2e-46	2	3
ENSSPUP00000022953	SNase	PF00565.17	1.2e-46	3	3
ENSSPUP00000022948	SNase	PF00565.17	4.1e-46	1	3
ENSSPUP00000022948	SNase	PF00565.17	4.1e-46	2	3
ENSSPUP00000022948	SNase	PF00565.17	4.1e-46	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000024471	SND1-202	1806	-	ENSSPUP00000022953	601 (aa)	-	-
ENSSPUT00000024466	SND1-201	1881	-	ENSSPUP00000022948	626 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000017586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000017586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000017586	SND1	96	87.826	ENSG00000197157	SND1	73	87.826	Homo_sapiens
ENSSPUG00000017586	SND1	96	80.936	ENSAPOG00000017599	snd1	70	80.936	Acanthochromis_polyacanthus
ENSSPUG00000017586	SND1	96	87.652	ENSAMEG00000004664	SND1	69	87.652	Ailuropoda_melanoleuca
ENSSPUG00000017586	SND1	96	76.736	ENSACIG00000003551	snd1	69	76.736	Amphilophus_citrinellus
ENSSPUG00000017586	SND1	96	80.763	ENSAOCG00000014166	snd1	72	79.125	Amphiprion_ocellaris
ENSSPUG00000017586	SND1	96	80.763	ENSAPEG00000007067	snd1	70	80.763	Amphiprion_percula
ENSSPUG00000017586	SND1	96	80.936	ENSATEG00000018475	snd1	64	80.936	Anabas_testudineus
ENSSPUG00000017586	SND1	96	87.478	ENSANAG00000034463	SND1	75	87.197	Aotus_nancymaae
ENSSPUG00000017586	SND1	96	80.243	ENSACLG00000022897	snd1	70	80.243	Astatotilapia_calliptera
ENSSPUG00000017586	SND1	96	80.656	ENSAMXG00000016318	snd1	63	80.656	Astyanax_mexicanus
ENSSPUG00000017586	SND1	96	87.652	ENSBTAG00000010692	SND1	73	87.652	Bos_taurus
ENSSPUG00000017586	SND1	96	47.449	WBGene00006626	tsn-1	70	47.449	Caenorhabditis_elegans
ENSSPUG00000017586	SND1	96	87.826	ENSCJAG00000017668	SND1	75	87.543	Callithrix_jacchus
ENSSPUG00000017586	SND1	96	87.652	ENSCAFG00000001700	SND1	73	87.652	Canis_familiaris
ENSSPUG00000017586	SND1	96	87.652	ENSCAFG00020021639	SND1	73	87.652	Canis_lupus_dingo
ENSSPUG00000017586	SND1	96	87.847	ENSCHIG00000023390	SND1	74	87.847	Capra_hircus
ENSSPUG00000017586	SND1	97	86.542	ENSTSYG00000004979	SND1	98	86.542	Carlito_syrichta
ENSSPUG00000017586	SND1	96	75.731	ENSCAPG00000010677	SND1	65	75.731	Cavia_aperea
ENSSPUG00000017586	SND1	96	87.652	ENSCPOG00000006251	SND1	73	87.652	Cavia_porcellus
ENSSPUG00000017586	SND1	96	87.652	ENSCCAG00000036847	SND1	74	87.500	Cebus_capucinus
ENSSPUG00000017586	SND1	96	87.826	ENSCATG00000035214	SND1	75	87.522	Cercocebus_atys
ENSSPUG00000017586	SND1	96	87.826	ENSCLAG00000011796	SND1	93	87.695	Chinchilla_lanigera
ENSSPUG00000017586	SND1	96	87.826	ENSCSAG00000010182	SND1	73	87.826	Chlorocebus_sabaeus
ENSSPUG00000017586	SND1	86	97.222	ENSCHOG00000002218	SND1	66	97.222	Choloepus_hoffmanni
ENSSPUG00000017586	SND1	96	90.609	ENSCPBG00000018094	SND1	71	90.609	Chrysemys_picta_bellii
ENSSPUG00000017586	SND1	96	56.048	ENSCING00000000524	-	71	56.143	Ciona_intestinalis
ENSSPUG00000017586	SND1	96	57.241	ENSCSAVG00000008807	-	71	57.340	Ciona_savignyi
ENSSPUG00000017586	SND1	96	87.826	ENSCANG00000035119	SND1	73	87.826	Colobus_angolensis_palliatus
ENSSPUG00000017586	SND1	96	86.087	ENSCGRG00001022514	Snd1	94	85.962	Cricetulus_griseus_chok1gshd
