EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000017677 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 38385 bases
Position: chrQEPC01010294.1:3147207-3185591
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000023032	MMR_HSR1	PF01926.23	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000024559	-	1832	-	ENSSPUP00000023032	206 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000017677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000017677's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000017677	-	80	47.879	ENSSPUG00000010896	-	80	47.879
ENSSPUG00000017677	-	84	40.571	ENSSPUG00000010337	RAB42	77	41.212
ENSSPUG00000017677	-	84	44.828	ENSSPUG00000002526	-	80	44.828
ENSSPUG00000017677	-	78	45.963	ENSSPUG00000002555	RAB25	79	46.541
ENSSPUG00000017677	-	81	32.530	ENSSPUG00000005243	HRAS	87	32.530
ENSSPUG00000017677	-	86	38.547	ENSSPUG00000003439	RAB31	90	38.547
ENSSPUG00000017677	-	70	45.578	ENSSPUG00000005574	RAB33A	64	45.578
ENSSPUG00000017677	-	83	38.596	ENSSPUG00000001533	-	79	38.596
ENSSPUG00000017677	-	87	43.407	ENSSPUG00000012950	-	85	42.703
ENSSPUG00000017677	-	72	34.000	ENSSPUG00000007384	RAP2B	87	34.783
ENSSPUG00000017677	-	88	37.297	ENSSPUG00000017531	RAB9B	89	37.297
ENSSPUG00000017677	-	93	44.845	ENSSPUG00000012822	RAB1A	79	50.617
ENSSPUG00000017677	-	84	48.276	ENSSPUG00000016258	RAB35	86	48.276
ENSSPUG00000017677	-	82	46.154	ENSSPUG00000000617	RAB15	79	45.882
ENSSPUG00000017677	-	59	40.164	ENSSPUG00000015409	RAB17	56	40.164
ENSSPUG00000017677	-	87	47.253	ENSSPUG00000003222	RAB12	75	46.774
ENSSPUG00000017677	-	88	39.130	ENSSPUG00000000552	RAB39B	86	39.130
ENSSPUG00000017677	-	77	33.750	ENSSPUG00000016774	RRAS2	92	33.918
ENSSPUG00000017677	-	88	38.798	ENSSPUG00000017301	RAB6A	86	38.798
ENSSPUG00000017677	-	80	33.537	ENSSPUG00000018789	-	87	33.537
ENSSPUG00000017677	-	56	32.787	ENSSPUG00000018772	ARL14	57	32.787
ENSSPUG00000017677	-	79	49.390	ENSSPUG00000018803	RAB14	71	49.390
ENSSPUG00000017677	-	77	47.500	ENSSPUG00000013698	RAB11A	78	47.500
ENSSPUG00000017677	-	80	36.145	ENSSPUG00000017750	MRAS	79	36.145
ENSSPUG00000017677	-	92	44.737	ENSSPUG00000002243	-	82	45.405
ENSSPUG00000017677	-	79	38.922	ENSSPUG00000004262	RAB7A	81	38.922
ENSSPUG00000017677	-	93	39.698	ENSSPUG00000014873	RAB5B	88	40.000
ENSSPUG00000017677	-	93	45.876	ENSSPUG00000007945	RAB1B	80	50.617
ENSSPUG00000017677	-	95	31.220	ENSSPUG00000014551	RAB36	76	33.721
ENSSPUG00000017677	-	70	34.899	ENSSPUG00000018361	RHEB	84	34.899
ENSSPUG00000017677	-	88	32.787	ENSSPUG00000008958	NRAS	96	32.787
ENSSPUG00000017677	-	78	45.062	ENSSPUG00000001173	RAB5A	85	44.242
ENSSPUG00000017677	-	87	48.370	ENSSPUG00000010112	RAB2B	83	48.370
ENSSPUG00000017677	-	99	33.178	ENSSPUG00000006274	RAB23	72	36.047
ENSSPUG00000017677	-	78	40.964	ENSSPUG00000008120	RAB33B	71	40.964
ENSSPUG00000017677	-	80	32.317	ENSSPUG00000003341	-	88	32.317
ENSSPUG00000017677	-	80	38.690	ENSSPUG00000003459	-	84	38.690
ENSSPUG00000017677	-	80	38.095	ENSSPUG00000013564	-	84	38.095
ENSSPUG00000017677	-	81	42.857	ENSSPUG00000000017	RAB22A	87	42.604
ENSSPUG00000017677	-	82	47.929	ENSSPUG00000006349	RAB30	83	47.929

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000017677	-	100	86.893	ENSAPOG00000010760	rab18a	93	89.418	Acanthochromis_polyacanthus
ENSSPUG00000017677	-	100	75.728	ENSACIG00000009617	rab18a	92	77.249	Amphilophus_citrinellus
ENSSPUG00000017677	-	100	86.408	ENSAOCG00000016233	rab18a	93	88.889	Amphiprion_ocellaris
ENSSPUG00000017677	-	100	86.408	ENSAPEG00000005392	rab18a	93	88.889	Amphiprion_percula
ENSSPUG00000017677	-	100	87.864	ENSATEG00000021911	rab18a	93	90.476	Anabas_testudineus