ENSSPUG00000017586	SND1	96	86.087	ENSCGRG00000012277	Snd1	75	86.087	Cricetulus_griseus_crigri
ENSSPUG00000017586	SND1	96	81.282	ENSCSEG00000008661	snd1	72	81.282	Cynoglossus_semilaevis
ENSSPUG00000017586	SND1	97	80.782	ENSCVAG00000010316	snd1	71	81.105	Cyprinodon_variegatus
ENSSPUG00000017586	SND1	96	81.488	ENSDARG00000006766	snd1	93	83.365	Danio_rerio
ENSSPUG00000017586	SND1	96	84.348	ENSDNOG00000006795	SND1	75	84.348	Dasypus_novemcinctus
ENSSPUG00000017586	SND1	96	87.304	ENSDORG00000000336	Snd1	73	87.304	Dipodomys_ordii
ENSSPUG00000017586	SND1	96	50.250	FBgn0035121	Tudor-SN	73	50.250	Drosophila_melanogaster
ENSSPUG00000017586	SND1	96	61.391	ENSETEG00000000375	SND1	72	61.391	Echinops_telfairi
ENSSPUG00000017586	SND1	88	59.424	ENSEBUG00000014201	-	84	77.596	Eptatretus_burgeri
ENSSPUG00000017586	SND1	96	87.826	ENSEASG00005008513	SND1	73	85.448	Equus_asinus_asinus
ENSSPUG00000017586	SND1	96	87.826	ENSECAG00000011451	SND1	72	87.826	Equus_caballus
ENSSPUG00000017586	SND1	96	85.739	ENSEEUG00000014737	SND1	62	85.739	Erinaceus_europaeus
ENSSPUG00000017586	SND1	96	79.275	ENSELUG00000001805	snd1	60	79.275	Esox_lucius
ENSSPUG00000017586	SND1	96	87.826	ENSFCAG00000008289	SND1	75	87.826	Felis_catus
ENSSPUG00000017586	SND1	96	87.652	ENSFDAG00000015881	SND1	73	87.652	Fukomys_damarensis
ENSSPUG00000017586	SND1	97	80.272	ENSFHEG00000004093	snd1	73	80.272	Fundulus_heteroclitus
ENSSPUG00000017586	SND1	55	76.064	ENSGALG00000052684	-	50	74.227	Gallus_gallus
ENSSPUG00000017586	SND1	97	80.442	ENSGAFG00000008421	snd1	72	81.282	Gambusia_affinis
ENSSPUG00000017586	SND1	97	40.625	ENSGACG00000019793	snd1	74	40.625	Gasterosteus_aculeatus
ENSSPUG00000017586	SND1	96	87.826	ENSGGOG00000009614	SND1	75	87.543	Gorilla_gorilla
ENSSPUG00000017586	SND1	96	80.243	ENSHBUG00000019135	snd1	70	80.243	Haplochromis_burtoni
ENSSPUG00000017586	SND1	96	88.174	ENSHGLG00000003618	SND1	93	88.174	Heterocephalus_glaber_female
ENSSPUG00000017586	SND1	96	88.174	ENSHGLG00100012449	SND1	73	88.174	Heterocephalus_glaber_male
ENSSPUG00000017586	SND1	96	80.243	ENSHCOG00000005266	snd1	70	80.243	Hippocampus_comes
ENSSPUG00000017586	SND1	96	79.965	ENSIPUG00000013279	snd1	72	79.965	Ictalurus_punctatus
ENSSPUG00000017586	SND1	96	87.652	ENSSTOG00000002140	SND1	73	87.652	Ictidomys_tridecemlineatus
ENSSPUG00000017586	SND1	96	87.652	ENSJJAG00000009561	Snd1	73	87.652	Jaculus_jaculus
ENSSPUG00000017586	SND1	96	80.763	ENSKMAG00000016997	snd1	70	80.763	Kryptolebias_marmoratus
ENSSPUG00000017586	SND1	96	79.896	ENSLBEG00000013563	snd1	75	77.946	Labrus_bergylta
ENSSPUG00000017586	SND1	96	80.855	ENSLOCG00000015537	snd1	74	79.368	Lepisosteus_oculatus
ENSSPUG00000017586	SND1	96	87.826	ENSLAFG00000009696	SND1	73	87.826	Loxodonta_africana
ENSSPUG00000017586	SND1	96	87.826	ENSMFAG00000038114	SND1	75	87.522	Macaca_fascicularis
ENSSPUG00000017586	SND1	96	87.826	ENSMMUG00000015432	SND1	95	85.787	Macaca_mulatta
ENSSPUG00000017586	SND1	96	87.826	ENSMNEG00000039808	SND1	99	85.787	Macaca_nemestrina
ENSSPUG00000017586	SND1	96	87.826	ENSMLEG00000029040	SND1	99	85.787	Mandrillus_leucophaeus
ENSSPUG00000017586	SND1	96	80.936	ENSMAMG00000011739	snd1	70	80.936	Mastacembelus_armatus
ENSSPUG00000017586	SND1	96	80.243	ENSMZEG00005005681	snd1	71	80.243	Maylandia_zebra
ENSSPUG00000017586	SND1	96	87.826	ENSMICG00000000097	SND1	73	87.826	Microcebus_murinus
ENSSPUG00000017586	SND1	96	86.783	ENSMOCG00000005040	Snd1	73	86.783	Microtus_ochrogaster
ENSSPUG00000017586	SND1	96	79.723	ENSMMOG00000001795	snd1	72	78.114	Mola_mola
ENSSPUG00000017586	SND1	96	87.478	ENSMODG00000015182	SND1	70	87.478	Monodelphis_domestica
ENSSPUG00000017586	SND1	96	79.896	ENSMALG00000012071	snd1	71	79.896	Monopterus_albus
ENSSPUG00000017586	SND1	96	86.609	MGP_CAROLIEiJ_G0028159	Snd1	94	86.609	Mus_caroli
ENSSPUG00000017586	SND1	96	86.261	ENSMUSG00000001424	Snd1	94	86.135	Mus_musculus
ENSSPUG00000017586	SND1	96	86.609	MGP_PahariEiJ_G0021917	Snd1	95	86.609	Mus_pahari
ENSSPUG00000017586	SND1	96	86.609	MGP_SPRETEiJ_G0029159	Snd1	94	86.482	Mus_spretus
ENSSPUG00000017586	SND1	96	88.000	ENSMPUG00000006545	SND1	73	88.000	Mustela_putorius_furo
ENSSPUG00000017586	SND1	96	87.652	ENSMLUG00000017130	SND1	71	87.652	Myotis_lucifugus
ENSSPUG00000017586	SND1	96	87.130	ENSNGAG00000011186	Snd1	73	87.130	Nannospalax_galili
ENSSPUG00000017586	SND1	96	80.243	ENSNBRG00000006681	snd1	70	80.243	Neolamprologus_brichardi
ENSSPUG00000017586	SND1	96	87.826	ENSNLEG00000012263	SND1	94	87.826	Nomascus_leucogenys
ENSSPUG00000017586	SND1	86	97.222	ENSOPRG00000013405	SND1	58	97.222	Ochotona_princeps
ENSSPUG00000017586	SND1	96	87.826	ENSODEG00000011502	SND1	73	87.826	Octodon_degus
ENSSPUG00000017586	SND1	96	79.896	ENSONIG00000011481	snd1	68	79.896	Oreochromis_niloticus
ENSSPUG00000017586	SND1	96	88.715	ENSOANG00000000817	SND1	73	88.715	Ornithorhynchus_anatinus
ENSSPUG00000017586	SND1	96	86.783	ENSOCUG00000001620	SND1	73	86.783	Oryctolagus_cuniculus
ENSSPUG00000017586	SND1	96	81.109	ENSORLG00000015201	snd1	72	80.102	Oryzias_latipes
ENSSPUG00000017586	SND1	96	81.109	ENSORLG00020013991	snd1	71	81.109	Oryzias_latipes_hni
ENSSPUG00000017586	SND1	96	81.109	ENSORLG00015012436	snd1	70	81.109	Oryzias_latipes_hsok
ENSSPUG00000017586	SND1	96	80.243	ENSOMEG00000006406	snd1	70	80.243	Oryzias_melastigma
ENSSPUG00000017586	SND1	96	87.478	ENSOGAG00000013356	SND1	69	87.478	Otolemur_garnettii
ENSSPUG00000017586	SND1	96	87.826	ENSOARG00000002149	SND1	75	87.826	Ovis_aries
ENSSPUG00000017586	SND1	96	87.826	ENSPPAG00000042947	SND1	75	87.543	Pan_paniscus
ENSSPUG00000017586	SND1	96	87.826	ENSPPRG00000004494	SND1	73	87.826	Panthera_pardus
ENSSPUG00000017586	SND1	96	87.826	ENSPTIG00000014214	SND1	73	87.826	Panthera_tigris_altaica
ENSSPUG00000017586	SND1	96	87.826	ENSPTRG00000023911	SND1	75	87.543	Pan_troglodytes
ENSSPUG00000017586	SND1	96	87.826	ENSPANG00000011997	SND1	75	87.826	Papio_anubis
ENSSPUG00000017586	SND1	96	79.110	ENSPKIG00000023494	snd1	71	79.110	Paramormyrops_kingsleyae
ENSSPUG00000017586	SND1	93	78.750	ENSPMGG00000003629	snd1	74	78.750	Periophthalmus_magnuspinnatus
ENSSPUG00000017586	SND1	96	86.783	ENSPEMG00000010240	Snd1	73	86.783	Peromyscus_maniculatus_bairdii
ENSSPUG00000017586	SND1	96	74.567	ENSPMAG00000007915	-	72	74.740	Petromyzon_marinus