ENSSPUG00000017677	-	100	94.175	ENSACAG00000005463	-	94	95.833	Anolis_carolinensis
ENSSPUG00000017677	-	100	85.922	ENSACLG00000011484	rab18a	93	88.360	Astatotilapia_calliptera
ENSSPUG00000017677	-	100	96.117	ENSCPBG00000015839	-	100	96.117	Chrysemys_picta_bellii
ENSSPUG00000017677	-	96	71.500	ENSCPBG00000027619	-	93	73.797	Chrysemys_picta_bellii
ENSSPUG00000017677	-	97	76.000	ENSCING00000006838	-	95	78.836	Ciona_intestinalis
ENSSPUG00000017677	-	97	74.000	ENSCSAVG00000010348	-	95	76.720	Ciona_savignyi
ENSSPUG00000017677	-	100	87.864	ENSCSEG00000011816	rab18a	93	91.005	Cynoglossus_semilaevis
ENSSPUG00000017677	-	92	88.947	ENSCVAG00000015451	rab18a	93	89.418	Cyprinodon_variegatus
ENSSPUG00000017677	-	100	82.039	ENSDARG00000055291	rab18a	94	83.854	Danio_rerio
ENSSPUG00000017677	-	100	89.806	ENSELUG00000003805	rab18a	94	92.188	Esox_lucius
ENSSPUG00000017677	-	92	88.947	ENSFHEG00000019455	rab18a	93	89.418	Fundulus_heteroclitus
ENSSPUG00000017677	-	92	88.421	ENSGAFG00000002790	rab18a	93	88.889	Gambusia_affinis
ENSSPUG00000017677	-	100	95.631	ENSGAGG00000015642	-	100	95.631	Gopherus_agassizii
ENSSPUG00000017677	-	100	85.922	ENSHBUG00000001518	rab18a	93	88.360	Haplochromis_burtoni
ENSSPUG00000017677	-	99	87.317	ENSLBEG00000005861	rab18a	89	89.418	Labrus_bergylta
ENSSPUG00000017677	-	93	96.875	ENSLACG00000009310	rab18a	93	96.875	Latimeria_chalumnae
ENSSPUG00000017677	-	100	92.718	ENSLOCG00000007491	rab18a	94	94.792	Lepisosteus_oculatus
ENSSPUG00000017677	-	100	87.379	ENSMAMG00000014320	rab18a	93	90.476	Mastacembelus_armatus
ENSSPUG00000017677	-	100	85.437	ENSMZEG00005017235	rab18a	93	88.360	Maylandia_zebra
ENSSPUG00000017677	-	100	87.864	ENSMALG00000009813	rab18a	93	90.476	Monopterus_albus
ENSSPUG00000017677	-	100	85.922	ENSNBRG00000013507	rab18a	93	88.360	Neolamprologus_brichardi
ENSSPUG00000017677	-	92	87.368	ENSORLG00000004624	rab18a	93	87.831	Oryzias_latipes
ENSSPUG00000017677	-	92	87.895	ENSORLG00020008333	rab18a	93	88.360	Oryzias_latipes_hni
ENSSPUG00000017677	-	92	87.368	ENSORLG00015004739	rab18a	93	87.831	Oryzias_latipes_hsok
ENSSPUG00000017677	-	92	87.368	ENSOMEG00000020605	rab18a	93	87.831	Oryzias_melastigma
ENSSPUG00000017677	-	100	89.806	ENSPKIG00000009825	rab18a	93	91.623	Paramormyrops_kingsleyae
ENSSPUG00000017677	-	100	85.922	ENSPMGG00000020409	-	93	87.831	Periophthalmus_magnuspinnatus
ENSSPUG00000017677	-	92	88.421	ENSPFOG00000007571	rab18a	93	88.889	Poecilia_formosa
ENSSPUG00000017677	-	92	88.421	ENSPLAG00000010104	rab18a	93	88.889	Poecilia_latipinna
ENSSPUG00000017677	-	92	88.421	ENSPMEG00000013085	rab18a	93	88.889	Poecilia_mexicana
ENSSPUG00000017677	-	92	88.889	ENSPREG00000005923	rab18a	77	88.889	Poecilia_reticulata
ENSSPUG00000017677	-	100	85.922	ENSPNYG00000007064	rab18a	93	88.360	Pundamilia_nyererei
ENSSPUG00000017677	-	99	82.266	ENSPNAG00000011548	rab18a	95	85.789	Pygocentrus_nattereri
ENSSPUG00000017677	-	100	90.777	ENSSFOG00015017444	rab18a	79	92.708	Scleropages_formosus
ENSSPUG00000017677	-	92	89.529	ENSSMAG00000002969	rab18a	93	90.000	Scophthalmus_maximus
ENSSPUG00000017677	-	92	90.000	ENSSDUG00000003823	rab18a	93	90.476	Seriola_dumerili
ENSSPUG00000017677	-	92	90.000	ENSSLDG00000006977	rab18a	93	90.476	Seriola_lalandi_dorsalis
ENSSPUG00000017677	-	100	85.437	ENSTRUG00000004984	rab18a	93	87.368	Takifugu_rubripes
ENSSPUG00000017677	-	100	94.175	ENSUMAG00000015574	-	100	94.175	Ursus_maritimus
ENSSPUG00000017677	-	100	91.748	ENSXETG00000004556	rab18	92	94.737	Xenopus_tropicalis
ENSSPUG00000017677	-	92	88.947	ENSXMAG00000024122	rab18a	93	89.418	Xiphophorus_maculatus