ENSSPUG00000017586	SND1	96	88.174	ENSPCIG00000011561	SND1	73	88.174	Phascolarctos_cinereus
ENSSPUG00000017586	SND1	97	80.272	ENSPFOG00000001557	snd1	71	80.272	Poecilia_formosa
ENSSPUG00000017586	SND1	97	80.442	ENSPLAG00000018459	snd1	69	80.442	Poecilia_latipinna
ENSSPUG00000017586	SND1	97	80.442	ENSPMEG00000006803	snd1	71	80.442	Poecilia_mexicana
ENSSPUG00000017586	SND1	97	80.442	ENSPREG00000002189	snd1	72	80.442	Poecilia_reticulata
ENSSPUG00000017586	SND1	96	87.652	ENSPPYG00000017972	SND1	79	87.652	Pongo_abelii
ENSSPUG00000017586	SND1	97	94.444	ENSPCAG00000011305	SND1	68	94.444	Procavia_capensis
ENSSPUG00000017586	SND1	97	87.009	ENSPCOG00000026791	SND1	92	87.009	Propithecus_coquereli
ENSSPUG00000017586	SND1	96	85.565	ENSPVAG00000013945	SND1	73	85.565	Pteropus_vampyrus
ENSSPUG00000017586	SND1	96	80.243	ENSPNYG00000000932	snd1	70	80.243	Pundamilia_nyererei
ENSSPUG00000017586	SND1	96	80.829	ENSPNAG00000001206	snd1	72	80.829	Pygocentrus_nattereri
ENSSPUG00000017586	SND1	96	86.609	ENSRNOG00000031173	Snd1	75	85.913	Rattus_norvegicus
ENSSPUG00000017586	SND1	87	89.038	ENSRBIG00000027782	-	93	88.932	Rhinopithecus_bieti
ENSSPUG00000017586	SND1	96	87.826	ENSRROG00000033020	SND1	73	87.826	Rhinopithecus_roxellana
ENSSPUG00000017586	SND1	97	86.667	ENSSBOG00000032461	SND1	95	85.787	Saimiri_boliviensis_boliviensis
ENSSPUG00000017586	SND1	96	83.652	ENSSHAG00000015359	SND1	75	83.652	Sarcophilus_harrisii
ENSSPUG00000017586	SND1	96	79.145	ENSSFOG00015001103	snd1	72	79.145	Scleropages_formosus
ENSSPUG00000017586	SND1	96	80.416	ENSSMAG00000001932	snd1	66	80.416	Scophthalmus_maximus
ENSSPUG00000017586	SND1	96	81.109	ENSSDUG00000002699	snd1	67	79.932	Seriola_dumerili
ENSSPUG00000017586	SND1	96	73.830	ENSSLDG00000001950	snd1	62	72.789	Seriola_lalandi_dorsalis
ENSSPUG00000017586	SND1	96	81.043	ENSSARG00000004877	SND1	78	81.043	Sorex_araneus
ENSSPUG00000017586	SND1	96	80.382	ENSSPAG00000021398	snd1	94	80.382	Stegastes_partitus
ENSSPUG00000017586	SND1	96	87.478	ENSSSCG00000016590	SND1	73	87.478	Sus_scrofa
ENSSPUG00000017586	SND1	97	83.529	ENSTRUG00000014067	snd1	72	77.685	Takifugu_rubripes
ENSSPUG00000017586	SND1	96	80.416	ENSTNIG00000011019	snd1	97	78.691	Tetraodon_nigroviridis
ENSSPUG00000017586	SND1	97	100.000	ENSTBEG00000003999	SND1	61	100.000	Tupaia_belangeri
ENSSPUG00000017586	SND1	96	81.391	ENSTTRG00000006059	SND1	73	81.391	Tursiops_truncatus
ENSSPUG00000017586	SND1	86	81.106	ENSUAMG00000005604	-	54	81.106	Ursus_americanus
ENSSPUG00000017586	SND1	60	81.717	ENSUAMG00000002820	-	83	81.717	Ursus_americanus
ENSSPUG00000017586	SND1	96	87.652	ENSUMAG00000005960	SND1	73	87.652	Ursus_maritimus
ENSSPUG00000017586	SND1	96	77.565	ENSVPAG00000008302	SND1	63	77.565	Vicugna_pacos
ENSSPUG00000017586	SND1	96	87.478	ENSVVUG00000007226	SND1	73	87.478	Vulpes_vulpes
ENSSPUG00000017586	SND1	96	84.522	ENSXETG00000023043	snd1	77	84.522	Xenopus_tropicalis
ENSSPUG00000017586	SND1	93	80.714	ENSXCOG00000013629	snd1	74	80.714	Xiphophorus_couchianus
ENSSPUG00000017586	SND1	97	80.442	ENSXMAG00000011469	snd1	71	80.442	Xiphophorus_maculatus